Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17576 Striga asiatica HOM05D001356 ORTHO05D008843 6.8e-57 223.8 114 100.0
SGA_v2.0_scaffold70G23388 Striga asiatica HOM05D001356 ORTHO05D008843 3.3e-19 98.6 93 60.2
Lj8E130T2 Lonicera japonica HOM05D001356 ORTHO05D008843 4.3e-19 98.2 100 54.0
Migut.M00424 Erythranthe guttata HOM05D001356 ORTHO05D008843 1.3e-18 96.7 132 44.7
CSS0027248 Camellia sinensis var. sinensis HOM05D001356 ORTHO05D008843 3.6e-18 95.1 100 52.0
Cc05_g02940 Coffea canephora HOM05D001356 ORTHO05D008843 1.4e-17 93.2 121 43.8
Migut.H01239 Erythranthe guttata HOM05D001356 ORTHO05D008843 1.4e-17 93.2 100 51.0
TAR020G0002 Trochodendron aralioides HOM05D001356 ORTHO05D008843 1.8e-17 92.8 117 46.2
SGA_v2.0_scaffold34G13759 Striga asiatica HOM05D001356 ORTHO05D008843 3.1e-17 92.0 100 52.0
SalBow7G4227 Salvia bowleyana HOM05D001356 ORTHO05D008843 9.0e-17 90.5 100 52.0
MSTRG.14135 Avicennia marina HOM05D001356 ORTHO05D008843 1.2e-16 90.1 99 50.5
Cpa.g.sc132.23 Carica papaya HOM05D001356 ORTHO05D008843 1.2e-16 90.1 121 43.8
Prupe.3G210100 Prunus persica HOM05D001356 ORTHO05D008843 1.2e-16 90.1 122 43.4
TAR629G2076 Trochodendron aralioides HOM05D001356 ORTHO05D008843 1.5e-16 89.7 115 43.5
MELO3C014434.2 Cucumis melo HOM05D001356 ORTHO05D008843 2.0e-16 89.4 121 42.1
Manes.12G069600 Manihot esculenta HOM05D001356 ORTHO05D008843 3.4e-16 88.6 100 49.0
Hma1.2p1_0177F.1_g078080 Hydrangea macrophylla HOM05D001356 ORTHO05D008843 4.5e-16 88.2 117 43.6
CsaV3_6G037750 Cucumis sativus L. HOM05D001356 ORTHO05D008843 5.8e-16 87.8 121 41.3
TWI36G0748 Tripterygium wilfordii HOM05D001356 ORTHO05D008843 5.8e-16 87.8 121 41.3
MD09G1114400 Malus domestica HOM05D001356 ORTHO05D008843 7.6e-16 87.4 122 42.6
Rhsim04G0050300 Rhododendron simsii HOM05D001356 ORTHO05D008843 7.6e-16 87.4 100 49.0
Solyc07g049390.3 Solanum lycopersicum HOM05D001356 ORTHO05D008843 7.6e-16 87.4 120 42.5
Sopen07g024730 Solanum pennellii HOM05D001356 ORTHO05D008843 7.6e-16 87.4 120 42.5
Thecc.01G182300 Theobroma cacao HOM05D001356 ORTHO05D008843 1.3e-15 86.7 100 50.0
Nitab4.5_0000482g0290 Nicotiana tabacum HOM05D001356 ORTHO05D008843 1.7e-15 86.3 120 42.5
QL08p030667 Quercus lobata HOM05D001356 ORTHO05D008843 2.2e-15 85.9 121 41.3
COL.COLO4_21880 Corchorus olitorius HOM05D001356 ORTHO05D008843 2.9e-15 85.5 121 42.1
MD17G1106100 Malus domestica HOM05D001356 ORTHO05D008843 2.9e-15 85.5 122 41.8
RcHm_v2.0_Chr2g0158031 Rosa chinensis HOM05D001356 ORTHO05D008843 2.9e-15 85.5 100 47.0
Actinidia10799 Actinidia chinensis HOM05D001356 ORTHO05D008843 3.8e-15 85.1 100 47.0
Ciclev10014736m.g Citrus clementina HOM05D001356 ORTHO05D008843 3.8e-15 85.1 121 40.5
CAN.G735.1 Capsicum annuum HOM05D001356 ORTHO05D008843 4.9e-15 84.7 120 40.8
Peaxi162Scf00921g00217 Petunia axillaris HOM05D001356 ORTHO05D008843 4.9e-15 84.7 120 41.7
CANSAT64G2058 Cannabis sativa HOM05D001356 ORTHO05D008843 6.4e-15 84.3 121 40.5
Gohir.A11G152900 Gossypium hirsutum HOM05D001356 ORTHO05D008843 6.4e-15 84.3 126 41.3
PGSC0003DMG400000663 Solanum tuberosum HOM05D001356 ORTHO05D008843 6.4e-15 84.3 120 40.8
FvH4_6g42120 Fragaria vesca HOM05D001356 ORTHO05D008843 8.4e-15 84.0 100 47.0
Aqoxy1G04183 Aquilegia oxysepala HOM05D001356 ORTHO05D008843 1.1e-14 83.6 121 38.8
MSTRG.14860 Avicennia marina HOM05D001356 ORTHO05D008843 1.1e-14 83.6 100 45.0
Duzib133G0533 Durio zibethinus HOM05D001356 ORTHO05D008843 1.9e-14 82.8 121 41.3
Duzib138G0129 Durio zibethinus HOM05D001356 ORTHO05D008843 2.4e-14 82.4 100 47.0
HanXRQChr10g0305911 Helianthus annuus HOM05D001356 ORTHO05D008843 3.2e-14 82.0 121 41.3
SalBow1G7783 Salvia bowleyana HOM05D001356 ORTHO05D008843 3.2e-14 82.0 100 45.0
Lsat_1_v5_gn_5_124581 Lactuca sativa HOM05D001356 ORTHO05D008843 4.2e-14 81.6 101 46.5
SalBow1G8237 Salvia bowleyana HOM05D001356 ORTHO05D008843 5.4e-14 81.3 100 45.0
DCAR_021139 Daucus carota HOM05D001356 ORTHO05D008843 7.1e-14 80.9 100 45.0
Atru.chr6.3257 Acer truncatum HOM05D001356 ORTHO05D008843 1.2e-13 80.1 126 36.5
Cfa014318 Carpinus fangiana HOM05D001356 ORTHO05D008843 1.2e-13 80.1 125 41.6
Sed0009631 Sechium edule HOM05D001356 ORTHO05D008843 1.2e-13 80.1 121 38.8
Gohir.D07G193900 Gossypium hirsutum HOM05D001356 ORTHO05D008843 1.6e-13 79.7 100 46.0
Haze_12766 Corylus avellana HOM05D001356 ORTHO05D008843 2.7e-13 79.0 125 40.8
Oeu017976.1 Olea europaea HOM05D001356 ORTHO05D008843 2.7e-13 79.0 100 43.0
Lsat_1_v5_gn_9_105840 Lactuca sativa HOM05D001356 ORTHO05D008843 4.6e-13 78.2 113 45.1
PSO478G0337 Papaver somniferum HOM05D001356 ORTHO05D008843 4.6e-13 78.2 122 40.2
PSO782G5226 Papaver somniferum HOM05D001356 ORTHO05D008843 4.6e-13 78.2 122 40.2
THA.LOC104809646 Tarenaya hassleriana HOM05D001356 ORTHO05D008843 4.6e-13 78.2 101 44.6
Potri.002G224400 Populus trichocarpa HOM05D001356 ORTHO05D008843 6.0e-13 77.8 100 45.0
Sabra14G0120500 Salix brachista HOM05D001356 ORTHO05D008843 6.0e-13 77.8 100 47.0
Sc06g0009660 Simmondsia chinensis HOM05D001356 ORTHO05D008843 6.0e-13 77.8 97 48.5
Potri.014G158700 Populus trichocarpa HOM05D001356 ORTHO05D008843 7.9e-13 77.4 100 47.0
ECA234G1829 Erigeron canadensis HOM05D001356 ORTHO05D008843 1.0e-12 77.0 100 42.0
unitig_52.g17332 Utricularia gibba HOM05D001356 ORTHO05D008843 1.0e-12 77.0 100 44.0
Eucgr.K00753 Eucalyptus grandis HOM05D001356 ORTHO05D008843 1.3e-12 76.6 121 35.5
DCAR_012919 Daucus carota HOM05D003710 ORTHO05D008843 1.8e-12 76.3 101 44.6
SGA_v2.0_scaffold159G37557 Striga asiatica HOM05D001356 ORTHO05D008843 1.8e-12 76.3 100 43.0
SEGI_04334 Sequoiadendron giganteum HOM05D001356 ORTHO05D008843 6.7e-12 74.3 96 40.6
PGR142G3726 Punica granatum HOM05D001356 ORTHO05D008843 3.3e-11 72.0 100 42.0
Gohir.D11G159700 Gossypium hirsutum HOM05D001356 ORTHO05D008843 1.3e-10 70.1 126 36.5
unitig_26.g9927 Utricularia gibba HOM05D001356 ORTHO05D008843 1.3e-10 70.1 100 41.0
Aa31sc209G100 Aethionema arabicum HOM05D001356 ORTHO05D008843 1.6e-10 69.7 122 33.6
FAN02G0691 Fragaria x ananassa HOM05D001356 ORTHO05D008843 2.1e-10 69.3 88 46.6
Gorai.007G170300 Gossypium raimondii HOM05D001356 ORTHO05D008843 2.1e-10 69.3 126 36.5
Carub.0003s2704 Capsella rubella HOM05D001356 ORTHO05D008843 2.8e-10 68.9 124 37.1
unitig_62.g23232 Utricularia gibba HOM05D000684 ORTHO05D000688 4.8e-10 68.2 90 44.4
Os09g0135800 Oryza sativa ssp. japonica HOM05D001356 ORTHO05D008843 8.1e-10 67.4 99 40.4
CDE07G0722 Ceratophyllum demersum HOM05D001356 ORTHO05D008843 2.4e-09 65.9 120 33.3
CiPaw.03G155100 Carya illinoinensis HOM05D001356 ORTHO05D008843 5.3e-09 64.7 124 35.5
AL3G43340 Arabidopsis lyrata HOM05D001356 ORTHO05D008843 9.0e-09 63.9 100 42.0
CDE04G1606 Ceratophyllum demersum HOM05D001356 ORTHO05D008843 1.2e-08 63.5 120 32.5
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 2.0e-08 62.8 109 40.4
CARHR103390 Cardamine hirsuta HOM05D001356 ORTHO05D008843 3.4e-08 62.0 123 35.0
FAN05G2749 Fragaria x ananassa HOM05D001356 ORTHO05D008843 3.4e-08 62.0 82 45.1
FAN14G2477 Fragaria x ananassa HOM05D001356 ORTHO05D008843 3.4e-08 62.0 82 45.1
ATR0178G015 Amborella trichopoda HOM05D001356 ORTHO05D008843 7.6e-08 60.8 98 34.7
AT2G05810 Arabidopsis thaliana HOM05D001356 ORTHO05D008843 9.9e-08 60.5 101 42.6
Glyma.07G078200 Glycine max HOM05D001356 ORTHO05D003895 1.3e-07 60.1 93 35.5
Zm00001eb095530 Zea mays HOM05D001356 ORTHO05D008843 2.2e-07 59.3 100 38.0
Ca_07863_v3 Cicer arietinum L. HOM05D001356 ORTHO05D003895 3.8e-07 58.5 95 34.7
Dinv02290 Davidia involucrata HOM05D001356 ORTHO05D008843 3.8e-07 58.5 81 45.7
Glyma.03G017100 Glycine max HOM05D001356 ORTHO05D003895 6.4e-07 57.8 93 34.4
Os10g0522601 Oryza sativa ssp. japonica HOM05D001356 ORTHO05D003895 8.4e-07 57.4 93 34.4
VMungo0331G1950 Vigna mungo HOM05D001356 ORTHO05D003895 8.4e-07 57.4 93 33.3
Eucgr.D02240 Eucalyptus grandis HOM05D001356 ORTHO05D003895 1.1e-06 57.0 96 36.5
Gorai.004G156500 Gossypium raimondii HOM05D001356 ORTHO05D003895 1.1e-06 57.0 95 34.7
Sc02g0002200 Simmondsia chinensis HOM05D001356 ORTHO05D003895 1.1e-06 57.0 95 35.8
Peaxi162Scf00021g00064 Petunia axillaris HOM05D001356 ORTHO05D003895 1.4e-06 56.6 101 34.7
Ca_23764_v3 Cicer arietinum L. HOM05D001356 ORTHO05D003895 1.9e-06 56.2 104 29.8
Rhsim01G0154600 Rhododendron simsii HOM05D001356 ORTHO05D003895 1.9e-06 56.2 93 35.5
Gohir.D08G150800 Gossypium hirsutum HOM05D001356 ORTHO05D003895 2.4e-06 55.8 95 34.7
Phvul.010G092100 Phaseolus vulgaris HOM05D001356 ORTHO05D003895 2.4e-06 55.8 93 33.3
CANSAT56G1460 Cannabis sativa HOM05D001356 ORTHO05D003895 3.2e-06 55.5 93 33.3
TWI23G0836 Tripterygium wilfordii HOM05D001356 ORTHO05D003895 3.2e-06 55.5 101 33.7
vmacro20969 Vaccinium macrocarpon HOM05D001356 ORTHO05D003895 3.2e-06 55.5 93 35.5
VMungo1383G0510 Vigna mungo HOM05D001356 ORTHO05D003895 3.2e-06 55.5 95 33.7
Lj3g0011074 Lotus japonicus HOM05D001356 ORTHO05D003895 4.2e-06 55.1 95 31.6
Lalb_Chr10g0097491 Lupinus albus HOM05D001356 ORTHO05D003895 4.2e-06 55.1 95 32.6
TAR375G0524 Trochodendron aralioides HOM05D001356 ORTHO05D003895 4.2e-06 55.1 93 34.4
Zm00001eb021400 Zea mays HOM05D001356 ORTHO05D003895 4.2e-06 55.1 93 34.4
COL.COLO4_12620 Corchorus olitorius HOM05D001356 ORTHO05D003895 5.5e-06 54.7 95 34.7
Haze_15221 Corylus avellana HOM05D001356 ORTHO05D003895 5.5e-06 54.7 93 33.3
Duzib138G0708 Durio zibethinus HOM05D001356 ORTHO05D003895 5.5e-06 54.7 95 33.7
Glyma.18G227400 Glycine max HOM05D001356 ORTHO05D003895 5.5e-06 54.7 95 31.6
Phvul.008G071700 Phaseolus vulgaris HOM05D001356 ORTHO05D003895 5.5e-06 54.7 95 32.6
TAR629G0250 Trochodendron aralioides HOM05D001356 ORTHO05D003895 5.5e-06 54.7 98 33.7
Dinv32426 Davidia involucrata HOM05D001356 ORTHO05D003895 7.1e-06 54.3 101 32.7
Psat3g113240 Pisum sativum HOM05D001356 ORTHO05D003895 7.1e-06 54.3 95 33.7
Atru.chr5.408 Acer truncatum HOM05D001356 ORTHO05D003895 9.3e-06 53.9 93 33.3
Actinidia12727 Actinidia chinensis HOM05D001356 ORTHO05D003895 9.3e-06 53.9 99 32.3
Nitab4.5_0004550g0060 Nicotiana tabacum HOM05D001356 ORTHO05D003895 9.3e-06 53.9 98 32.7
HPP92_016552 Vanilla planifolia HOM05D003710 ORTHO05D005250 9.3e-06 53.9 111 27.9


User provided reference genes

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