Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 1.5e-110 402.9 203 100.0
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 6.9e-52 208.0 133 81.2
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 2.0e-51 206.5 133 78.9
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 1.9e-49 199.9 135 76.3
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 4.6e-48 195.3 133 74.4
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 2.3e-47 193.0 134 77.6
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 6.6e-47 191.4 133 75.2
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.9e-46 189.9 134 74.6
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 1.9e-46 189.9 134 74.6
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 3.3e-46 189.1 134 73.9
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 4.3e-46 188.7 134 76.9
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 4.3e-46 188.7 134 73.9
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 7.3e-46 188.0 133 75.2
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.8e-45 186.0 133 71.4
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 3.6e-45 185.7 133 72.2
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 8.1e-45 184.5 134 72.4
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 1.4e-44 183.7 133 72.2
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.4e-44 183.7 133 70.7
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.8e-44 183.3 135 71.9
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 2.4e-44 183.0 128 72.7
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 2.4e-44 183.0 134 74.6
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 3.1e-44 182.6 134 75.4
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 3.1e-44 182.6 133 70.7
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 4.0e-44 182.2 116 76.7
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 5.3e-44 181.8 133 72.9
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 5.3e-44 181.8 133 68.4
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 5.3e-44 181.8 133 72.2
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 6.9e-44 181.4 134 73.9
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 1.2e-43 180.6 133 69.2
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.2e-43 180.6 133 71.4
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 1.2e-43 180.6 133 71.4
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 2.6e-43 179.5 133 70.7
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 3.4e-43 179.1 134 69.4
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 3.4e-43 179.1 133 69.9
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 3.4e-43 179.1 134 72.4
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 3.4e-43 179.1 132 70.5
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 4.5e-43 178.7 134 71.6
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 5.8e-43 178.3 133 74.4
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 7.6e-43 177.9 133 69.2
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 7.6e-43 177.9 134 73.1
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 7.6e-43 177.9 134 73.9
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 7.6e-43 177.9 133 68.4
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.3e-42 177.2 136 70.6
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 1.7e-42 176.8 133 70.7
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.2e-42 176.4 133 70.7
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 2.2e-42 176.4 133 68.4
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 2.2e-42 176.4 133 68.4
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 2.2e-42 176.4 133 68.4
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 2.2e-42 176.4 133 68.4
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 3.8e-42 175.6 161 60.2
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 4.9e-42 175.3 133 69.9
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 4.9e-42 175.3 133 69.9
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 6.4e-42 174.9 134 67.9
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 1.1e-41 174.1 133 69.2
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 1.9e-41 173.3 133 70.7
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 1.9e-41 173.3 133 72.2
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.4e-41 172.9 134 72.4
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 3.2e-41 172.6 133 69.2
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 3.2e-41 172.6 113 77.9
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 3.2e-41 172.6 129 73.6
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 3.2e-41 172.6 133 68.4
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 4.2e-41 172.2 140 70.0
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 4.2e-41 172.2 133 68.4
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 4.2e-41 172.2 133 68.4
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 5.5e-41 171.8 135 67.4
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 5.5e-41 171.8 141 68.8
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.5e-41 171.8 141 68.8
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 9.3e-41 171.0 133 68.4
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 9.3e-41 171.0 119 75.6
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 9.3e-41 171.0 134 67.9
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.3e-41 171.0 141 68.1
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.3e-41 171.0 141 68.1
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-40 170.6 140 68.6
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-40 170.6 140 68.6
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.2e-40 170.6 133 68.4
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 1.2e-40 170.6 134 67.2
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 1.6e-40 170.2 133 69.2
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.6e-40 170.2 140 68.6
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.6e-40 170.2 107 80.4
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 2.7e-40 169.5 129 70.5
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 2.7e-40 169.5 133 69.2
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.5e-40 169.1 140 67.9
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 4.6e-40 168.7 133 67.7
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.6e-40 168.7 133 67.7
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 6.0e-40 168.3 134 66.4
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 7.9e-40 167.9 134 65.7
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.0e-39 167.5 141 68.1
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 1.0e-39 167.5 131 66.4
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 1.3e-39 167.2 139 67.6
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.8e-39 166.8 135 68.1
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 2.3e-39 166.4 122 71.3
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.3e-39 166.4 137 69.3
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 3.0e-39 166.0 116 70.7
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 3.9e-39 165.6 116 70.7
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 8.7e-39 164.5 128 69.5
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.1e-38 164.1 133 66.9
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.1e-38 164.1 133 66.9
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 7.4e-38 161.4 103 78.6
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 9.6e-38 161.0 133 63.2
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 1.3e-37 160.6 119 71.4
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 4.8e-37 158.7 119 72.3
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 4.8e-37 158.7 119 72.3
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 4.8e-37 158.7 119 72.3
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 4.8e-37 158.7 119 72.3
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 4.8e-37 158.7 119 69.7
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 1.8e-36 156.8 133 65.4
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 4.0e-36 155.6 99 81.8
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 6.9e-36 154.8 110 73.6
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 4.5e-35 152.1 119 68.9
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 7.6e-35 151.4 127 63.0
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 1.0e-34 151.0 127 63.8
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 4.9e-34 148.7 119 66.4
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 6.5e-34 148.3 92 79.3
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 1.1e-33 147.5 134 62.7
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 1.4e-33 147.1 134 63.4
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 1.9e-33 146.7 92 77.2
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.5e-33 145.2 115 68.7
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 5.5e-33 145.2 120 63.3
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.1e-32 143.3 101 72.3
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 2.1e-32 143.3 116 65.5
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 3.9e-31 139.0 133 56.4
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 1.1e-30 137.5 140 52.1
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.3e-29 134.0 129 58.9
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 4.1e-28 129.0 119 58.8
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 2.0e-27 126.7 93 68.8
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 3.2e-25 119.4 120 60.0
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.7e-23 111.7 92 65.2
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 1.4e-20 104.0 106 52.8
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.4e-20 104.0 57 84.2
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 5.3e-20 102.1 115 49.6
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 6.9e-20 101.7 84 58.3
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 9.0e-20 101.3 92 56.5
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 2.6e-19 99.8 106 50.0
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.8e-13 79.0 76 59.2
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.4e-12 77.4 93 49.5
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 2.0e-11 73.6 119 38.7
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 4.5e-11 72.4 71 57.7
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 7.7e-11 71.6 99 40.4
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 7.9e-08 61.6 81 50.6
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 2.6e-06 56.6 97 33.0
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 9.7e-06 54.7 68 52.9


User provided reference genes

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