Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17527 Striga asiatica HOM05D014194 ORTHO05D014656 2.5e-86 322.0 157 100.0
SGA_v2.0_scaffold234G43644 Striga asiatica HOM05D014194 ORTHO05D014656 6.5e-66 254.2 138 87.7
SGA_v2.0_scaffold60G20820 Striga asiatica HOM05D014194 ORTHO05D014656 3.0e-47 192.2 102 92.2
SGA_v2.0_scaffold30G12521 Striga asiatica HOM05D014194 ORTHO05D014656 3.0e-31 139.0 105 65.7
SGA_v2.0_scaffold113G31792 Striga asiatica HOM05D014194 ORTHO05D014656 3.8e-26 122.1 63 95.2
SGA_v2.0_scaffold111G31470 Striga asiatica HOM05D014194 ORTHO05D014656 7.2e-17 91.3 46 97.8
Oeu064496.1 Olea europaea HOM05D000045 ORTHO05D011270 3.0e-15 85.9 93 45.2
Oeu024598.1 Olea europaea HOM05D000045 ORTHO05D014656 5.2e-15 85.1 98 42.9
Oeu041131.1 Olea europaea HOM05D000045 ORTHO05D011270 6.8e-15 84.7 98 44.9
SGA_v2.0_scaffold8G04271 Striga asiatica HOM05D011878 ORTHO05D011270 1.7e-13 80.1 85 47.1
TWI53G1228 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-12 75.5 100 40.0
TWI56G0811 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-12 75.5 100 40.0
TWI14G1038 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.0e-12 74.7 97 42.3
TWI53G2134 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.0e-12 74.7 100 42.0
TWI79G0465 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.0e-12 74.7 100 42.0
Oeu032610.1 Olea europaea HOM05D000045 ORTHO05D000611 1.6e-11 73.6 102 41.2
Aqoxy7G02429 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.7e-11 72.8 99 43.4
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-11 72.0 132 37.9
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-11 72.0 132 37.9
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-11 72.0 132 37.9
TWI38G1085 Tripterygium wilfordii HOM05D000045 ORTHO05D011270 4.5e-11 72.0 107 35.5
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 2.3e-10 69.7 98 43.9
TWI14G0214 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-10 69.7 100 37.0
Aqoxy4G01738 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.9e-10 69.3 98 40.8
TWI79G1218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.9e-10 69.3 67 46.3
Atru.chr4.2343 Acer truncatum HOM05D000045 ORTHO05D000067 5.0e-10 68.6 98 43.9
TWI38G1028 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 8.6e-10 67.8 97 40.2
Prupe.1G074100 Prunus persica HOM05D014194 ORTHO05D011270 1.5e-09 67.0 79 44.3
Prupe.3G021400 Prunus persica HOM05D000045 ORTHO05D000611 1.9e-09 66.6 99 41.4
Rhsim02G0171700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.9e-09 66.6 106 41.5
MBI07_g18522_MAGBIO Magnolia biondii HOM05D057054 ORTHO05D014656 2.5e-09 66.2 98 41.8
TWI74G0282 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.5e-09 66.2 100 36.0
Rhsim04G0171600 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.3e-09 64.7 111 37.8
TWI60G1709 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.3e-09 64.7 100 36.0
TWI31G1262 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.5e-09 64.3 97 38.1
Rhsim07G0159000 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.6e-08 63.5 102 37.3
Rhsim05G0121500 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.1e-08 63.2 97 40.2
SGA_v2.0_scaffold16G07519 Striga asiatica HOM05D011878 ORTHO05D011270 2.1e-08 63.2 92 40.2
Rhsim08G0146600 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.7e-08 62.0 95 37.9
SGA_v2.0_scaffold177G39432 Striga asiatica HOM05D011878 ORTHO05D011270 4.7e-08 62.0 93 38.7
Atru.chr3.2698 Acer truncatum HOM05D000045 ORTHO05D000067 1.8e-07 60.1 96 34.4
SGA_v2.0_scaffold185G40051 Striga asiatica HOM05D011878 ORTHO05D011270 2.3e-07 59.7 92 38.0
C02p57720 Brassica napus HOM05D000045 ORTHO05D001346 3.0e-07 59.3 90 34.4
BolC2t11844H Brassica oleracea HOM05D000045 ORTHO05D001346 3.0e-07 59.3 90 34.4
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 4.0e-07 58.9 79 40.5
Rhsim09G0080800 Rhododendron simsii HOM05D000045 ORTHO05D011270 4.0e-07 58.9 99 36.4
vmacro19315 Vaccinium macrocarpon HOM05D000045 ORTHO05D014656 5.2e-07 58.5 97 35.1
Cc01_g15990 Coffea canephora HOM05D000045 ORTHO05D000611 6.8e-07 58.2 132 29.5
TPR.G34286 Trifolium pratense HOM05D000045 ORTHO05D000067 6.8e-07 58.2 92 38.0
Medtr7g074790 Medicago truncatula HOM05D000045 ORTHO05D030148 8.9e-07 57.8 84 39.3
Rhsim06G0088300 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.9e-07 57.8 97 36.1
CANSAT35G0619 Cannabis sativa HOM05D000045 ORTHO05D000067 1.2e-06 57.4 158 30.4
Lalb_Chr09g0328211 Lupinus albus HOM05D000045 ORTHO05D000067 1.2e-06 57.4 90 38.9
Rhsim09G0160500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.2e-06 57.4 95 35.8
Rhsim13G0132100 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.5e-06 57.0 97 36.1
CDE06G1597 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 2.0e-06 56.6 94 36.2
Manes.04G043100 Manihot esculenta HOM05D000045 ORTHO05D000611 2.0e-06 56.6 144 29.9
Prupe.1G195700 Prunus persica HOM05D000045 ORTHO05D000611 2.0e-06 56.6 127 30.7
AUR62002424 Chenopodium quinoa HOM05D000045 ORTHO05D001346 2.6e-06 56.2 92 33.7
ClCG07G015710 Citrullus lanatus HOM05D000045 ORTHO05D000611 2.6e-06 56.2 145 27.6
CsaV3_4G003380 Cucumis sativus L. HOM05D000045 ORTHO05D000611 2.6e-06 56.2 145 27.6
FAN09G4686 Fragaria x ananassa HOM05D000045 ORTHO05D011270 2.6e-06 56.2 68 47.1
Rhsim05G0110700 Rhododendron simsii HOM05D000045 ORTHO05D011270 2.6e-06 56.2 64 43.8
Rhsim10G0159200 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-06 56.2 64 43.8
TPR.G916 Trifolium pratense HOM05D000045 ORTHO05D000611 2.6e-06 56.2 103 35.0
Atru.chr4.1192 Acer truncatum HOM05D000045 ORTHO05D000611 3.4e-06 55.8 91 33.0
Ciclev10013881m.g Citrus clementina HOM05D000045 ORTHO05D000067 3.4e-06 55.8 105 36.2
Rhsim11G0078300 Rhododendron simsii HOM05D000045 ORTHO05D011270 3.4e-06 55.8 62 45.2
Ciclev10016736m.g Citrus clementina HOM05D000045 ORTHO05D000611 4.4e-06 55.5 99 36.4
THA.LOC104819036 Tarenaya hassleriana HOM05D000045 ORTHO05D001346 4.4e-06 55.5 124 30.6
FvH4_2g03921 Fragaria vesca HOM05D000045 ORTHO05D000067 5.8e-06 55.1 97 35.1
QL10p049223 Quercus lobata HOM05D000045 ORTHO05D000611 5.8e-06 55.1 97 32.0
QL10p049227 Quercus lobata HOM05D000045 ORTHO05D000611 5.8e-06 55.1 97 32.0
TWI18G0819 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.8e-06 55.1 87 33.3
TAR365G0744 Trochodendron aralioides HOM05D000045 ORTHO05D000611 5.8e-06 55.1 115 33.0
Ciclev10018239m.g Citrus clementina HOM05D000045 ORTHO05D000611 7.5e-06 54.7 83 34.9
Thhalv10003748m.g Eutrema salsugineum HOM05D000045 ORTHO05D001346 7.5e-06 54.7 123 29.3
MD04G1041900 Malus domestica HOM05D000045 ORTHO05D000611 7.5e-06 54.7 88 31.8
QL10p049195 Quercus lobata HOM05D000045 ORTHO05D000611 7.5e-06 54.7 97 32.0
Rhsim08G0139400 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.5e-06 54.7 97 34.0
THA.LOC104824729 Tarenaya hassleriana HOM05D000045 ORTHO05D000067 7.5e-06 54.7 111 28.8
ECA232G2231 Erigeron canadensis HOM05D000006 ORTHO05D000091 9.8e-06 54.3 106 33.0
FvH4_3g26554 Fragaria vesca HOM05D000045 ORTHO05D012261 9.8e-06 54.3 84 33.3
Gohir.D07G167600 Gossypium hirsutum HOM05D000045 ORTHO05D000611 9.8e-06 54.3 74 37.8
Nn1g09625 Nelumbo nucifera HOM05D000045 ORTHO05D000611 9.8e-06 54.3 74 39.2
Rhsim06G0086700 Rhododendron simsii HOM05D000045 ORTHO05D010036 9.8e-06 54.3 112 33.0


User provided reference genes

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