Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 5.5e-60 234.2 124 100.0
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 2.2e-32 142.5 127 70.1
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 3.4e-17 92.0 135 47.4
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 1.8e-15 86.3 136 50.7
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 7.7e-14 80.9 133 48.1
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 2.9e-13 79.0 128 46.1
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 5.0e-13 78.2 135 43.7
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 1.1e-12 77.0 131 48.1
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.9e-12 76.3 135 43.7
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.5e-12 75.9 133 46.6
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 3.2e-12 75.5 131 47.3
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 4.2e-12 75.1 132 47.0
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 7.2e-12 74.3 161 43.5
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 3.6e-11 72.0 136 44.9
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 3.6e-11 72.0 132 43.2
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 6.1e-11 71.2 130 42.3
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 1.4e-10 70.1 130 42.3
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 1.4e-10 70.1 133 44.4
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 1.8e-10 69.7 132 47.0
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.3e-10 69.3 130 42.3
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 4.0e-10 68.6 130 44.6
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.5e-09 66.6 132 41.7
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 2.0e-09 66.2 134 41.8
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 2.0e-09 66.2 126 41.3
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 5.7e-09 64.7 130 40.8
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 7.5e-09 64.3 110 48.2
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 1.3e-08 63.5 118 44.1
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 1.7e-08 63.2 127 42.5
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.7e-08 63.2 128 41.4
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.7e-08 63.2 130 43.8
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 2.8e-08 62.4 132 40.2
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 3.7e-08 62.0 111 45.0
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 3.7e-08 62.0 114 41.2
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 4.9e-08 61.6 68 61.8
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 2.4e-07 59.3 133 45.1
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 2.4e-07 59.3 131 45.0
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 2.4e-07 59.3 132 41.7
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 4.1e-07 58.5 132 38.6
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 5.4e-07 58.2 131 40.5
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 7.0e-07 57.8 127 39.4
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 1.2e-06 57.0 128 40.6
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 3.5e-06 55.5 127 39.4
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 3.5e-06 55.5 64 56.2
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 5.9e-06 54.7 137 38.0


User provided reference genes

Program Settings