Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17515 Striga asiatica HOM05D007299 ORTHO05D009106 4.7e-146 521.2 260 100.0
Migut.L00603 Erythranthe guttata HOM05D007299 ORTHO05D009106 7.4e-75 284.6 263 60.8
Cc11_g02600 Coffea canephora HOM05D007299 ORTHO05D009106 7.4e-59 231.5 315 48.9
ECA246G3185 Erigeron canadensis HOM05D007299 ORTHO05D009106 9.1e-57 224.6 288 49.3
Manes.10G068700 Manihot esculenta HOM05D007299 ORTHO05D009106 1.4e-54 217.2 264 51.1
PGSC0003DMG400031371 Solanum tuberosum HOM05D007299 ORTHO05D009106 1.9e-54 216.9 287 47.0
MSTRG.422 Avicennia marina HOM05D007299 ORTHO05D009106 3.2e-54 216.1 170 64.1
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 4.2e-54 215.7 274 48.5
Dinv13815 Davidia involucrata HOM05D007299 ORTHO05D009106 1.2e-53 214.2 279 48.7
Lj3g0027807 Lotus japonicus HOM05D007299 ORTHO05D009106 2.7e-53 213.0 279 51.6
Nn3g18668 Nelumbo nucifera HOM05D007299 ORTHO05D009106 1.0e-52 211.1 285 48.1
CiPaw.05G165900 Carya illinoinensis HOM05D007299 ORTHO05D009106 1.4e-52 210.7 281 49.1
CANSAT78G0052 Cannabis sativa HOM05D007299 ORTHO05D009106 1.8e-52 210.3 279 47.7
Actinidia13749 Actinidia chinensis HOM05D007299 ORTHO05D009106 2.3e-52 209.9 323 42.1
TWI77G0874 Tripterygium wilfordii HOM05D007299 ORTHO05D009106 3.0e-52 209.5 291 45.4
Ca_19013_v3 Cicer arietinum L. HOM05D007299 ORTHO05D009106 6.7e-52 208.4 269 48.7
Nitab4.5_0000129g0380 Nicotiana tabacum HOM05D007299 ORTHO05D009106 1.5e-51 207.2 272 47.1
Hund24259 Selenicereus undatus HOM05D007299 ORTHO05D009106 2.0e-51 206.8 302 44.0
arahy.Tifrunner.gnm1.ann1.NVJW8G Arachis hypogaea HOM05D007299 ORTHO05D009106 3.3e-51 206.1 280 46.8
Rhsim09G0078300 Rhododendron simsii HOM05D007299 ORTHO05D009106 4.4e-51 205.7 288 47.6
arahy.Tifrunner.gnm1.ann1.IBNY1Y Arachis hypogaea HOM05D007299 ORTHO05D009106 9.7e-51 204.5 281 46.3
TAR622G0038 Trochodendron aralioides HOM05D007299 ORTHO05D009106 1.7e-50 203.8 291 47.4
Cfa015123 Carpinus fangiana HOM05D007299 ORTHO05D009106 2.2e-50 203.4 271 48.3
MELO3C004425.2 Cucumis melo HOM05D007299 ORTHO05D009106 2.8e-50 203.0 278 46.8
PSO384G1235 Papaver somniferum HOM05D007299 ORTHO05D009106 2.8e-50 203.0 306 45.1
Sc21g0004170 Simmondsia chinensis HOM05D007299 ORTHO05D009106 4.8e-50 202.2 282 47.5
A05p44300 Brassica napus HOM05D007299 ORTHO05D009106 1.4e-49 200.7 256 44.9
Thhalv10021242m.g Eutrema salsugineum HOM05D007299 ORTHO05D009106 1.4e-49 200.7 265 44.5
Lsat_1_v5_gn_3_34281 Lactuca sativa HOM05D007299 ORTHO05D009106 1.4e-49 200.7 270 46.3
TPR.G24986 Trifolium pratense HOM05D007299 ORTHO05D009106 2.4e-49 199.9 273 47.6
AL3G12230 Arabidopsis lyrata HOM05D007299 ORTHO05D009106 4.1e-49 199.1 260 47.7
PGR044G1966 Punica granatum HOM05D007299 ORTHO05D009106 4.1e-49 199.1 312 43.6
Aa31LG5G13290 Aethionema arabicum HOM05D007299 ORTHO05D009106 5.3e-49 198.7 276 45.7
MBI03_g22264_MAGBIO Magnolia biondii HOM05D007299 ORTHO05D009106 5.3e-49 198.7 305 44.6
Glyma.11G099800 Glycine max HOM05D007299 ORTHO05D009106 7.0e-49 198.4 281 46.6
AT3G02820 Arabidopsis thaliana HOM05D007299 ORTHO05D009106 1.6e-48 197.2 250 47.2
CAN.G880.11 Capsicum annuum HOM05D007299 ORTHO05D009106 1.6e-48 197.2 280 44.6
Sp3g01850 Schrenkiella parvula HOM05D007299 ORTHO05D009106 1.6e-48 197.2 261 46.7
Sed0015300 Sechium edule HOM05D007299 ORTHO05D009106 1.6e-48 197.2 275 48.0
FAN17G2059 Fragaria x ananassa HOM05D007299 ORTHO05D009106 2.0e-48 196.8 292 42.8
GSVIVG01010231001 Vitis vinifera HOM05D007299 ORTHO05D009106 2.6e-48 196.4 293 44.7
FAN22G0217 Fragaria x ananassa HOM05D007299 ORTHO05D009106 4.5e-48 195.7 288 43.8
Eucgr.J01834 Eucalyptus grandis HOM05D007299 ORTHO05D009106 5.9e-48 195.3 288 44.4
Phvul.011G028100 Phaseolus vulgaris HOM05D007299 ORTHO05D009106 5.9e-48 195.3 290 47.2
FvH4_4g36440 Fragaria vesca HOM05D007299 ORTHO05D009106 1.0e-47 194.5 289 41.9
Glyma.12G025700 Glycine max HOM05D007299 ORTHO05D009106 1.0e-47 194.5 281 47.7
FAN07G2538 Fragaria x ananassa HOM05D007299 ORTHO05D009106 1.7e-47 193.7 292 42.5
THA.LOC104820913 Tarenaya hassleriana HOM05D007299 ORTHO05D009106 2.2e-47 193.4 207 53.1
BraA06t23286Z Brassica rapa HOM05D007299 ORTHO05D009106 3.8e-47 192.6 260 44.2
CARHR076830 Cardamine hirsuta HOM05D007299 ORTHO05D009106 3.8e-47 192.6 266 43.2
Lalb_Chr19g0139441 Lupinus albus HOM05D007299 ORTHO05D009106 3.8e-47 192.6 271 45.8
QL03p042773 Quercus lobata HOM05D007299 ORTHO05D009106 5.0e-47 192.2 183 55.2
vmacro10889 Vaccinium macrocarpon HOM05D007299 ORTHO05D009106 6.5e-47 191.8 305 43.6
FAN12G2175 Fragaria x ananassa HOM05D007299 ORTHO05D009106 8.5e-47 191.4 282 43.3
C09p75940 Brassica napus HOM05D007299 ORTHO05D009106 1.9e-46 190.3 257 45.5
BolC5t35063H Brassica oleracea HOM05D007299 ORTHO05D009106 1.9e-46 190.3 257 45.5
AUR62015163 Chenopodium quinoa HOM05D007299 ORTHO05D009106 4.2e-46 189.1 313 43.1
Psat7g177800 Pisum sativum HOM05D007299 ORTHO05D009106 5.5e-46 188.7 263 46.8
Aqoxy3G04214 Aquilegia oxysepala HOM05D007299 ORTHO05D009106 9.4e-46 188.0 286 42.7
Carub.0003s0192 Capsella rubella HOM05D007299 ORTHO05D009106 1.6e-45 187.2 257 45.9
Cpa.g.sc2.109 Carica papaya HOM05D007299 ORTHO05D009106 2.1e-45 186.8 270 43.7
COL.COLO4_27652 Corchorus olitorius HOM05D002463 ORTHO05D002669 3.6e-45 186.0 304 43.1
VMungo1127G0955 Vigna mungo HOM05D007299 ORTHO05D009106 3.6e-45 186.0 288 44.8
RcHm_v2.0_Chr4g0446201 Rosa chinensis HOM05D007299 ORTHO05D009106 8.0e-45 184.9 287 42.5
DCAR_023506 Daucus carota HOM05D007299 ORTHO05D009106 1.4e-44 184.1 333 39.9
Ciclev10005530m.g Citrus clementina HOM05D007299 ORTHO05D009106 2.3e-44 183.3 300 41.0
Solyc04g008600.4 Solanum lycopersicum HOM05D007299 ORTHO05D009106 2.3e-44 183.3 282 41.5
EL10Ac9g22867 Beta vulgaris HOM05D007299 ORTHO05D009106 3.0e-44 183.0 283 44.2
HanXRQChr08g0209311 Helianthus annuus HOM05D007299 ORTHO05D009106 1.5e-43 180.6 273 43.2
HPP92_025841 Vanilla planifolia HOM05D007299 ORTHO05D009106 2.6e-43 179.9 211 47.4
Peaxi162Scf00329g00814 Petunia axillaris HOM05D007299 ORTHO05D009106 4.4e-43 179.1 274 43.1
Duzib268G1125 Durio zibethinus HOM05D007299 ORTHO05D009106 7.5e-43 178.3 309 39.8
Atru.chr11.1092 Acer truncatum HOM05D007299 ORTHO05D009106 9.7e-43 177.9 220 46.8
Sopen04g003760 Solanum pennellii HOM05D007299 ORTHO05D009106 2.8e-42 176.4 282 40.8
Gohir.D02G135500 Gossypium hirsutum HOM05D007299 ORTHO05D009106 8.2e-42 174.9 300 39.3
PSO339G0795 Papaver somniferum HOM05D007299 ORTHO05D009106 1.1e-41 174.5 299 41.8
Potri.010G097400 Populus trichocarpa HOM05D007299 ORTHO05D009106 2.4e-41 173.3 278 41.4
MD13G1009200 Malus domestica HOM05D007299 ORTHO05D009106 4.1e-41 172.6 294 40.5
MD16G1007200 Malus domestica HOM05D007299 ORTHO05D009106 4.1e-41 172.6 296 42.2
Nitab4.5_0003882g0040 Nicotiana tabacum HOM05D007299 ORTHO05D009106 1.6e-40 170.6 277 43.0
Gorai.005G151500 Gossypium raimondii HOM05D007299 ORTHO05D009106 3.5e-40 169.5 299 38.8
Prupe.1G343500 Prunus persica HOM05D007299 ORTHO05D009106 4.5e-40 169.1 305 39.0
Os02g0762200 Oryza sativa ssp. japonica HOM05D007299 ORTHO05D009106 1.3e-39 167.5 322 37.9
Lj3A853G78 Lonicera japonica HOM05D007299 ORTHO05D009106 3.8e-39 166.0 235 45.5
Thecc.02G310600 Theobroma cacao HOM05D007299 ORTHO05D009106 3.8e-39 166.0 307 37.1
ATR0618G188 Amborella trichopoda HOM05D007299 ORTHO05D009106 9.4e-38 161.4 242 44.2
SEGI_39636 Sequoiadendron giganteum HOM05D007299 ORTHO05D009106 1.2e-37 161.0 274 41.6
Sabra10G0069800 Salix brachista HOM05D007299 ORTHO05D009106 2.3e-36 156.8 307 36.2
Zm00001eb228900 Zea mays HOM05D007299 ORTHO05D009106 2.0e-35 153.7 148 54.1
Pp3c24_950 Physcomitrium patens HOM05D007299 ORTHO05D009106 5.7e-35 152.1 297 38.4
CsaV3_2G003690 Cucumis sativus L. HOM05D007299 ORTHO05D009106 7.5e-35 151.8 284 38.0
AUR62017615 Chenopodium quinoa HOM05D007299 ORTHO05D009106 1.5e-27 127.5 253 37.9
AagrBONN_evm.TU.Sc2ySwM_344.3308 Anthoceros agrestis HOM05D007299 ORTHO05D009106 7.5e-27 125.2 216 37.5
Oeu061722.1 Olea europaea HOM05D007299 ORTHO05D009106 6.3e-26 122.1 117 58.1
Mapoly0024s0064 Marchantia polymorpha HOM05D007299 ORTHO05D009106 1.8e-25 120.6 311 33.1
CDE04G3037 Ceratophyllum demersum HOM05D007299 ORTHO05D009106 2.3e-23 113.6 201 38.3
SMO339G0024 Selaginella moellendorffii HOM05D007299 ORTHO05D009106 5.0e-23 112.5 244 36.9
Ah.01g013250 Amaranthus hybridus HOM05D007299 ORTHO05D009106 3.9e-15 86.3 177 36.2
Gohir.A03G110900 Gossypium hirsutum HOM05D007299 ORTHO05D009106 1.9e-14 84.0 216 31.0
Glyma.14G178300 Glycine max HOM05D007299 ORTHO05D009106 2.2e-10 70.5 110 42.7
MCO03G157 Micromonas commoda HOM05D007299 ORTHO05D009106 1.2e-08 64.7 159 28.3


User provided reference genes

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