Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 0.0e+00 1378.2 694 100.0
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 8.3e-299 1030.0 701 75.3
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 9.8e-284 979.9 707 70.3
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 6.0e-257 891.0 709 65.4
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 3.9e-256 888.3 706 65.0
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.1e-254 882.5 710 64.8
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 6.2e-254 880.9 706 64.9
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 3.9e-248 861.7 710 62.7
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 3.3e-247 858.6 722 61.9
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.8e-245 852.8 711 62.2
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 2.4e-245 852.4 710 62.7
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.4e-245 852.4 705 63.3
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 2.1e-241 839.3 705 62.7
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 6.0e-241 837.8 706 62.6
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 2.3e-240 835.9 706 62.7
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 5.7e-239 831.2 704 63.2
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.6e-238 829.7 697 62.6
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 6.3e-238 827.8 713 61.2
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 3.1e-237 825.5 695 62.2
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 8.5e-235 817.4 718 60.3
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 5.5e-234 814.7 719 60.1
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 3.6e-233 812.0 689 62.7
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 4.6e-233 811.6 711 60.5
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.0e-232 810.4 703 60.7
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 5.7e-231 804.7 699 60.7
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 7.4e-231 804.3 711 59.9
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 1.8e-229 799.7 692 61.0
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 1.8e-229 799.7 727 59.0
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 2.4e-229 799.3 713 58.5
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 3.1e-229 798.9 724 58.6
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 4.1e-229 798.5 717 59.8
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 9.1e-229 797.3 709 58.4
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 1.5e-228 796.6 737 58.1
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 2.0e-228 796.2 708 58.1
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 1.0e-227 793.9 620 66.3
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 1.3e-227 793.5 698 60.2
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 2.2e-227 792.7 711 59.5
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 1.1e-226 790.4 714 59.9
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 2.5e-226 789.3 705 58.4
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 5.5e-226 788.1 608 65.8
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 1.2e-225 786.9 703 59.3
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 1.6e-225 786.6 706 57.8
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 2.1e-225 786.2 719 57.6
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 3.6e-225 785.4 689 59.4
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 1.0e-224 783.9 696 61.2
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 8.8e-224 780.8 715 56.2
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 2.0e-223 779.6 692 58.4
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 4.4e-223 778.5 647 62.6
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 1.3e-222 776.9 698 57.9
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 4.8e-222 775.0 715 57.1
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 4.8e-222 775.0 694 59.9
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 2.4e-221 772.7 739 56.0
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 6.9e-221 771.2 691 58.5
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 2.0e-220 769.6 715 55.8
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 3.4e-220 768.8 712 58.3
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 3.4e-220 768.8 691 57.5
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 4.5e-220 768.5 705 57.2
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 5.0e-219 765.0 716 57.5
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 6.5e-219 764.6 715 56.1
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 2.5e-218 762.7 683 58.4
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.2e-218 762.3 742 55.5
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 3.2e-218 762.3 691 58.8
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.3e-216 756.1 742 55.0
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 5.2e-216 755.0 675 58.8
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 8.8e-216 754.2 750 54.7
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.1e-215 753.8 755 54.7
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 4.4e-215 751.9 668 59.6
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 7.4e-215 751.1 714 56.2
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 2.2e-214 749.6 715 55.2
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 2.2e-214 749.6 706 56.5
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.2e-212 743.8 594 64.3
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.3e-211 740.3 706 56.1
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 1.3e-211 740.3 706 55.9
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 2.2e-211 739.6 692 57.8
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 5.0e-211 738.4 678 57.1
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 1.9e-210 736.5 701 57.8
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 3.2e-210 735.7 707 55.7
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 3.2e-210 735.7 699 57.4
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 4.2e-210 735.3 701 57.6
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 4.2e-210 735.3 701 57.5
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 4.2e-210 735.3 701 57.5
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 5.5e-210 734.9 653 59.3
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 7.2e-210 734.6 704 57.1
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 1.6e-209 733.4 701 57.2
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 3.6e-209 732.3 701 57.1
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 4.7e-209 731.9 652 60.6
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 5.7e-207 724.9 699 56.8
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 9.7e-207 724.2 701 56.8
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 1.3e-206 723.8 701 56.5
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 4.5e-204 715.3 704 56.0
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 1.0e-203 714.1 712 55.3
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 2.5e-202 709.5 641 57.4
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 6.1e-201 704.9 681 55.2
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 7.5e-199 698.0 782 50.9
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 2.8e-198 696.0 698 53.7
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 2.0e-196 689.9 602 59.1
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 1.5e-191 673.7 708 50.8
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 2.0e-191 673.3 732 52.2
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.3e-186 656.0 590 59.7
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 4.3e-186 655.6 718 48.9
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.5e-183 647.1 705 51.6
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 7.3e-178 628.2 636 54.6
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 1.5e-175 620.5 700 49.4
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 5.4e-173 612.1 612 52.9
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.4e-165 587.4 522 59.0
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.3e-155 554.3 405 69.9
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 8.1e-153 545.0 524 58.8
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 5.3e-144 515.8 646 48.6
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 5.8e-135 485.7 498 54.0
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 1.3e-134 484.6 694 46.5
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.1e-125 454.9 418 58.6
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 1.5e-122 444.5 742 36.9
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 3.8e-118 429.9 774 35.9
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 2.6e-103 380.6 697 34.6
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 3.1e-88 330.5 334 52.7
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 5.3e-88 329.7 504 39.3
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 5.0e-86 323.2 330 50.9
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 9.5e-77 292.4 289 56.7
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 4.9e-65 253.4 245 55.5
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 1.6e-63 248.4 275 50.2
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 8.9e-51 206.1 249 45.0
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.2e-42 179.1 472 28.6
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 2.6e-42 177.9 274 43.4
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 3.6e-36 157.5 159 49.7
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 4.4e-34 150.6 127 60.6
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 1.9e-29 135.2 551 25.8
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.9e-29 135.2 152 49.3
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 2.4e-24 118.2 86 70.9
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 1.1e-16 92.8 288 30.2
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 1.6e-15 89.0 63 74.6
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 2.2e-09 68.6 89 44.9
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.1e-08 66.2 85 45.9
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 7.9e-07 60.1 63 57.1


User provided reference genes

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