Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 1.0e-46 189.9 110 100.0
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.1e-31 139.0 106 71.7
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 3.6e-31 138.3 106 69.8
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 5.2e-30 134.4 106 69.8
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 3.7e-28 128.3 106 65.1
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 1.1e-27 126.7 106 67.9
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.4e-27 125.6 106 64.2
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 7.1e-27 124.0 109 64.2
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 9.2e-27 123.6 106 64.2
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.2e-26 123.2 100 68.0
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.6e-26 122.9 106 61.3
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.6e-26 122.9 106 63.2
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 3.5e-26 121.7 106 66.0
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 6.0e-26 120.9 106 61.3
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 7.8e-26 120.6 107 61.7
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 2.3e-25 119.0 106 61.3
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 6.6e-25 117.5 106 58.5
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 6.6e-25 117.5 106 67.0
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 6.6e-25 117.5 106 59.4
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.9e-24 115.9 106 61.3
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.9e-24 115.9 106 58.5
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.9e-24 115.9 107 61.7
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.5e-24 115.5 107 61.7
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.5e-24 115.5 106 58.5
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 2.5e-24 115.5 106 59.4
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.3e-24 115.2 106 58.5
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 3.3e-24 115.2 106 57.5
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 4.3e-24 114.8 106 59.4
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 5.6e-24 114.4 106 59.4
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 5.6e-24 114.4 106 59.4
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 5.6e-24 114.4 109 60.6
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 7.3e-24 114.0 106 57.5
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 7.3e-24 114.0 108 59.3
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 9.5e-24 113.6 106 57.5
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 9.5e-24 113.6 106 57.5
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 9.5e-24 113.6 106 58.5
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 9.5e-24 113.6 106 60.4
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.2e-23 113.2 112 56.2
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 1.6e-23 112.8 111 57.7
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.8e-23 112.1 106 60.4
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 2.8e-23 112.1 112 55.4
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.8e-23 112.1 111 57.7
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 3.6e-23 111.7 105 58.1
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 3.6e-23 111.7 106 55.7
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 3.6e-23 111.7 111 56.8
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 4.7e-23 111.3 106 58.5
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 4.7e-23 111.3 106 56.6
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 4.7e-23 111.3 106 57.5
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.7e-23 111.3 106 59.4
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 6.2e-23 110.9 111 55.0
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 6.2e-23 110.9 108 55.6
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 8.1e-23 110.5 118 54.2
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 8.1e-23 110.5 106 56.6
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 8.1e-23 110.5 106 57.5
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 8.1e-23 110.5 106 56.6
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 8.1e-23 110.5 106 57.5
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 8.1e-23 110.5 106 57.5
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 8.1e-23 110.5 106 54.7
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 1.1e-22 110.2 106 57.5
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.4e-22 109.8 118 54.2
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.8e-22 109.4 114 54.4
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 1.8e-22 109.4 114 54.4
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.8e-22 109.4 106 57.5
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.8e-22 109.4 106 55.7
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.8e-22 109.4 106 54.7
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 2.4e-22 109.0 114 54.4
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 2.4e-22 109.0 114 54.4
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 2.4e-22 109.0 114 54.4
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.4e-22 109.0 106 56.6
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 3.1e-22 108.6 115 53.0
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.1e-22 108.6 116 56.0
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 4.0e-22 108.2 106 55.7
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 6.8e-22 107.5 106 55.7
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 6.8e-22 107.5 106 56.6
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.2e-21 106.7 106 56.6
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.5e-21 106.3 106 54.7
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.5e-21 106.3 106 54.7
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 2.0e-21 105.9 117 52.1
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 2.6e-21 105.5 106 55.7
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 5.8e-21 104.4 107 54.2
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 7.6e-21 104.0 107 54.2
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 9.9e-21 103.6 106 52.8
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 1.3e-20 103.2 112 52.7
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 1.3e-20 103.2 104 63.5
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.3e-20 103.2 106 54.7
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 1.3e-20 103.2 100 56.0
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 1.7e-20 102.8 106 52.8
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.7e-20 102.8 106 54.7
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 2.2e-20 102.4 106 53.8
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 2.9e-20 102.1 106 52.8
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.8e-20 101.7 106 54.7
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.8e-20 101.7 106 54.7
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 3.8e-20 101.7 106 53.8
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 8.4e-20 100.5 114 52.6
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.1e-19 100.1 106 51.9
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 1.1e-19 100.1 112 52.7
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 1.9e-19 99.4 108 52.8
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.9e-19 99.4 106 52.8
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 3.2e-19 98.6 106 52.8
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 3.2e-19 98.6 105 50.5
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 4.1e-19 98.2 100 55.0
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 4.1e-19 98.2 105 52.4
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 7.1e-19 97.4 106 50.9
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 1.2e-18 96.7 97 53.6
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 1.2e-18 96.7 106 50.9
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.5e-18 95.1 105 54.3
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 4.6e-18 94.7 100 53.0
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 6.0e-18 94.4 113 48.7
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 7.8e-18 94.0 94 56.4
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 1.0e-17 93.6 115 48.7
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 1.0e-17 93.6 115 48.7
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.0e-17 93.6 105 52.4
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 1.3e-17 93.2 106 47.2
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 5.1e-17 91.3 105 52.4
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 5.1e-17 91.3 114 48.2
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 5.1e-17 91.3 113 46.0
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 5.1e-17 91.3 111 50.5
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 1.1e-16 90.1 116 49.1
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 1.9e-16 89.4 115 47.0
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 1.6e-15 86.3 106 43.4
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.1e-15 85.9 101 53.5
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 3.6e-15 85.1 106 44.3
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 5.2e-14 81.3 107 48.6
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 6.9e-14 80.9 107 43.9
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 2.2e-12 75.9 66 65.2
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 4.2e-11 71.6 87 49.4
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.4e-11 71.2 56 71.4
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.0e-09 67.0 54 72.2
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 5.6e-08 61.2 66 50.0


User provided reference genes

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