Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17496 Striga asiatica HOM05D007760 ORTHO05D008337 3.5e-144 515.0 268 100.0
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 3.8e-42 176.0 311 42.1
SGA_v2.0_scaffold35G14252 Striga asiatica HOM05D007760 ORTHO05D008337 1.5e-33 147.5 130 64.6
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 9.1e-28 128.3 291 39.9
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 4.5e-27 125.9 299 35.8
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.0e-26 124.8 291 35.7
SGA_v2.0_scaffold390G50602 Striga asiatica HOM05D007760 ORTHO05D008337 5.5e-25 119.0 134 57.5
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 3.7e-21 106.3 307 31.9
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.7e-18 97.4 302 30.8
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 2.9e-18 96.7 318 31.4
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 1.5e-17 94.4 291 32.6
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 7.8e-11 72.0 305 29.2
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.3e-10 71.2 295 29.8
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.1e-09 68.2 265 29.4
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 2.1e-08 63.9 133 41.4
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 4.7e-08 62.8 325 28.3
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 1.8e-07 60.8 260 28.1
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.4e-06 56.2 305 29.8


User provided reference genes

Program Settings