Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 0.0e+00 1087.0 536 100.0
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.2e-244 849.7 538 75.8
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 2.0e-231 805.8 539 73.3
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.9e-218 762.7 539 70.5
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 5.8e-207 724.5 588 62.9
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 7.5e-199 697.6 492 69.3
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 1.6e-188 663.3 541 61.4
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 2.1e-188 662.9 537 61.5
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 6.6e-187 657.9 598 56.7
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 5.6e-186 654.8 537 60.1
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.2e-185 653.7 538 61.2
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 3.6e-185 652.1 536 59.5
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 6.2e-185 651.4 541 59.9
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 1.1e-184 650.6 537 60.0
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 5.8e-183 644.8 540 58.1
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 4.2e-181 638.6 541 57.9
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 1.6e-180 636.7 541 56.9
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 1.3e-179 633.6 542 58.7
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 2.3e-179 632.9 541 57.3
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.9e-178 629.8 545 59.4
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 4.3e-178 628.6 543 55.8
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.4e-176 623.6 538 56.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.8e-176 623.2 541 56.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 2.4e-176 622.9 541 56.9
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 3.1e-176 622.5 485 60.8
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 6.9e-176 621.3 543 56.0
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 1.2e-175 620.5 539 57.0
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.0e-175 619.8 542 56.5
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.5e-175 618.6 538 55.6
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 9.9e-175 617.5 538 55.9
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.7e-174 616.7 568 53.9
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 2.2e-174 616.3 541 57.7
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.1e-173 614.0 541 56.2
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 7.1e-173 611.3 541 57.3
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 7.1e-173 611.3 564 56.2
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.2e-172 610.5 541 56.2
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.2e-172 610.5 542 55.9
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 3.5e-172 609.0 532 58.1
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 4.6e-172 608.6 541 54.9
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 6.0e-172 608.2 541 56.2
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 1.0e-171 607.4 547 55.4
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 3.0e-171 605.9 541 54.7
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.5e-170 603.6 541 54.7
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 2.5e-170 602.8 547 55.4
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 3.3e-170 602.4 532 57.5
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.3e-170 602.4 541 54.9
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 4.3e-170 602.1 536 56.7
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 7.4e-170 601.3 545 56.3
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 1.6e-169 600.1 541 54.0
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 3.6e-169 599.0 543 54.3
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.8e-168 596.7 544 54.0
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 6.9e-168 594.7 542 53.9
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 1.2e-167 594.0 544 55.7
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.5e-167 593.6 545 56.0
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 4.5e-167 592.0 541 56.6
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.4e-165 587.0 539 54.7
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.9e-165 586.6 549 55.2
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.9e-165 586.6 549 55.2
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.2e-164 583.9 545 53.6
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 2.1e-164 583.2 543 53.2
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 2.1e-164 583.2 543 53.8
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.1e-164 583.2 541 53.4
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.7e-164 582.8 543 53.2
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.7e-164 582.8 543 54.1
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 6.0e-164 581.6 538 52.0
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 6.0e-164 581.6 543 54.1
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 7.9e-164 581.3 545 53.2
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 7.9e-164 581.3 543 53.2
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.8e-163 580.1 544 54.6
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 3.9e-163 578.9 574 51.0
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 5.1e-163 578.6 544 53.5
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.1e-162 577.4 538 53.5
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 3.7e-161 572.4 541 52.5
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 6.2e-161 571.6 541 52.3
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 3.1e-160 569.3 547 53.9
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 5.3e-160 568.5 539 50.8
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.5e-159 567.0 541 53.6
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.4e-159 565.8 631 47.4
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 5.1e-155 552.0 526 53.8
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 6.7e-155 551.6 541 51.8
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 8.7e-155 551.2 542 52.0
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.3e-153 547.4 541 51.6
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.7e-153 545.8 541 51.0
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.0e-151 540.0 468 58.5
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.2e-149 532.7 458 54.4
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 8.7e-147 524.6 541 49.7
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 6.9e-144 515.0 543 48.4
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 2.2e-142 510.0 546 49.6
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 6.7e-139 498.4 428 58.2
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.8e-137 493.0 448 55.4
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 3.4e-135 486.1 561 47.2
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 7.7e-135 485.0 541 50.1
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 4.1e-128 462.6 468 48.3
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 3.8e-126 456.1 471 49.0
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 6.1e-124 448.7 551 44.6
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 8.2e-121 438.3 553 45.0
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 8.2e-121 438.3 557 44.5
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 8.0e-116 421.8 495 45.9
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.4e-112 410.2 310 64.2
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 1.6e-100 370.9 404 46.8
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 8.0e-92 342.0 565 36.8
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.5e-85 321.2 570 36.7
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 4.0e-83 313.2 562 36.7
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 8.9e-83 312.0 472 39.2
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.0e-82 310.8 218 67.4
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.3e-77 293.5 568 36.1
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.8e-76 290.4 561 35.8
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 9.2e-72 275.4 258 54.7
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 7.1e-56 222.6 207 53.6
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.1e-45 188.7 182 50.0
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 3.3e-37 160.6 109 64.2
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 5.3e-27 126.7 197 37.6
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.0e-26 124.8 76 75.0
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 1.8e-22 111.7 125 44.8
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 1.7e-20 105.1 64 70.3
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 6.3e-20 103.2 106 41.5
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 6.7e-14 83.2 90 50.0
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.1e-08 65.9 58 53.4
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 4.0e-06 57.4 80 37.5


User provided reference genes

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