Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold477G52184 Striga asiatica HOM05D000003 ORTHO05D000651 1.5e-120 436.0 201 100.0
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-15 85.5 144 31.9
RcHm_v2.0_Chr5g0077831 Rosa chinensis HOM05D005989 ORTHO05D011902 8.7e-15 84.7 133 33.1
RcHm_v2.0_Chr3g0466111 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-14 84.3 130 31.5
Atru.chr3.1667 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-14 84.0 144 31.2
Atru.chr4.578 Acer truncatum HOM05D000003 ORTHO05D000651 1.9e-14 83.6 144 31.2
Atru.chr12.1874 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-14 83.2 144 31.2
RcHm_v2.0_Chr4g0439261 Rosa chinensis HOM05D000003 ORTHO05D000651 6.2e-13 78.6 134 32.1
RcHm_v2.0_Chr2g0167951 Rosa chinensis HOM05D005989 ORTHO05D000022 1.1e-12 77.8 135 28.9
RcHm_v2.0_Chr4g0409421 Rosa chinensis HOM05D005989 ORTHO05D000022 1.8e-12 77.0 130 33.1
FvH4_6g09211 Fragaria vesca HOM05D000003 ORTHO05D000651 9.0e-12 74.7 135 26.7
FvH4_6g30102 Fragaria vesca HOM05D000003 ORTHO05D000004 3.4e-11 72.8 132 27.3
Aqoxy3G01721 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 5.8e-11 72.0 137 29.2
Lalb_Chr02g0160441 Lupinus albus HOM05D000003 ORTHO05D000004 1.3e-10 70.9 109 29.4
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 8.4e-10 68.2 132 26.5
Aqoxy5G02268 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.9e-09 67.0 131 26.7
Aqoxy2G01857 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.1e-08 63.5 138 24.6
RcHm_v2.0_Chr2g0129631 Rosa chinensis HOM05D005989 ORTHO05D000651 2.7e-08 63.2 98 34.7
PSO063G3358 Papaver somniferum HOM05D000003 ORTHO05D000004 6.0e-08 62.0 143 23.8
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 7.9e-08 61.6 137 27.0
Aqoxy1G02312 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.0e-07 61.2 141 24.1
RcHm_v2.0_Chr7g0200601 Rosa chinensis HOM05D000003 ORTHO05D000651 6.7e-07 58.5 137 26.3
MBI15_g26841_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.7e-07 58.2 151 27.2
Psat2g068600 Pisum sativum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 148 27.0
MBI01_g27612_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.5e-06 57.4 149 28.2
FvH4_2g06951 Fragaria vesca HOM05D000003 ORTHO05D000651 1.9e-06 57.0 106 26.4
Atru.chr3.1897 Acer truncatum HOM05D000003 ORTHO05D000651 4.3e-06 55.8 144 25.7
RcHm_v2.0_Chr5g0018801 Rosa chinensis HOM05D000003 ORTHO05D000651 4.3e-06 55.8 128 27.3
Atru.chr9.279 Acer truncatum HOM05D000003 ORTHO05D000022 7.4e-06 55.1 114 28.1
FvH4_5g38601 Fragaria vesca HOM05D000003 ORTHO05D000651 9.6e-06 54.7 107 25.2


User provided reference genes

Program Settings