Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold477G52174 Striga asiatica HOM05D008923 ORTHO05D016904 1.6e-177 625.9 302 100.0
Sopen00g002560 Solanum pennellii HOM05D008923 ORTHO05D011423 1.1e-34 151.4 80 88.8
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 5.6e-34 149.1 80 87.5
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 6.9e-32 142.1 80 85.0
FAN20G1591 Fragaria x ananassa HOM05D008923 ORTHO05D011423 3.4e-31 139.8 80 83.8
HanXRQMTg0579461 Helianthus annuus HOM05D008923 ORTHO05D011423 4.5e-31 139.4 79 84.8
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 9.3e-29 131.7 80 81.2
VMungo0565G0002 Vigna mungo HOM05D008923 ORTHO05D011423 4.6e-28 129.4 91 73.6
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.5e-26 124.4 72 80.6
Actinidia34868 Actinidia chinensis HOM05D041439 ORTHO05D011423 3.3e-26 123.2 249 38.6
SalBow1G0767 Salvia bowleyana HOM05D019046 ORTHO05D016904 2.6e-23 113.6 168 45.8
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.2e-21 106.7 57 84.2
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 9.3e-21 105.1 65 80.0
RhsimMtG0002900 Rhododendron simsii HOM05D008923 ORTHO05D011423 5.1e-19 99.4 52 90.4
Nitab4.5_0008578g0050 Nicotiana tabacum HOM05D008466 ORTHO05D011423 5.7e-18 95.9 62 75.8
Psat0s2778g0120 Pisum sativum HOM05D008923 ORTHO05D011423 8.2e-17 92.0 147 44.9
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 1.1e-16 91.7 59 78.0
Nitab4.5_0000172g2090 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.1e-16 91.7 58 77.6
CAN.G993.35 Capsicum annuum HOM05D000924 ORTHO05D001209 5.3e-16 89.4 46 89.1
FAN20G2185 Fragaria x ananassa HOM05D019046 ORTHO05D016904 2.0e-15 87.4 115 53.9
Hund22926 Selenicereus undatus HOM05D002729 ORTHO05D003163 1.7e-14 84.3 54 77.8
Cpa.g.sc210.1 Carica papaya HOM05D019046 ORTHO05D016904 3.8e-14 83.2 46 95.7
SalBow1G1245 Salvia bowleyana HOM05D019046 ORTHO05D016904 5.0e-14 82.8 48 91.7
Ca_04597_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013768 6.5e-14 82.4 182 39.6
Nn1g10070 Nelumbo nucifera HOM05D019046 ORTHO05D016904 4.6e-12 76.3 40 97.5
CsaV3_UNG208740 Cucumis sativus L. HOM05D019046 ORTHO05D016904 1.0e-11 75.1 43 95.3
FvH4_c1g00520 Fragaria vesca HOM05D008923 ORTHO05D011423 2.5e-10 70.5 40 85.0
ATR0480G001 Amborella trichopoda HOM05D008923 ORTHO05D011423 1.3e-09 68.2 39 79.5
Nitab4.5_0000925g0100 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.6e-09 67.8 43 74.4
SabraMtG0004700 Salix brachista HOM05D000026 ORTHO05D016904 2.8e-09 67.0 40 90.0
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.8e-08 64.3 42 81.0
SalBow1G1510 Salvia bowleyana HOM05D008923 ORTHO05D011423 6.9e-08 62.4 53 62.3
Nitab4.5_0001796g0330 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.5e-07 61.2 35 80.0
MBI08_g16748_MAGBIO Magnolia biondii HOM05D008923 ORTHO05D011423 1.0e-06 58.5 36 80.6
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 2.2e-06 57.4 30 80.0


User provided reference genes

Program Settings