Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold477G52170 Striga asiatica HOM05D009131 ORTHO05D011137 1.1e-142 510.0 255 100.0
CAN.G950.4 Capsicum annuum HOM05D009131 ORTHO05D011137 1.1e-41 174.5 158 53.8
AT2G07695 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 2.0e-40 170.2 179 49.7
ATMG01280 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.4e-40 169.5 179 49.7
CARHR283480 Cardamine hirsuta HOM05D004291 ORTHO05D005620 2.4e-38 163.3 179 48.0
BolSC28t60388H Brassica oleracea HOM05D009131 ORTHO05D011137 1.7e-36 157.1 161 52.2
CARHR287230 Cardamine hirsuta HOM05D009131 ORTHO05D011137 3.6e-34 149.4 155 51.0
Lsat_1_v5_gn_1_2620 Lactuca sativa HOM05D009131 ORTHO05D011137 6.4e-31 138.7 180 46.1
Lsat_1_v5_gn_7_25441 Lactuca sativa HOM05D009131 ORTHO05D011137 6.4e-31 138.7 180 46.1
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 1.1e-30 137.9 180 39.4
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.4e-30 135.6 195 41.5
PGSC0003DMG400034591 Solanum tuberosum HOM05D009131 ORTHO05D011137 5.4e-30 135.6 255 37.6
PGSC0003DMG402008771 Solanum tuberosum HOM05D009131 ORTHO05D011137 5.4e-30 135.6 255 37.6
Lj2P1230T116 Lonicera japonica HOM05D009131 ORTHO05D011137 2.7e-29 133.3 162 43.8
Ah.03g144220 Amaranthus hybridus HOM05D009131 ORTHO05D011137 7.9e-29 131.7 180 38.3
Solyc00g500099.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 1.7e-28 130.6 157 47.8
Solyc00g500272.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 1.7e-28 130.6 157 47.8
Solyc00g500318.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 1.7e-28 130.6 157 47.8
Solyc00g500361.1 Solanum lycopersicum HOM05D001325 ORTHO05D011137 2.3e-28 130.2 156 47.4
LjContig00315g0007090 Lotus japonicus HOM05D009131 ORTHO05D011137 3.0e-28 129.8 215 38.6
LjContig00439g0010199 Lotus japonicus HOM05D009131 ORTHO05D011137 3.0e-28 129.8 215 38.6
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 1.9e-27 127.1 173 38.2
Solyc00g500116.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 2.5e-27 126.7 157 46.5
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 5.6e-27 125.6 161 44.7
MELO3C027715.2 Cucumis melo HOM05D000743 ORTHO05D011137 1.6e-26 124.0 158 42.4
Cc00_g01640 Coffea canephora HOM05D007194 ORTHO05D044666 2.1e-26 123.6 98 65.3
PGR028G0024 Punica granatum HOM05D009131 ORTHO05D011137 1.1e-25 121.3 188 36.7
PGR069G0015 Punica granatum HOM05D009131 ORTHO05D011137 1.1e-25 121.3 188 36.7
PGR069G0016 Punica granatum HOM05D009131 ORTHO05D011137 1.1e-25 121.3 188 36.7
PGR071G0006 Punica granatum HOM05D004537 ORTHO05D005492 1.1e-25 121.3 188 36.7
A04p09520 Brassica napus HOM05D009131 ORTHO05D011137 9.0e-25 118.2 130 50.8
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 4.5e-24 115.9 171 40.4
Lsat_1_v5_gn_5_16481 Lactuca sativa HOM05D009131 ORTHO05D011137 4.5e-24 115.9 147 44.9
HanXRQMTg0579611 Helianthus annuus HOM05D009131 ORTHO05D011137 7.6e-24 115.2 147 44.2
Solyc00g500170.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 5.4e-22 109.0 151 43.0
Dinv06715 Davidia involucrata HOM05D006320 ORTHO05D007069 2.2e-15 87.0 150 32.0
CAN.G1109.13 Capsicum annuum HOM05D009131 ORTHO05D011137 1.9e-14 84.0 174 33.9
CAN.G1167.18 Capsicum annuum HOM05D009131 ORTHO05D011137 7.9e-13 78.6 76 50.0
Eucgr.I01853 Eucalyptus grandis HOM05D009131 ORTHO05D011137 1.0e-12 78.2 66 53.0
Solyc02g085520.4 Solanum lycopersicum HOM05D003478 ORTHO05D004196 1.3e-12 77.8 96 45.8
unitig_87.g27976 Utricularia gibba HOM05D009131 ORTHO05D011137 3.0e-12 76.6 140 33.6
CsaV3_UNG208200 Cucumis sativus L. HOM05D009131 ORTHO05D011137 1.5e-11 74.3 148 31.1
CAN.G1923.1 Capsicum annuum HOM05D009131 ORTHO05D011137 1.1e-09 68.2 70 51.4
Actinidia34814 Actinidia chinensis HOM05D009131 ORTHO05D011137 2.6e-08 63.5 141 31.2
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 2.9e-07 60.1 129 32.6


User provided reference genes

Program Settings