Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold476G52142 Striga asiatica HOM05D004134 ORTHO05D399067 1.2e-58 229.6 108 100.0
SGA_v2.0_scaffold318G48508 Striga asiatica HOM05D001260 ORTHO05D002424 1.0e-09 67.0 30 93.3
SGA_v2.0_scaffold272G46372 Striga asiatica HOM05D004134 ORTHO05D005240 4.7e-07 58.2 30 80.0
SGA_v2.0_scaffold304G47905 Striga asiatica HOM05D004134 ORTHO05D005240 4.7e-07 58.2 30 80.0
MSTRG.5116 Avicennia marina HOM05D004134 ORTHO05D005240 2.3e-06 55.8 30 76.7
Manes.02G223500 Manihot esculenta HOM05D004134 ORTHO05D005240 2.3e-06 55.8 30 76.7
CANSAT54G0881 Cannabis sativa HOM05D004134 ORTHO05D005240 5.2e-06 54.7 29 75.9
Nn1g06242 Nelumbo nucifera HOM05D004134 ORTHO05D005240 5.2e-06 54.7 30 73.3
Actinidia26163 Actinidia chinensis HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
CiPaw.05G006000 Carya illinoinensis HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Ca_00047_v3 Cicer arietinum L. HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Ciclev10000416m.g Citrus clementina HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
COL.COLO4_33567 Corchorus olitorius HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Duzib147G1693 Durio zibethinus HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Eucgr.G00349 Eucalyptus grandis HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Hma1.2p1_0427F.1_g150710 Hydrangea macrophylla HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Lju50A15T20 Lonicera japonica HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 66.7
PGR042G0619 Punica granatum HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
QL02p100166 Quercus lobata HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Rhsim10G0097200 Rhododendron simsii HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Sabra03G0005000 Salix brachista HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
THA.LOC104801417 Tarenaya hassleriana HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
Thecc.01G149600 Theobroma cacao HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
TAR376G0266 Trochodendron aralioides HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
vmacro19872 Vaccinium macrocarpon HOM05D004134 ORTHO05D005240 6.7e-06 54.3 30 73.3
CSS0009525 Camellia sinensis var. sinensis HOM05D004134 ORTHO05D005240 8.8e-06 53.9 30 70.0
Lj6g0001374 Lotus japonicus HOM05D004134 ORTHO05D005240 8.8e-06 53.9 30 73.3
Medtr2g006020 Medicago truncatula HOM05D004134 ORTHO05D005240 8.8e-06 53.9 30 73.3


User provided reference genes

Program Settings