Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 0.0e+00 1755.0 1005 100.0
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 3.4e-253 879.0 442 99.8
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 1.1e-198 698.0 983 52.6
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 5.4e-174 615.9 974 49.3
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 3.7e-130 470.3 1057 40.0
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 2.4e-129 467.6 777 48.1
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 1.9e-126 458.0 919 41.3
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 5.9e-120 436.4 952 40.8
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 6.1e-117 426.4 850 40.8
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 4.4e-115 420.2 946 43.1
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.5e-112 411.8 880 43.1
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 9.4e-110 402.5 836 39.7
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 4.4e-107 393.7 974 39.6
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 1.5e-102 378.6 558 47.3
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 1.7e-98 365.2 820 38.8
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 7.0e-97 359.8 725 39.4
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 9.1e-97 359.4 820 38.5
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 1.1e-94 352.4 887 38.6
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 2.5e-94 351.3 829 36.4
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 4.2e-94 350.5 729 39.0
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 5.5e-94 350.1 729 39.0
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 1.2e-93 349.0 980 37.6
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 2.3e-92 344.7 828 37.2
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 2.0e-91 341.7 848 39.6
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 7.5e-91 339.7 936 35.9
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.4e-89 335.5 810 37.9
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 3.1e-89 334.3 1002 35.1
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 3.1e-89 334.3 694 40.1
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 1.2e-88 332.4 711 39.1
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 7.7e-88 329.7 705 41.7
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 1.6e-85 322.0 793 38.5
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 4.7e-85 320.5 983 35.5
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 6.1e-85 320.1 789 39.4
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 5.2e-84 317.0 877 35.7
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.2e-83 315.8 846 35.6
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 1.5e-83 315.5 702 38.3
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 2.6e-83 314.7 837 38.1
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 2.6e-83 314.7 839 38.7
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 1.3e-82 312.4 664 41.7
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 3.7e-82 310.8 860 37.7
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 7.0e-81 306.6 871 38.2
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 1.6e-80 305.4 682 39.4
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 2.0e-80 305.1 966 37.0
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 4.5e-80 303.9 701 38.4
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 1.7e-79 302.0 980 36.4
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 2.9e-79 301.2 859 35.9
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 7.3e-78 296.6 868 34.9
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 2.8e-77 294.7 900 34.8
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 2.8e-77 294.7 585 41.5
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 6.1e-77 293.5 877 35.1
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 2.3e-76 291.6 958 35.5
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 3.4e-75 287.7 893 34.7
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 9.8e-75 286.2 918 34.0
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.3e-74 285.8 986 33.2
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 4.9e-74 283.9 975 34.8
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 1.4e-73 282.3 406 47.8
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 4.1e-73 280.8 828 37.8
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 5.4e-73 280.4 811 37.4
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 7.0e-73 280.0 701 37.2
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 3.5e-72 277.7 853 37.7
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 3.0e-71 274.6 816 36.9
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 5.0e-71 273.9 785 35.4
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 1.1e-70 272.7 853 34.6
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 1.6e-69 268.9 971 35.3
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 2.1e-69 268.5 911 36.7
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 8.0e-69 266.5 891 36.7
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 2.3e-68 265.0 878 33.8
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 3.1e-68 264.6 870 37.7
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 5.2e-68 263.8 691 35.2
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 6.8e-68 263.5 960 32.9
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 2.4e-65 255.0 977 36.2
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 3.2e-65 254.6 648 37.7
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 4.1e-65 254.2 883 33.4
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 7.8e-64 250.0 666 37.4
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 1.1e-62 246.1 624 40.5
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 1.6e-61 242.3 489 42.1
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 2.8e-61 241.5 713 37.3
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 5.2e-60 237.3 870 34.8
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 6.8e-60 236.9 701 35.2
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 4.4e-59 234.2 719 35.0
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 5.8e-59 233.8 476 41.6
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 1.2e-56 226.1 970 32.5
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 1.1e-46 193.0 657 36.8
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.5e-43 182.6 748 30.6
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 2.6e-43 181.8 703 32.3
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 9.9e-43 179.9 650 31.4
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 9.3e-41 173.3 935 27.5
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 1.5e-38 166.0 754 29.8
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 1.6e-37 162.5 360 39.2
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 2.1e-37 162.2 395 37.2
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 6.2e-37 160.6 594 32.5
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 6.9e-36 157.1 697 33.6
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 1.8e-31 142.5 811 31.1
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 8.7e-31 140.2 583 34.0
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 7.4e-30 137.1 666 32.6
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 5.3e-28 131.0 413 33.2
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 2.0e-27 129.0 657 32.0
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 3.9e-23 114.8 648 31.6
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.5e-22 112.8 192 45.3
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 2.5e-22 112.1 634 31.1
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 2.5e-22 112.1 634 31.1
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 7.4e-22 110.5 649 29.0
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 2.1e-21 109.0 279 39.4
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 3.7e-21 108.2 643 31.4
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 8.2e-21 107.1 381 34.6
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 2.0e-19 102.4 572 28.7
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 1.0e-18 100.1 507 30.2
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 3.8e-18 98.2 293 34.8
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 1.3e-13 83.2 382 30.4
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 5.9e-11 74.3 97 47.4
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 1.1e-09 70.1 145 48.3
TPR.G24664 Trifolium pratense HOM05D002002 ORTHO05D008797 2.5e-09 68.9 74 50.0
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 2.7e-08 65.5 128 47.7


User provided reference genes

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