Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 2.6e-250 868.2 435 100.0
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 1.1e-240 836.3 435 97.2
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 2.5e-136 489.6 452 58.2
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 7.1e-131 471.5 471 55.6
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 2.1e-127 459.9 464 56.5
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 2.5e-120 436.4 466 53.6
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 5.9e-117 425.2 501 49.5
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 7.7e-117 424.9 384 57.3
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 1.7e-116 423.7 438 52.1
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 2.9e-116 422.9 461 51.6
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.5e-116 421.8 448 51.8
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 1.9e-115 420.2 384 56.8
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 5.5e-115 418.7 448 51.3
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 7.2e-115 418.3 448 51.3
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 9.4e-115 417.9 450 50.4
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 1.2e-114 417.5 464 51.7
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 1.6e-114 417.2 437 51.7
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 4.6e-114 415.6 425 53.4
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 4.6e-114 415.6 431 51.7
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 4.6e-114 415.6 437 51.5
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 6.1e-114 415.2 487 48.9
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 1.0e-113 414.5 381 56.7
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 1.4e-113 414.1 427 51.8
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 1.8e-113 413.7 450 50.4
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 2.3e-113 413.3 489 48.3
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 5.1e-113 412.1 487 49.3
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 6.7e-113 411.8 493 48.7
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 1.1e-112 411.0 476 48.7
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 2.0e-112 410.2 466 50.0
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 2.0e-112 410.2 416 53.4
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 2.0e-112 410.2 450 50.2
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 2.5e-112 409.8 453 49.9
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 2.5e-112 409.8 453 49.9
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 3.3e-112 409.5 500 47.6
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 4.3e-112 409.1 474 48.1
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 5.7e-112 408.7 450 49.8
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 2.2e-111 406.8 479 49.1
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 2.8e-111 406.4 481 48.0
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 3.7e-111 406.0 408 54.9
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 3.7e-111 406.0 407 52.1
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.8e-111 405.6 407 52.1
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 4.8e-111 405.6 457 49.2
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 8.2e-111 404.8 471 48.6
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 8.2e-111 404.8 478 48.3
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 8.2e-111 404.8 455 50.1
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 1.1e-110 404.4 453 50.3
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 1.4e-110 404.1 441 50.8
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 1.8e-110 403.7 477 48.8
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 6.9e-110 401.7 474 47.5
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 9.1e-110 401.4 462 49.6
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 1.2e-109 401.0 471 49.9
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 1.5e-109 400.6 472 46.8
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 2.0e-109 400.2 397 52.9
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.0e-109 400.2 462 49.4
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 2.0e-109 400.2 402 52.0
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.6e-109 399.8 459 49.0
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 3.4e-109 399.4 453 48.8
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 5.9e-109 398.7 453 47.9
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 5.9e-109 398.7 435 50.8
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 1.3e-108 397.5 488 46.9
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 2.2e-108 396.7 427 50.1
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 2.9e-108 396.4 428 50.5
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 5.0e-108 395.6 449 49.9
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 5.0e-108 395.6 459 48.1
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 1.1e-107 394.4 447 49.2
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 1.4e-107 394.0 393 51.9
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 3.2e-107 392.9 451 50.3
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 3.2e-107 392.9 476 47.3
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.2e-106 391.0 432 50.9
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 2.1e-106 390.2 430 50.7
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 2.7e-106 389.8 399 52.1
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 2.7e-106 389.8 467 49.7
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.7e-106 389.0 446 49.1
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 6.1e-106 388.7 463 48.4
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 2.8e-103 379.8 446 47.8
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 3.7e-103 379.4 448 48.9
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 3.7e-103 379.4 430 48.8
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 9.1e-102 374.8 469 49.9
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 9.1e-102 374.8 351 54.7
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 2.6e-101 373.2 459 47.3
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 5.9e-101 372.1 483 46.8
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 5.9e-101 372.1 466 48.3
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 1.0e-100 371.3 469 48.0
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 2.9e-100 369.8 469 48.0
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 3.2e-99 366.3 441 49.2
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 5.5e-99 365.5 468 47.2
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 3.6e-98 362.8 472 47.0
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 6.1e-98 362.1 463 48.2
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 1.4e-97 360.9 463 47.7
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 5.2e-97 359.0 459 47.1
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 4.4e-96 355.9 330 54.5
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 5.3e-94 349.0 447 45.4
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 5.3e-94 349.0 459 45.5
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 2.0e-93 347.1 401 49.9
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 2.1e-90 337.0 351 52.7
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 7.5e-88 328.6 396 46.5
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 5.5e-83 312.4 423 42.6
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 3.4e-80 303.1 338 50.0
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 2.8e-79 300.1 401 42.1
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 8.6e-76 288.5 389 42.2
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 6.8e-73 278.9 386 42.7
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 4.4e-72 276.2 418 42.1
Gohir.D11G349500 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.4e-70 270.4 207 59.9
SEGI_07142 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 9.2e-70 268.5 360 41.7
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 4.0e-57 226.5 342 43.0
Actinidia12910 Actinidia chinensis HOM05D006770 ORTHO05D008356 8.3e-55 218.8 236 52.5
Gohir.A06G000350 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.6e-52 209.1 172 58.7
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 3.8e-31 140.2 182 48.9
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 1.2e-29 135.2 256 32.0
Gohir.D02G000400 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.9e-17 92.8 140 48.6
VMungo0720G0800 Vigna mungo HOM05D006770 ORTHO05D008356 6.5e-15 86.3 121 45.5
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 1.9e-14 84.7 185 34.6
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 7.1e-14 82.8 84 48.8
CBR_g51330 Chara braunii HOM05D009772 ORTHO05D000353 7.4e-11 72.8 271 22.9
vmacro02831 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.3e-07 62.0 43 69.8
HPP92_006127 Vanilla planifolia HOM05D002479 ORTHO05D002675 1.4e-06 58.5 132 23.5
arahy.Tifrunner.gnm1.ann1.7VJC80 Arachis hypogaea HOM05D003177 ORTHO05D003481 1.9e-06 58.2 132 27.3
arahy.Tifrunner.gnm1.ann1.P62B18 Arachis hypogaea HOM05D003177 ORTHO05D003481 1.9e-06 58.2 132 27.3
arahy.Tifrunner.gnm1.ann1.Y3PJTZ Arachis hypogaea HOM05D003177 ORTHO05D003481 1.9e-06 58.2 132 27.3
arahy.Tifrunner.gnm1.ann1.W18Y25 Arachis hypogaea HOM05D003177 ORTHO05D003481 2.5e-06 57.8 132 27.3
FAN26G2355 Fragaria x ananassa HOM05D006258 ORTHO05D007961 5.5e-06 56.6 212 21.7
TAR381G0468 Trochodendron aralioides HOM05D006770 ORTHO05D008356 5.5e-06 56.6 80 43.8
FvH4_1g00580 Fragaria vesca HOM05D006258 ORTHO05D007961 9.3e-06 55.8 119 26.1
FAN28G2306 Fragaria x ananassa HOM05D006258 ORTHO05D007961 9.3e-06 55.8 119 26.1


User provided reference genes

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