Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 0.0e+00 1405.2 792 100.0
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 2.6e-216 756.1 798 62.8
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 1.7e-215 753.4 796 64.7
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.0e-151 541.6 804 53.2
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 6.4e-146 522.3 583 63.1
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.7e-143 514.2 743 53.6
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 3.9e-143 513.1 819 50.5
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 8.7e-143 511.9 737 51.2
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.9e-137 494.2 809 48.5
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.8e-135 487.6 723 51.0
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.8e-127 461.1 756 48.9
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.5e-126 458.0 661 51.6
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.9e-126 457.6 795 44.8
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 4.3e-126 456.4 789 45.4
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 7.4e-126 455.7 763 46.0
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.6e-125 454.5 792 45.2
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.4e-124 450.7 720 49.7
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 3.2e-121 440.3 732 46.3
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 8.7e-119 432.2 743 46.2
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 1.3e-117 428.3 696 48.9
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 6.9e-116 422.5 777 45.4
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 9.0e-116 422.2 793 44.6
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 3.4e-115 420.2 900 42.2
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 5.9e-115 419.5 736 46.5
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.9e-114 417.2 795 43.5
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 3.8e-114 416.8 738 45.3
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 3.8e-114 416.8 725 45.9
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 3.8e-114 416.8 762 45.4
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 5.5e-113 412.9 656 49.1
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 9.3e-113 412.1 766 45.0
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.0e-111 408.7 819 44.2
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 8.7e-111 405.6 723 46.7
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 4.3e-110 403.3 631 40.4
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 4.3e-110 403.3 729 45.0
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 5.7e-110 402.9 726 46.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 9.7e-110 402.1 634 39.9
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 6.3e-109 399.4 714 46.1
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.4e-108 398.3 776 45.1
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.4e-108 398.3 721 45.2
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.4e-108 398.3 751 45.0
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.0e-107 394.4 749 45.1
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 1.7e-106 391.3 761 43.9
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.9e-105 387.9 728 44.8
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.2e-104 385.2 652 49.2
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.4e-103 381.7 622 39.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.0e-103 380.6 854 41.5
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 5.1e-103 379.8 715 45.7
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.5e-102 378.3 723 44.8
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 2.0e-102 377.9 780 43.8
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.7e-101 374.8 630 37.9
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 1.7e-101 374.8 725 44.7
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 2.2e-101 374.4 726 43.4
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 6.3e-101 372.9 753 41.3
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.8e-100 371.3 625 38.9
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.5e-99 368.2 673 37.9
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 6.5e-98 362.8 604 38.2
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 8.5e-98 362.5 653 47.3
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 7.2e-97 359.4 656 46.0
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 9.4e-97 359.0 736 43.5
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 1.4e-95 355.1 656 48.3
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.3e-95 354.4 756 40.3
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 3.0e-95 354.0 709 45.4
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 4.1e-92 343.6 643 47.3
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 9.1e-92 342.4 718 42.1
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.0e-91 341.3 784 39.9
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 4.5e-91 340.1 722 41.4
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 4.5e-91 340.1 660 38.5
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 3.8e-90 337.0 779 41.7
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.5e-89 334.3 716 43.9
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 5.5e-89 333.2 793 40.7
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 5.5e-89 333.2 793 40.6
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 1.2e-88 332.0 710 41.1
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 2.7e-88 330.9 564 51.4
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 3.6e-88 330.5 713 43.2
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 3.6e-88 330.5 778 41.0
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 1.2e-86 325.5 709 42.6
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 1.5e-86 325.1 718 41.4
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 7.5e-86 322.8 733 40.8
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 5.3e-84 316.6 808 38.7
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.5e-78 298.5 668 43.3
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 1.4e-71 275.4 642 41.7
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 2.2e-69 268.1 554 46.8
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 4.1e-68 263.8 719 37.6
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 2.7e-67 261.2 481 35.8
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 4.5e-67 260.4 287 54.0
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 6.6e-66 256.5 626 32.6
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.5e-65 255.4 594 44.4
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 5.6e-65 253.4 221 59.3
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 6.0e-59 233.4 230 58.3
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 6.6e-58 229.9 514 33.5
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 4.4e-54 217.2 599 39.6
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 4.1e-52 210.7 786 28.4
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.4e-46 191.0 473 48.4
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 2.9e-37 161.4 460 43.7
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.4e-36 159.1 520 28.5
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.4e-36 157.1 355 37.2
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.2e-35 156.0 188 47.3
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.5e-30 139.0 483 28.6
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 6.0e-27 127.1 419 44.9
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 4.8e-24 117.5 643 25.5
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 1.1e-20 106.3 143 43.4
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 3.3e-17 94.7 79 62.0
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 2.4e-12 78.6 83 50.6
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 4.2e-12 77.8 47 76.6
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 1.6e-11 75.9 72 54.2
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 2.1e-11 75.5 69 50.7
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 2.7e-11 75.1 81 46.9
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 3.9e-10 71.2 118 37.3
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 3.7e-08 64.7 105 45.7
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 5.3e-07 60.8 154 37.0
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 5.3e-07 60.8 225 33.3


User provided reference genes

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