Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold46G17459 Striga asiatica HOM05D000815 ORTHO05D000636 5.6e-69 264.2 142 100.0
MSTRG.15090 Avicennia marina HOM05D000815 ORTHO05D000636 4.9e-12 75.1 96 51.0
unitig_49.g30744 Utricularia gibba HOM05D000815 ORTHO05D000636 8.3e-12 74.3 146 38.4
SGA_v2.0_scaffold9G04822 Striga asiatica HOM05D000815 ORTHO05D000636 1.4e-11 73.6 127 46.5
Migut.M00262 Erythranthe guttata HOM05D000815 ORTHO05D000636 2.7e-10 69.3 93 49.5
Phvul.005G095000 Phaseolus vulgaris HOM05D000815 ORTHO05D000636 1.5e-08 63.5 107 42.1
unitig_46.g18262 Utricularia gibba HOM05D000815 ORTHO05D000636 1.5e-08 63.5 116 41.4
Lj3g0000231 Lotus japonicus HOM05D000815 ORTHO05D000636 4.3e-08 62.0 121 39.7
Lalb_Chr19g0134871 Lupinus albus HOM05D000815 ORTHO05D000636 4.3e-08 62.0 151 37.7
Peaxi162Scf00469g00312 Petunia axillaris HOM05D000815 ORTHO05D000636 4.3e-08 62.0 141 37.6
Glyma.13G290500 Glycine max HOM05D000815 ORTHO05D000636 5.6e-08 61.6 140 39.3
Cfa023594 Carpinus fangiana HOM05D000815 ORTHO05D000636 7.3e-08 61.2 111 42.3
VMungo1080G0495 Vigna mungo HOM05D000815 ORTHO05D000636 7.3e-08 61.2 107 43.0
AT3G58630 Arabidopsis thaliana HOM05D000815 ORTHO05D000636 9.5e-08 60.8 129 41.9
arahy.Tifrunner.gnm1.ann1.EPKF0N Arachis hypogaea HOM05D000815 ORTHO05D000636 9.5e-08 60.8 88 45.5
Lj8A101T44 Lonicera japonica HOM05D000815 ORTHO05D000636 9.5e-08 60.8 129 40.3
MD10G1279600 Malus domestica HOM05D000815 ORTHO05D000636 9.5e-08 60.8 139 36.7
Glyma.12G210900 Glycine max HOM05D000815 ORTHO05D000636 1.6e-07 60.1 143 38.5
Hma1.2p1_0178F.1_g078790 Hydrangea macrophylla HOM05D000815 ORTHO05D000636 1.6e-07 60.1 139 39.6
AL5G40390 Arabidopsis lyrata HOM05D000815 ORTHO05D000636 2.1e-07 59.7 129 41.1
CSS0044216 Camellia sinensis var. sinensis HOM05D000815 ORTHO05D000636 2.1e-07 59.7 131 41.2
Lj3g0003562 Lotus japonicus HOM05D000815 ORTHO05D000636 2.1e-07 59.7 135 38.5
Carub.0005s2540 Capsella rubella HOM05D000815 ORTHO05D000636 2.8e-07 59.3 129 40.3
Dinv15430 Davidia involucrata HOM05D000815 ORTHO05D000636 2.8e-07 59.3 128 40.6
Thhalv10006105m.g Eutrema salsugineum HOM05D000815 ORTHO05D000636 2.8e-07 59.3 130 40.8
Solyc07g055100.4 Solanum lycopersicum HOM05D000815 ORTHO05D000636 2.8e-07 59.3 135 35.6
Aqoxy1G02059 Aquilegia oxysepala HOM05D000815 ORTHO05D000636 3.6e-07 58.9 68 52.9
Cc05_g08380 Coffea canephora HOM05D000815 ORTHO05D000636 3.6e-07 58.9 138 37.0
Nitab4.5_0011277g0020 Nicotiana tabacum HOM05D000815 ORTHO05D000636 3.6e-07 58.9 125 39.2
BcaB02g08252 Brassica carinata HOM05D000815 ORTHO05D000636 4.7e-07 58.5 147 35.4
Haze_13375 Corylus avellana HOM05D000815 ORTHO05D000636 6.1e-07 58.2 112 42.9
CARHR169020 Cardamine hirsuta HOM05D000815 ORTHO05D000636 8.0e-07 57.8 129 40.3
SalBow7G0253 Salvia bowleyana HOM05D000815 ORTHO05D000636 8.0e-07 57.8 163 35.0
Actinidia16795 Actinidia chinensis HOM05D000815 ORTHO05D000636 1.0e-06 57.4 140 38.6
Phvul.006G176000 Phaseolus vulgaris HOM05D000815 ORTHO05D000636 1.0e-06 57.4 138 36.2
VMungo0540G0075 Vigna mungo HOM05D000815 ORTHO05D000636 1.0e-06 57.4 138 36.2
Nitab4.5_0021218g0010 Nicotiana tabacum HOM05D000815 ORTHO05D000636 1.4e-06 57.0 126 37.3
PGSC0003DMG400007806 Solanum tuberosum HOM05D000815 ORTHO05D000636 1.4e-06 57.0 128 38.3
ATR0602G048 Amborella trichopoda HOM05D000815 ORTHO05D000636 1.8e-06 56.6 147 36.7
AUR62042889 Chenopodium quinoa HOM05D000815 ORTHO05D000636 1.8e-06 56.6 103 40.8
Ca_00437_v3 Cicer arietinum L. HOM05D000815 ORTHO05D000636 1.8e-06 56.6 118 39.0
Medtr4g079960 Medicago truncatula HOM05D000815 ORTHO05D000636 1.8e-06 56.6 103 41.7
Solyc12g010890.2 Solanum lycopersicum HOM05D000815 ORTHO05D000636 1.8e-06 56.6 128 37.5
Sopen12g006250 Solanum pennellii HOM05D000815 ORTHO05D000636 1.8e-06 56.6 128 37.5
AUR62012274 Chenopodium quinoa HOM05D000815 ORTHO05D000636 2.3e-06 56.2 82 37.8
MD05G1300700 Malus domestica HOM05D000815 ORTHO05D000636 2.3e-06 56.2 138 37.0
AUR62022916 Chenopodium quinoa HOM05D000815 ORTHO05D000636 3.0e-06 55.8 82 36.6
Lalb_Chr18g0054541 Lupinus albus HOM05D000815 ORTHO05D000636 3.0e-06 55.8 134 37.3
Peaxi162Scf00871g00029 Petunia axillaris HOM05D000815 ORTHO05D000636 3.0e-06 55.8 67 50.7
Sp5g04220 Schrenkiella parvula HOM05D000815 ORTHO05D000636 3.0e-06 55.8 155 35.5
vmacro12377 Vaccinium macrocarpon HOM05D000815 ORTHO05D000636 3.0e-06 55.8 117 36.8
arahy.Tifrunner.gnm1.ann1.LPK4E6 Arachis hypogaea HOM05D000815 ORTHO05D000636 4.0e-06 55.5 105 40.0
BcaB02g07505 Brassica carinata HOM05D000815 ORTHO05D000636 4.0e-06 55.5 135 39.3
Oeu058993.2 Olea europaea HOM05D000815 ORTHO05D000636 4.0e-06 55.5 157 35.7
Peaxi162Scf00384g00416 Petunia axillaris HOM05D000815 ORTHO05D000636 4.0e-06 55.5 125 39.2
TPR.G23931 Trifolium pratense HOM05D000815 ORTHO05D000636 4.0e-06 55.5 104 39.4
Dinv16773 Davidia involucrata HOM05D000815 ORTHO05D000636 5.2e-06 55.1 142 35.9
TAR629G0571 Trochodendron aralioides HOM05D000815 ORTHO05D000636 5.2e-06 55.1 126 38.9
vmacro16066 Vaccinium macrocarpon HOM05D000815 ORTHO05D000636 5.2e-06 55.1 140 36.4
EL10Ac2g04862 Beta vulgaris HOM05D000815 ORTHO05D000636 6.8e-06 54.7 73 43.8
unitig_699.g19363 Utricularia gibba HOM05D000815 ORTHO05D000636 6.8e-06 54.7 98 39.8
Aa31LG10G13210 Aethionema arabicum HOM05D000815 ORTHO05D000636 8.9e-06 54.3 128 38.3
Ah.01g003560 Amaranthus hybridus HOM05D000815 ORTHO05D000636 8.9e-06 54.3 83 43.4
Lj6g0016738 Lotus japonicus HOM05D000815 ORTHO05D000636 8.9e-06 54.3 118 39.0
Lalb_Chr20g0117461 Lupinus albus HOM05D000815 ORTHO05D000636 8.9e-06 54.3 127 38.6


User provided reference genes

Program Settings