Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold46G17449 Striga asiatica HOM05D000272 ORTHO05D000164 4.7e-55 217.6 110 100.0
SGA_v2.0_scaffold4388G54474 Striga asiatica HOM05D000272 ORTHO05D000164 2.6e-29 132.1 72 87.5
SalBow5G1842 Salvia bowleyana HOM05D000272 ORTHO05D000164 5.1e-17 91.3 73 60.3
Gohir.A04G085500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.9e-16 89.4 76 64.5
Gohir.D04G125300 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.9e-16 89.4 76 64.5
Gorai.012G108300 Gossypium raimondii HOM05D000272 ORTHO05D000164 1.9e-16 89.4 76 64.5
Duzib106G0440 Durio zibethinus HOM05D000272 ORTHO05D000164 3.3e-16 88.6 76 61.8
Duzib128G0272 Durio zibethinus HOM05D000272 ORTHO05D000164 7.3e-16 87.4 77 61.0
Thecc.05G029900 Theobroma cacao HOM05D000272 ORTHO05D000164 4.7e-15 84.7 76 60.5
Cpa.g.sc56.56 Carica papaya HOM05D000272 ORTHO05D000164 8.1e-15 84.0 76 61.8
COL.COLO4_14705 Corchorus olitorius HOM05D000272 ORTHO05D000164 1.1e-14 83.6 75 57.3
Atru.chr8.2082 Acer truncatum HOM05D000272 ORTHO05D000164 3.1e-14 82.0 77 57.1
Dinv35546 Davidia involucrata HOM05D000272 ORTHO05D000164 4.0e-14 81.6 76 56.6
Manes.09G097500 Manihot esculenta HOM05D000272 ORTHO05D000164 4.0e-14 81.6 76 59.2
GSVIVG01034073001 Vitis vinifera HOM05D000272 ORTHO05D000164 6.9e-14 80.9 76 53.9
MSTRG.5631 Avicennia marina HOM05D000272 ORTHO05D000164 9.0e-14 80.5 76 57.9
Oeu053781.1 Olea europaea HOM05D000272 ORTHO05D000164 1.5e-13 79.7 76 57.9
CiPaw.10G148900 Carya illinoinensis HOM05D000272 ORTHO05D000164 2.0e-13 79.3 77 54.5
Cfa017307 Carpinus fangiana HOM05D000272 ORTHO05D000164 4.4e-13 78.2 77 55.8
CiPaw.09G200500 Carya illinoinensis HOM05D000272 ORTHO05D000164 4.4e-13 78.2 77 55.8
Eucgr.K03046 Eucalyptus grandis HOM05D000272 ORTHO05D000164 2.2e-12 75.9 77 54.5
Oeu008787.1 Olea europaea HOM05D000272 ORTHO05D000164 2.2e-12 75.9 76 57.9
MSTRG.19056 Avicennia marina HOM05D000272 ORTHO05D000164 4.9e-12 74.7 76 53.9
Actinidia13821 Actinidia chinensis HOM05D000272 ORTHO05D000164 6.4e-12 74.3 80 52.5
Ciclev10011268m.g Citrus clementina HOM05D000272 ORTHO05D000164 8.4e-12 73.9 74 56.8
TWI74G0489 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 8.4e-12 73.9 73 52.1
Lalb_Chr19g0125081 Lupinus albus HOM05D000272 ORTHO05D000164 1.4e-11 73.2 81 53.1
Nn2g13517 Nelumbo nucifera HOM05D000272 ORTHO05D000164 1.9e-11 72.8 76 55.3
Lalb_Chr03g0042661 Lupinus albus HOM05D000272 ORTHO05D000164 3.2e-11 72.0 79 50.6
AL6G11240 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 4.2e-11 71.6 74 52.7
AT5G02030 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 4.2e-11 71.6 74 52.7
Carub.0006s0088 Capsella rubella HOM05D000272 ORTHO05D000164 5.4e-11 71.2 74 54.1
TWI53G1234 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.1e-10 69.3 73 50.7
CSS0028759 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 2.7e-10 68.9 59 55.9
CANSAT35G0926 Cannabis sativa HOM05D000272 ORTHO05D000164 4.6e-10 68.2 85 54.1
Thhalv10012876m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 4.6e-10 68.2 74 50.0
TAR633G2220 Trochodendron aralioides HOM05D000272 ORTHO05D000164 4.6e-10 68.2 76 48.7
Lsat_1_v5_gn_9_33021 Lactuca sativa HOM05D000272 ORTHO05D000164 6.0e-10 67.8 72 47.2
Dinv37124 Davidia involucrata HOM05D000272 ORTHO05D000164 7.8e-10 67.4 76 51.3
Migut.J00269 Erythranthe guttata HOM05D000272 ORTHO05D000164 1.0e-09 67.0 81 51.9
Prupe.6G263900 Prunus persica HOM05D000272 ORTHO05D000164 1.0e-09 67.0 82 47.6
Sc01g0004760 Simmondsia chinensis HOM05D000272 ORTHO05D000164 1.0e-09 67.0 73 50.7
CDE04G0684 Ceratophyllum demersum HOM05D000272 ORTHO05D000164 1.3e-09 66.6 76 51.3
Glyma.01G104200 Glycine max HOM05D000272 ORTHO05D000164 1.3e-09 66.6 72 52.8
TWI77G0160 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 1.7e-09 66.2 73 46.6
BraA10t45383Z Brassica rapa HOM05D000272 ORTHO05D000164 2.3e-09 65.9 74 50.0
THA.LOC104816243 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 2.3e-09 65.9 73 50.7
unitig_27.g24792 Utricularia gibba HOM05D000272 ORTHO05D000164 3.0e-09 65.5 75 53.3
Glyma.03G070900 Glycine max HOM05D000272 ORTHO05D000164 3.9e-09 65.1 73 53.4
CARHR211330 Cardamine hirsuta HOM05D000272 ORTHO05D000164 5.1e-09 64.7 74 48.6
Lj1g0008977 Lotus japonicus HOM05D000272 ORTHO05D000164 5.1e-09 64.7 76 55.3
VMungo0331G1710 Vigna mungo HOM05D000272 ORTHO05D000164 5.1e-09 64.7 75 52.0
BraA02t04708Z Brassica rapa HOM05D000272 ORTHO05D000164 6.6e-09 64.3 76 47.4
A10p33530 Brassica napus HOM05D000272 ORTHO05D000164 8.7e-09 63.9 74 48.6
Lj2A87T48 Lonicera japonica HOM05D000272 ORTHO05D000164 8.7e-09 63.9 75 49.3
BcaNung05704 Brassica carinata HOM05D000272 ORTHO05D000164 1.1e-08 63.5 72 48.6
BolC9t60176H Brassica oleracea HOM05D000272 ORTHO05D000164 1.1e-08 63.5 72 48.6
PGR004G0830 Punica granatum HOM05D000272 ORTHO05D000164 1.1e-08 63.5 80 47.5
A03p00470 Brassica napus HOM05D000272 ORTHO05D000164 1.5e-08 63.2 74 50.0
C02p00350 Brassica napus HOM05D000272 ORTHO05D000164 1.5e-08 63.2 76 47.4
C09p74440 Brassica napus HOM05D000272 ORTHO05D000164 1.5e-08 63.2 74 48.6
BolC2t06035H Brassica oleracea HOM05D000272 ORTHO05D000164 1.5e-08 63.2 76 47.4
BraA03t09439Z Brassica rapa HOM05D000272 ORTHO05D000164 1.5e-08 63.2 74 50.0
BcaNung04458 Brassica carinata HOM05D000272 ORTHO05D000164 1.9e-08 62.8 74 48.6
Nn2g11279 Nelumbo nucifera HOM05D000272 ORTHO05D000164 1.9e-08 62.8 77 49.4
TAR636G1256 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.9e-08 62.8 77 44.2
Phvul.010G011900 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 2.5e-08 62.4 74 48.6
QL07p028471 Quercus lobata HOM05D000272 ORTHO05D000164 2.5e-08 62.4 79 46.8
MBI05_g02660_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 3.3e-08 62.0 73 46.6
Phvul.008G114300 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 3.3e-08 62.0 80 47.5
TAR623G0599 Trochodendron aralioides HOM05D000272 ORTHO05D000164 3.3e-08 62.0 76 46.1
BcaB05g21891 Brassica carinata HOM05D000272 ORTHO05D000164 4.3e-08 61.6 76 44.7
FAN05G4744 Fragaria x ananassa HOM05D000272 ORTHO05D000164 4.3e-08 61.6 79 43.0
BcaB01g06207 Brassica carinata HOM05D000272 ORTHO05D000164 5.6e-08 61.2 73 47.9
vmacro20190 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 5.6e-08 61.2 77 46.8
FvH4_6g12810 Fragaria vesca HOM05D000272 ORTHO05D000164 7.3e-08 60.8 79 44.3
Rhsim05G0197300 Rhododendron simsii HOM05D000272 ORTHO05D000164 7.3e-08 60.8 79 44.3
BcaB01g06077 Brassica carinata HOM05D000272 ORTHO05D000164 1.3e-07 60.1 75 49.3
C03p00750 Brassica napus HOM05D000272 ORTHO05D000164 1.3e-07 60.1 75 49.3
BolC3t12638H Brassica oleracea HOM05D000272 ORTHO05D000164 1.3e-07 60.1 75 49.3
RcHm_v2.0_Chr3g0464821 Rosa chinensis HOM05D000272 ORTHO05D000164 1.3e-07 60.1 80 48.8
FAN09G0863 Fragaria x ananassa HOM05D000272 ORTHO05D000164 2.1e-07 59.3 79 41.8
Aa31LG1G22670 Aethionema arabicum HOM05D000272 ORTHO05D000164 2.8e-07 58.9 74 44.6
Psat3g133160 Pisum sativum HOM05D000272 ORTHO05D000164 2.8e-07 58.9 74 48.6
THA.LOC104827027 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 2.8e-07 58.9 73 49.3
VMungo1383G2879 Vigna mungo HOM05D000272 ORTHO05D000164 2.8e-07 58.9 80 47.5
Ca_27160_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 3.6e-07 58.5 74 48.6
FAN14G4757 Fragaria x ananassa HOM05D000272 ORTHO05D000164 3.6e-07 58.5 79 43.0
Glyma.18G189700 Glycine max HOM05D000272 ORTHO05D000164 3.6e-07 58.5 80 45.0
FAN02G2332 Fragaria x ananassa HOM05D000272 ORTHO05D000164 4.8e-07 58.2 79 41.8
DCAR_012135 Daucus carota HOM05D000272 ORTHO05D000164 6.2e-07 57.8 77 45.5
Aqoxy2G02368 Aquilegia oxysepala HOM05D000272 ORTHO05D000164 8.1e-07 57.4 77 44.2
Ca_20650_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 8.1e-07 57.4 75 48.0
MD12G1153600 Malus domestica HOM05D000272 ORTHO05D000164 8.1e-07 57.4 76 44.7
Gohir.A01G221200 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.8e-06 56.2 77 44.2
Lj3C962T0 Lonicera japonica HOM05D000272 ORTHO05D000164 1.8e-06 56.2 77 48.1
MD04G1138100 Malus domestica HOM05D000272 ORTHO05D000164 3.1e-06 55.5 79 46.8
Nitab4.5_0004744g0010 Nicotiana tabacum HOM05D000272 ORTHO05D000164 4.0e-06 55.1 77 42.9
Sp6g40400 Schrenkiella parvula HOM05D000272 ORTHO05D000164 4.0e-06 55.1 72 41.7
Haze_20875 Corylus avellana HOM05D000272 ORTHO05D000164 6.9e-06 54.3 52 50.0


User provided reference genes

Program Settings