Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 4.0e-128 461.5 238 100.0
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 5.8e-58 228.4 203 60.1
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 4.6e-55 218.8 216 55.6
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 1.2e-52 210.7 203 55.7
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 7.5e-50 201.4 210 54.3
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 4.9e-49 198.7 198 55.6
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 2.7e-47 193.0 147 61.2
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 3.5e-47 192.6 208 54.3
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.0e-46 191.0 203 52.7
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 3.0e-46 189.5 143 62.2
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 3.0e-46 189.5 145 60.7
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 6.6e-46 188.3 203 51.7
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 1.5e-45 187.2 156 59.0
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 2.5e-45 186.4 151 58.3
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 3.3e-45 186.0 203 51.7
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 5.6e-45 185.3 198 52.0
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 5.6e-45 185.3 141 63.1
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 5.6e-45 185.3 167 55.7
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 5.6e-45 185.3 169 55.6
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 5.6e-45 185.3 162 56.2
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 9.5e-45 184.5 198 52.0
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 9.5e-45 184.5 181 54.7
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 9.5e-45 184.5 164 57.9
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 1.2e-44 184.1 167 58.1
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 1.6e-44 183.7 201 50.2
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 1.6e-44 183.7 203 51.2
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 2.8e-44 183.0 192 51.0
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 2.8e-44 183.0 163 55.8
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 3.6e-44 182.6 209 49.8
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 4.7e-44 182.2 137 61.3
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 4.7e-44 182.2 203 51.2
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 6.2e-44 181.8 203 51.2
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 8.1e-44 181.4 154 57.8
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 1.1e-43 181.0 181 53.0
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.4e-43 180.6 182 54.9
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.4e-43 180.6 206 51.5
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 1.4e-43 180.6 160 56.2
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 2.3e-43 179.9 185 52.4
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 4.0e-43 179.1 202 49.5
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 4.0e-43 179.1 203 46.8
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 4.0e-43 179.1 213 48.8
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 5.2e-43 178.7 185 51.4
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 6.8e-43 178.3 146 56.2
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 8.9e-43 177.9 210 51.0
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 8.9e-43 177.9 203 50.2
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 1.2e-42 177.6 151 57.6
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 5.8e-42 175.3 166 54.2
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 9.9e-42 174.5 150 59.3
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 1.3e-41 174.1 231 44.6
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 3.7e-41 172.6 162 54.3
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.4e-40 170.6 201 49.3
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 1.4e-40 170.6 203 47.8
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.4e-40 169.9 233 43.3
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 4.1e-40 169.1 218 45.0
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.6e-39 167.2 145 55.2
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 2.7e-39 166.4 203 47.8
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 2.7e-39 166.4 190 50.5
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 7.8e-39 164.9 200 46.0
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 1.3e-38 164.1 134 58.2
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 8.6e-38 161.4 119 62.2
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.5e-37 160.6 202 48.5
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 4.3e-37 159.1 152 52.0
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 4.3e-37 159.1 169 49.1
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 2.8e-36 156.4 157 48.4
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 3.6e-36 156.0 124 58.1
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 6.2e-36 155.2 209 44.5
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 8.1e-36 154.8 145 53.1
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 8.1e-36 154.8 195 46.7
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 2.4e-35 153.3 167 49.7
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 3.1e-35 152.9 174 48.9
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 5.2e-35 152.1 160 49.4
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 6.8e-35 151.8 200 46.5
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 8.9e-35 151.4 207 44.9
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 1.5e-34 150.6 146 52.1
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 2.0e-34 150.2 168 47.0
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 4.9e-33 145.6 113 62.8
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 6.0e-31 138.7 160 48.8
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 6.0e-31 138.7 140 50.0
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 1.7e-30 137.1 210 41.9
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 3.0e-30 136.3 162 46.9
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 3.0e-30 136.3 209 42.6
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 8.7e-30 134.8 209 41.1
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 1.5e-29 134.0 153 46.4
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 1.5e-29 134.0 153 46.4
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.1e-28 130.2 113 58.4
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 8.1e-28 128.3 83 73.5
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 1.5e-26 124.0 183 40.4
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 7.6e-26 121.7 86 68.6
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 1.9e-24 117.1 151 44.4
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 4.2e-24 115.9 117 48.7
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 6.0e-23 112.1 150 42.7
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 3.9e-22 109.4 86 64.0
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 1.1e-21 107.8 71 69.0
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.6e-20 104.0 124 41.9
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 2.8e-20 103.2 83 60.2
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 6.9e-19 98.6 116 48.3
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 9.0e-19 98.2 97 51.5
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 1.4e-16 90.9 76 57.9
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 2.4e-16 90.1 80 52.5
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 3.2e-16 89.7 110 48.2
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 3.2e-16 89.7 110 48.2
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 2.7e-15 86.7 115 34.8
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 3.5e-15 86.3 68 63.2
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.3e-14 84.3 124 39.5
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 2.3e-14 83.6 66 57.6
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 2.3e-14 83.6 113 36.3
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.3e-14 83.6 53 67.9
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 1.1e-13 81.3 85 45.9
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 1.1e-13 81.3 109 34.9
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 1.5e-13 80.9 52 67.3
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 1.5e-13 80.9 52 67.3
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 4.3e-13 79.3 52 61.5
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 4.8e-12 75.9 142 31.0
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 3.1e-11 73.2 124 30.6
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 1.7e-09 67.4 47 59.6
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 4.2e-08 62.8 56 55.4
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 9.3e-08 61.6 56 53.6
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 1.6e-07 60.8 55 52.7
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 1.8e-06 57.4 53 52.8


User provided reference genes

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