Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold46G17388 Striga asiatica HOM05D000431 ORTHO05D018866 1.9e-59 232.3 114 100.0
Ca_00060_v3 Cicer arietinum L. HOM05D000431 ORTHO05D000364 1.2e-13 80.1 93 51.6
CDE08G0374 Ceratophyllum demersum HOM05D000431 ORTHO05D000364 6.7e-12 74.3 93 49.5
SalBow6G5223 Salvia bowleyana HOM05D000431 ORTHO05D000364 8.7e-12 73.9 52 71.2
SalBow1G4071 Salvia bowleyana HOM05D000431 ORTHO05D000364 2.5e-11 72.4 52 67.3
Nitab4.5_0000948g0220 Nicotiana tabacum HOM05D000431 ORTHO05D000364 9.6e-11 70.5 107 44.9
Ca_17591_v3 Cicer arietinum L. HOM05D000431 ORTHO05D000364 4.8e-10 68.2 116 42.2
Nn1g05433 Nelumbo nucifera HOM05D000431 ORTHO05D000364 2.4e-09 65.9 52 63.5
Nitab4.5_0000905g0170 Nicotiana tabacum HOM05D000431 ORTHO05D000364 2.4e-09 65.9 111 42.3
Nitab4.5_0006481g0010 Nicotiana tabacum HOM05D000431 ORTHO05D000364 2.4e-09 65.9 111 42.3
CAN.G507.8 Capsicum annuum HOM05D000431 ORTHO05D018866 5.3e-09 64.7 64 51.6
Peaxi162Scf00003g03945 Petunia axillaris HOM05D000431 ORTHO05D000364 5.3e-09 64.7 104 43.3
EL10Ac5g12258 Beta vulgaris HOM05D000431 ORTHO05D000364 9.0e-09 63.9 70 54.3
COL.COLO4_11768 Corchorus olitorius HOM05D000431 ORTHO05D000364 9.0e-09 63.9 127 38.6
Nitab4.5_0002698g0110 Nicotiana tabacum HOM05D000431 ORTHO05D000364 9.0e-09 63.9 136 37.5
SGA_v2.0_scaffold338G49217 Striga asiatica HOM05D000431 ORTHO05D000364 9.0e-09 63.9 127 38.6
Nitab4.5_0002462g0030 Nicotiana tabacum HOM05D000431 ORTHO05D000364 2.6e-08 62.4 70 51.4
Ca_22020_v3 Cicer arietinum L. HOM05D000431 ORTHO05D000364 5.8e-08 61.2 70 51.4
EL10Ac4g08978 Beta vulgaris HOM05D000431 ORTHO05D000364 1.3e-07 60.1 125 37.6
MELO3C003290.2 Cucumis melo HOM05D000431 ORTHO05D000364 1.7e-07 59.7 130 36.9
Nitab4.5_0000620g0160 Nicotiana tabacum HOM05D000431 ORTHO05D000364 1.7e-07 59.7 140 35.0
EL10Ac9g21817 Beta vulgaris HOM05D000431 ORTHO05D000364 2.2e-07 59.3 70 50.0
ClCG04G002510 Citrullus lanatus HOM05D000431 ORTHO05D000364 2.9e-07 58.9 140 35.0
Peaxi162Scf00016g01538 Petunia axillaris HOM05D000431 ORTHO05D000364 2.9e-07 58.9 79 45.6
Aa31LG7G13890 Aethionema arabicum HOM05D000431 ORTHO05D000364 4.9e-07 58.2 72 47.2
Sabra03G0054700 Salix brachista HOM05D000431 ORTHO05D000364 8.4e-07 57.4 86 43.0
Lalb_Chr12g0202781 Lupinus albus HOM05D000431 ORTHO05D010836 1.4e-06 56.6 67 50.7
Pp3c6_16600 Physcomitrium patens HOM05D000431 ORTHO05D000364 1.4e-06 56.6 86 43.0
Glyma.05G176100 Glycine max HOM05D000431 ORTHO05D000364 1.9e-06 56.2 72 47.2
Nitab4.5_0001807g0030 Nicotiana tabacum HOM05D000431 ORTHO05D000364 1.9e-06 56.2 151 32.5
PSO017G6407 Papaver somniferum HOM05D000431 ORTHO05D000364 1.9e-06 56.2 68 51.5
PSO170G4886 Papaver somniferum HOM05D000431 ORTHO05D000364 1.9e-06 56.2 68 51.5
Atru.chr4.1150 Acer truncatum HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Atru.chr6.641 Acer truncatum HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Aqoxy5G02660 Aquilegia oxysepala HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
arahy.Tifrunner.gnm1.ann1.3ML67S Arachis hypogaea HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
arahy.Tifrunner.gnm1.ann1.MX3F0M Arachis hypogaea HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
CANSAT11G2260 Cannabis sativa HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Cpa.g.sc118.28 Carica papaya HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Cpa.g.sc138.19 Carica papaya HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
CiPaw.04G178600 Carya illinoinensis HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
ClCG01G018600 Citrullus lanatus HOM05D000431 ORTHO05D000364 2.4e-06 55.8 70 48.6
ClCG04G002630 Citrullus lanatus HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
MELO3C003286.2 Cucumis melo HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
MELO3C008887.2 Cucumis melo HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
CsaV3_4G030050 Cucumis sativus L. HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
CsaV3_4G030260 Cucumis sativus L. HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Glyma.08G188300 Glycine max HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Glyma.12G169800 Glycine max HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Gohir.A10G155200 Gossypium hirsutum HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Gohir.D10G110600 Gossypium hirsutum HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Gorai.001G141200 Gossypium raimondii HOM05D000431 ORTHO05D010836 2.4e-06 55.8 68 50.0
Gorai.011G121900 Gossypium raimondii HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Lalb_Chr07g0184011 Lupinus albus HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Manes.13G090021 Manihot esculenta HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Medtr2g006330 Medicago truncatula HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Oeu000115.1 Olea europaea HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Oeu017625.1 Olea europaea HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Oeu036665.1 Olea europaea HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Oeu050085.1 Olea europaea HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Psat7g040560 Pisum sativum HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Potri.004G138300 Populus trichocarpa HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Potri.T011000 Populus trichocarpa HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Potri.T011001 Populus trichocarpa HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
PGR102G0814 Punica granatum HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
QL02p099462 Quercus lobata HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
SalBow6G1833 Salvia bowleyana HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
SGA_v2.0_scaffold110G31341 Striga asiatica HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
Thecc.01G234800 Theobroma cacao HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
TPR.G12944 Trifolium pratense HOM05D000431 ORTHO05D000364 2.4e-06 55.8 68 50.0
arahy.Tifrunner.gnm1.ann1.663I25 Arachis hypogaea HOM05D000431 ORTHO05D000364 3.2e-06 55.5 66 51.5
arahy.Tifrunner.gnm1.ann1.IF0A72 Arachis hypogaea HOM05D000431 ORTHO05D000364 3.2e-06 55.5 66 51.5
Gohir.D08G133300 Gossypium hirsutum HOM05D000431 ORTHO05D010836 3.2e-06 55.5 66 51.5
Nitab4.5_0003335g0010 Nicotiana tabacum HOM05D000431 ORTHO05D000364 3.2e-06 55.5 70 48.6
Nitab4.5_0008425g0030 Nicotiana tabacum HOM05D000431 ORTHO05D000364 3.2e-06 55.5 78 47.4
Sabra04G0091800 Salix brachista HOM05D000431 ORTHO05D000364 3.2e-06 55.5 66 51.5
Sabra19G0002800 Salix brachista HOM05D000431 ORTHO05D000364 3.2e-06 55.5 66 51.5
Sabra19G0009400 Salix brachista HOM05D000431 ORTHO05D000364 3.2e-06 55.5 66 51.5
Hund13581 Selenicereus undatus HOM05D000431 ORTHO05D000364 3.2e-06 55.5 71 47.9
SGA_v2.0_scaffold211G42134 Striga asiatica HOM05D000431 ORTHO05D000364 3.2e-06 55.5 66 51.5
MELO3C013893.2 Cucumis melo HOM05D000431 ORTHO05D000364 4.2e-06 55.1 86 43.0
Psat5g057480 Pisum sativum HOM05D000431 ORTHO05D000364 4.2e-06 55.1 68 50.0
TPR.G28701 Trifolium pratense HOM05D000431 ORTHO05D000364 4.2e-06 55.1 68 50.0
CSS0008935 Camellia sinensis var. sinensis HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Cfa002246 Carpinus fangiana HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
MELO3C008885.2 Cucumis melo HOM05D000431 ORTHO05D000364 5.5e-06 54.7 70 45.7
ECA234G1159 Erigeron canadensis HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Gohir.A13G036000 Gossypium hirsutum HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Gohir.D05G146400 Gossypium hirsutum HOM05D000431 ORTHO05D010836 5.5e-06 54.7 66 50.0
Gohir.D13G034300 Gossypium hirsutum HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Gorai.001G109600 Gossypium raimondii HOM05D000431 ORTHO05D010836 5.5e-06 54.7 68 48.5
Gorai.013G038800 Gossypium raimondii HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
HanXRQChr10g0298141 Helianthus annuus HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
HanXRQChr11g0338961 Helianthus annuus HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
HanXRQChr14g0451521 Helianthus annuus HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Lsat_1_v5_gn_5_105721 Lactuca sativa HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Lalb_Chr11g0068831 Lupinus albus HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Lalb_Chr23g0272741 Lupinus albus HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Peaxi162Scf00152g01444 Petunia axillaris HOM05D000431 ORTHO05D000364 5.5e-06 54.7 66 50.0
Solyc01g103940.3 Solanum lycopersicum HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Sopen01g046330 Solanum pennellii HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
PGSC0003DMG400023803 Solanum tuberosum HOM05D000431 ORTHO05D000364 5.5e-06 54.7 68 48.5
Gohir.D04G036200 Gossypium hirsutum HOM05D000431 ORTHO05D010836 7.1e-06 54.3 67 49.3
Lsat_1_v5_gn_7_79141 Lactuca sativa HOM05D000431 ORTHO05D000364 7.1e-06 54.3 66 50.0
Lalb_Chr18g0060961 Lupinus albus HOM05D000431 ORTHO05D000364 7.1e-06 54.3 68 48.5
Lalb_Chr20g0123611 Lupinus albus HOM05D000431 ORTHO05D000364 7.1e-06 54.3 68 48.5
Sc09g0004300 Simmondsia chinensis HOM05D000431 ORTHO05D000364 7.1e-06 54.3 68 48.5
GSVIVG01022427001 Vitis vinifera HOM05D000431 ORTHO05D000364 7.1e-06 54.3 68 48.5
Ca_24616_v3 Cicer arietinum L. HOM05D000431 ORTHO05D000364 9.3e-06 53.9 75 45.3
Gohir.D07G044600 Gossypium hirsutum HOM05D000431 ORTHO05D010836 9.3e-06 53.9 68 48.5


User provided reference genes

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