Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold46G17371 Striga asiatica HOM05D006970 ORTHO05D008332 4.5e-88 328.2 199 100.0
Migut.L01891 Erythranthe guttata HOM05D006970 ORTHO05D008332 2.8e-34 149.4 200 45.0
Migut.O00829 Erythranthe guttata HOM05D006970 ORTHO05D008332 7.7e-32 141.4 201 42.3
Oeu015404.1 Olea europaea HOM05D006970 ORTHO05D008332 6.1e-29 131.7 196 42.9
Peaxi162Scf00324g10017 Petunia axillaris HOM05D006970 ORTHO05D008332 2.0e-27 126.7 174 43.1
Cfa013439 Carpinus fangiana HOM05D006970 ORTHO05D008332 1.7e-26 123.6 202 38.6
Peaxi162Scf00324g00005 Petunia axillaris HOM05D006970 ORTHO05D008332 1.7e-26 123.6 184 41.3
Nitab4.5_0001335g0030 Nicotiana tabacum HOM05D006970 ORTHO05D008332 8.3e-26 121.3 183 38.3
Thecc.09G184300 Theobroma cacao HOM05D006970 ORTHO05D008332 2.4e-25 119.8 188 38.3
Duzib168G1017 Durio zibethinus HOM05D006970 ORTHO05D008332 7.0e-25 118.2 187 40.1
Gohir.A13G209000 Gossypium hirsutum HOM05D006970 ORTHO05D008332 1.2e-24 117.5 196 37.8
Atru.chr7.798 Acer truncatum HOM05D006970 ORTHO05D008332 2.0e-24 116.7 190 40.0
Nitab4.5_0000007g0270 Nicotiana tabacum HOM05D006970 ORTHO05D008332 2.0e-24 116.7 183 37.2
PGSC0003DMG400028751 Solanum tuberosum HOM05D006970 ORTHO05D008332 2.7e-24 116.3 175 40.0
Gorai.013G243700 Gossypium raimondii HOM05D006970 ORTHO05D008332 3.5e-24 115.9 196 37.2
Solyc07g008930.1 Solanum lycopersicum HOM05D006970 ORTHO05D008332 3.5e-24 115.9 175 40.6
Gohir.D13G213400 Gossypium hirsutum HOM05D006970 ORTHO05D008332 7.8e-24 114.8 196 37.2
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 2.3e-23 113.2 187 36.4
Cc06_g21770 Coffea canephora HOM05D006970 ORTHO05D008332 3.8e-23 112.5 196 37.8
Ciclev10009598m.g Citrus clementina HOM05D006970 ORTHO05D008332 5.0e-23 112.1 186 38.2
SalBow5G5711 Salvia bowleyana HOM05D006970 ORTHO05D008332 5.0e-23 112.1 173 39.3
PGSC0003DMG400028750 Solanum tuberosum HOM05D006970 ORTHO05D008332 5.0e-23 112.1 177 39.0
Thecc.09G184400 Theobroma cacao HOM05D006970 ORTHO05D008332 6.6e-23 111.7 175 37.7
Haze_22006 Corylus avellana HOM05D006970 ORTHO05D008332 1.1e-22 110.9 202 35.1
TAR383G0018 Trochodendron aralioides HOM05D006970 ORTHO05D008332 2.5e-22 109.8 198 37.4
QL02p047741 Quercus lobata HOM05D006970 ORTHO05D008332 5.6e-22 108.6 174 37.9
CiPaw.07G196100 Carya illinoinensis HOM05D006970 ORTHO05D008332 7.3e-22 108.2 198 38.4
CiPaw.08G033400 Carya illinoinensis HOM05D006970 ORTHO05D008332 7.3e-22 108.2 179 39.7
COL.COLO4_34244 Corchorus olitorius HOM05D006970 ORTHO05D008332 7.3e-22 108.2 198 36.4
Prupe.1G076900 Prunus persica HOM05D006970 ORTHO05D008332 9.5e-22 107.8 201 34.3
Gorai.009G002800 Gossypium raimondii HOM05D006970 ORTHO05D008332 1.6e-21 107.1 199 37.2
TAR626G0909 Trochodendron aralioides HOM05D006970 ORTHO05D008332 1.6e-21 107.1 201 36.8
Cfa013440 Carpinus fangiana HOM05D006970 ORTHO05D008332 2.8e-21 106.3 173 37.6
Glyma.09G058700 Glycine max HOM05D006970 ORTHO05D008332 2.8e-21 106.3 183 36.1
Rhsim01G0118800 Rhododendron simsii HOM05D006970 ORTHO05D008332 2.8e-21 106.3 196 36.2
Ca_02084_v3 Cicer arietinum L. HOM05D006970 ORTHO05D008332 4.7e-21 105.5 184 37.0
Ca_02089_v3 Cicer arietinum L. HOM05D006970 ORTHO05D008332 4.7e-21 105.5 184 37.0
COL.COLO4_34251 Corchorus olitorius HOM05D006970 ORTHO05D008332 4.7e-21 105.5 198 35.4
Haze_22007 Corylus avellana HOM05D006970 ORTHO05D008332 4.7e-21 105.5 185 35.1
Glyma.15G164800 Glycine max HOM05D006970 ORTHO05D008332 8.0e-21 104.8 192 35.4
Gohir.D05G003200 Gossypium hirsutum HOM05D006970 ORTHO05D008332 8.0e-21 104.8 202 35.6
vmacro20825 Vaccinium macrocarpon HOM05D006970 ORTHO05D008332 8.0e-21 104.8 174 38.5
Duzib168G1189 Durio zibethinus HOM05D006970 ORTHO05D008332 1.0e-20 104.4 196 35.2
Ciclev10009783m.g Citrus clementina HOM05D006970 ORTHO05D008332 1.4e-20 104.0 192 36.5
Cfa013441 Carpinus fangiana HOM05D006970 ORTHO05D008332 1.8e-20 103.6 179 35.2
RcHm_v2.0_Chr4g0399841 Rosa chinensis HOM05D006970 ORTHO05D008332 1.8e-20 103.6 203 33.0
MD13G1243500 Malus domestica HOM05D006970 ORTHO05D008332 2.3e-20 103.2 198 38.4
MD16G1250000 Malus domestica HOM05D006970 ORTHO05D008332 2.3e-20 103.2 212 39.2
Cfa013442 Carpinus fangiana HOM05D006970 ORTHO05D008332 4.0e-20 102.4 185 35.7
Phvul.009G237000 Phaseolus vulgaris HOM05D006970 ORTHO05D008332 8.9e-20 101.3 194 34.5
Potri.006G076500 Populus trichocarpa HOM05D006970 ORTHO05D008332 1.2e-19 100.9 200 36.0
Ciclev10010480m.g Citrus clementina HOM05D006970 ORTHO05D008332 1.5e-19 100.5 179 38.0
Lalb_Chr11g0074841 Lupinus albus HOM05D006970 ORTHO05D008332 4.4e-19 99.0 183 33.3
Lalb_Chr12g0199561 Lupinus albus HOM05D006970 ORTHO05D008332 4.4e-19 99.0 186 35.5
Medtr2g037760 Medicago truncatula HOM05D006970 ORTHO05D008332 4.4e-19 99.0 175 36.0
Medtr4g127530 Medicago truncatula HOM05D006970 ORTHO05D008332 4.4e-19 99.0 209 33.0
Nn8g40876 Nelumbo nucifera HOM05D006970 ORTHO05D008332 4.4e-19 99.0 197 36.5
Psat1g144640 Pisum sativum HOM05D006970 ORTHO05D008332 4.4e-19 99.0 185 34.6
Sabra06G0057400 Salix brachista HOM05D006970 ORTHO05D008332 4.4e-19 99.0 198 34.8
FAN22G0526 Fragaria x ananassa HOM05D006970 ORTHO05D008332 5.7e-19 98.6 203 32.0
Lj6g0012098 Lotus japonicus HOM05D006970 ORTHO05D008332 5.7e-19 98.6 205 35.1
VMungo1309G0689 Vigna mungo HOM05D006970 ORTHO05D008332 7.5e-19 98.2 183 33.9
Gohir.A05G002800 Gossypium hirsutum HOM05D006970 ORTHO05D008332 9.8e-19 97.8 174 37.9
DCAR_019800 Daucus carota HOM05D006970 ORTHO05D008332 1.7e-18 97.1 113 47.8
FAN07G0294 Fragaria x ananassa HOM05D006970 ORTHO05D008332 2.2e-18 96.7 203 31.5
Dinv41166 Davidia involucrata HOM05D006970 ORTHO05D008332 2.9e-18 96.3 156 39.7
FAN12G3539 Fragaria x ananassa HOM05D006970 ORTHO05D008332 2.9e-18 96.3 203 31.5
FAN17G1729 Fragaria x ananassa HOM05D006970 ORTHO05D008332 2.9e-18 96.3 207 31.9
arahy.Tifrunner.gnm1.ann1.7NZ92R Arachis hypogaea HOM05D006970 ORTHO05D008332 4.9e-18 95.5 192 34.9
Haze_22008 Corylus avellana HOM05D006970 ORTHO05D008332 4.9e-18 95.5 168 33.3
FvH4_4g07400 Fragaria vesca HOM05D006970 ORTHO05D008332 4.9e-18 95.5 203 31.5
Manes.06G020600 Manihot esculenta HOM05D006970 ORTHO05D008332 6.4e-18 95.1 185 32.4
Lalb_Chr08g0231751 Lupinus albus HOM05D006970 ORTHO05D008332 8.3e-18 94.7 193 33.2
Lalb_Chr08g0231861 Lupinus albus HOM05D006970 ORTHO05D008332 8.3e-18 94.7 193 33.2
Glyma.17G060200 Glycine max HOM05D006970 ORTHO05D008332 1.8e-17 93.6 197 33.5
Eucgr.C00123 Eucalyptus grandis HOM05D006970 ORTHO05D008332 2.4e-17 93.2 201 30.3
Phvul.003G142300 Phaseolus vulgaris HOM05D006970 ORTHO05D008332 2.4e-17 93.2 197 33.5
TAR625G0812 Trochodendron aralioides HOM05D006970 ORTHO05D008332 3.2e-17 92.8 175 33.7
Sabra18G0117100 Salix brachista HOM05D006970 ORTHO05D008332 7.0e-17 91.7 198 32.8
Glyma.13G099800 Glycine max HOM05D006970 ORTHO05D008332 9.2e-17 91.3 197 34.0
TPR.G5397 Trifolium pratense HOM05D006970 ORTHO05D008332 9.2e-17 91.3 197 32.0
Sed0023812 Sechium edule HOM05D006970 ORTHO05D008332 4.6e-16 89.0 200 31.5
Potri.018G143700 Populus trichocarpa HOM05D006970 ORTHO05D008332 5.9e-16 88.6 198 33.3
PGR142G3285 Punica granatum HOM05D006970 ORTHO05D008332 5.9e-16 88.6 187 32.1
CsaV3_2G008660 Cucumis sativus L. HOM05D006970 ORTHO05D008332 8.6e-15 84.7 177 35.0
Eucgr.C02224 Eucalyptus grandis HOM05D006970 ORTHO05D008332 1.1e-14 84.3 205 34.6
Lj4g0006636 Lotus japonicus HOM05D006970 ORTHO05D008332 1.1e-14 84.3 197 33.0
Ciclev10009750m.g Citrus clementina HOM05D006970 ORTHO05D008332 2.5e-14 83.2 176 33.5
Ciclev10027216m.g Citrus clementina HOM05D006970 ORTHO05D008332 2.5e-14 83.2 149 36.9
ClCG11G011830 Citrullus lanatus HOM05D006970 ORTHO05D008332 4.3e-14 82.4 179 33.0
CDE04G3128 Ceratophyllum demersum HOM05D006970 ORTHO05D008332 5.6e-14 82.0 174 31.6
ATR0626G126 Amborella trichopoda HOM05D006970 ORTHO05D008332 7.3e-14 81.6 195 31.8
Lsat_1_v5_gn_8_69441 Lactuca sativa HOM05D006970 ORTHO05D008332 7.3e-14 81.6 126 38.9
DCAR_019820 Daucus carota HOM05D000178 ORTHO05D001582 9.5e-14 81.3 200 32.5
MELO3C003983.2 Cucumis melo HOM05D006970 ORTHO05D008332 3.6e-13 79.3 179 31.8
Sed0005019 Sechium edule HOM05D006970 ORTHO05D008332 6.2e-13 78.6 168 31.0
CDE02G0129 Ceratophyllum demersum HOM05D006970 ORTHO05D008332 2.3e-12 76.6 191 29.3
MBI13_g31534_MAGBIO Magnolia biondii HOM05D006970 ORTHO05D008332 3.1e-12 76.3 185 33.0
HPP92_017386 Vanilla planifolia HOM05D006970 ORTHO05D008332 4.0e-12 75.9 173 28.3
Os06g0700300 Oryza sativa ssp. japonica HOM05D006970 ORTHO05D008332 5.2e-12 75.5 95 43.2
HPP92_017039 Vanilla planifolia HOM05D006970 ORTHO05D008332 6.8e-12 75.1 171 28.7
HPP92_017115 Vanilla planifolia HOM05D006970 ORTHO05D008332 6.4e-10 68.6 176 27.8
TPR.G30780 Trifolium pratense HOM05D006970 ORTHO05D008332 8.3e-10 68.2 129 33.3
ECA236G3316 Erigeron canadensis HOM05D006970 ORTHO05D008332 1.1e-09 67.8 127 37.0
Aqoxy7G02762 Aquilegia oxysepala HOM05D006970 ORTHO05D008332 1.9e-09 67.0 104 36.5
Sopen07g004850 Solanum pennellii HOM05D006970 ORTHO05D008332 7.0e-09 65.1 124 36.3
ECA240G2451 Erigeron canadensis HOM05D006970 ORTHO05D008332 1.6e-08 63.9 86 39.5
Zm00001eb226840 Zea mays HOM05D006970 ORTHO05D008332 5.0e-07 58.9 103 37.9
HanXRQChr05g0140891 Helianthus annuus HOM05D006970 ORTHO05D008332 1.5e-06 57.4 115 31.3
HPP92_021988 Vanilla planifolia HOM05D006970 ORTHO05D008332 1.5e-06 57.4 92 38.0
Nitab4.5_0000366g0130 Nicotiana tabacum HOM05D006970 ORTHO05D008332 5.6e-06 55.5 145 28.3


User provided reference genes

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