Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold46G17356 Striga asiatica HOM05D001050 ORTHO05D008289 8.9e-99 363.6 185 100.0
Migut.K00292 Erythranthe guttata HOM05D001050 ORTHO05D008289 1.7e-81 306.2 185 84.9
SalBow1G8460 Salvia bowleyana HOM05D001050 ORTHO05D008289 3.2e-80 302.0 180 83.9
Prupe.1G100700 Prunus persica HOM05D001050 ORTHO05D008289 1.2e-63 246.9 184 66.8
Cc06_g14300 Coffea canephora HOM05D001050 ORTHO05D008289 1.6e-63 246.5 184 67.4
Carub.0007s1007 Capsella rubella HOM05D001050 ORTHO05D008289 4.6e-63 245.0 181 68.5
Lj9A725G33 Lonicera japonica HOM05D001050 ORTHO05D008289 1.0e-62 243.8 175 68.6
Cpa.g.sc199.6 Carica papaya HOM05D001050 ORTHO05D008289 3.0e-62 242.3 177 66.7
Sabra18G0087100 Salix brachista HOM05D001050 ORTHO05D008289 3.0e-62 242.3 179 65.4
GSVIVG01023711001 Vitis vinifera HOM05D001050 ORTHO05D008289 5.1e-62 241.5 179 68.2
BcaNung00562 Brassica carinata HOM05D001050 ORTHO05D008289 6.7e-62 241.1 180 67.2
CiPaw.15G162900 Carya illinoinensis HOM05D001050 ORTHO05D008289 8.7e-62 240.7 181 64.1
Thhalv10025790m.g Eutrema salsugineum HOM05D001050 ORTHO05D008289 8.7e-62 240.7 177 68.9
BraA03t15049Z Brassica rapa HOM05D001050 ORTHO05D008289 1.1e-61 240.4 180 66.7
CARHR238400 Cardamine hirsuta HOM05D001050 ORTHO05D008289 1.1e-61 240.4 181 67.4
AL7G21630 Arabidopsis lyrata HOM05D001050 ORTHO05D008289 1.5e-61 240.0 177 68.4
A03p59920 Brassica napus HOM05D001050 ORTHO05D008289 1.5e-61 240.0 180 66.1
C07p57980 Brassica napus HOM05D001050 ORTHO05D008289 1.5e-61 240.0 180 66.7
BolC7t46256H Brassica oleracea HOM05D001050 ORTHO05D008289 2.5e-61 239.2 180 65.6
vmacro01001 Vaccinium macrocarpon HOM05D001050 ORTHO05D008289 2.5e-61 239.2 182 66.5
Aa31LG2G20000 Aethionema arabicum HOM05D001050 ORTHO05D008289 4.3e-61 238.4 178 65.2
AT4G30510 Arabidopsis thaliana HOM05D001050 ORTHO05D008289 4.3e-61 238.4 177 68.4
Cfa020764 Carpinus fangiana HOM05D001050 ORTHO05D008289 5.6e-61 238.0 182 63.7
Sp7g28400 Schrenkiella parvula HOM05D001050 ORTHO05D008289 5.6e-61 238.0 175 68.6
ECA240G3751 Erigeron canadensis HOM05D001050 ORTHO05D008289 2.1e-60 236.1 184 63.6
Potri.018G101200 Populus trichocarpa HOM05D001050 ORTHO05D008289 2.1e-60 236.1 179 63.7
TWI34G0722 Tripterygium wilfordii HOM05D001050 ORTHO05D008289 2.1e-60 236.1 184 64.7
DCAR_031935 Daucus carota HOM05D001050 ORTHO05D008289 2.8e-60 235.7 176 67.6
Duzib187G1651 Durio zibethinus HOM05D001050 ORTHO05D008289 2.8e-60 235.7 176 66.5
CANSAT11G2532 Cannabis sativa HOM05D001050 ORTHO05D008289 3.7e-60 235.3 184 63.0
ClCG11G012710 Citrullus lanatus HOM05D001050 ORTHO05D008289 3.7e-60 235.3 179 65.9
HanXRQChr09g0244701 Helianthus annuus HOM05D001050 ORTHO05D008289 4.8e-60 235.0 180 63.9
Rhsim03G0260300 Rhododendron simsii HOM05D001050 ORTHO05D008289 4.8e-60 235.0 180 66.1
Atru.chr7.414 Acer truncatum HOM05D001050 ORTHO05D008289 6.2e-60 234.6 179 64.2
Rhsim03G0260200 Rhododendron simsii HOM05D001050 ORTHO05D008289 8.1e-60 234.2 182 65.4
TAR625G0323 Trochodendron aralioides HOM05D001050 ORTHO05D008289 1.1e-59 233.8 184 62.5
CSS0005880 Camellia sinensis var. sinensis HOM05D001050 ORTHO05D008289 1.8e-59 233.0 185 64.3
CSS0018567 Camellia sinensis var. sinensis HOM05D001050 ORTHO05D008289 1.8e-59 233.0 185 64.9
Thecc.09G155900 Theobroma cacao HOM05D001050 ORTHO05D008289 2.4e-59 232.6 184 65.2
CsaV3_2G007770 Cucumis sativus L. HOM05D001050 ORTHO05D008289 3.1e-59 232.3 179 64.8
MD16G1259300 Malus domestica HOM05D001050 ORTHO05D008289 3.1e-59 232.3 184 63.6
FAN12G1960 Fragaria x ananassa HOM05D001050 ORTHO05D008289 4.0e-59 231.9 184 63.6
FvH4_4g08740 Fragaria vesca HOM05D001050 ORTHO05D008289 5.3e-59 231.5 178 65.2
Gohir.D04G087400 Gossypium hirsutum HOM05D001050 ORTHO05D008289 6.9e-59 231.1 179 63.7
RcHm_v2.0_Chr4g0405281 Rosa chinensis HOM05D001050 ORTHO05D008289 6.9e-59 231.1 184 63.6
Sed0007478 Sechium edule HOM05D001050 ORTHO05D008289 6.9e-59 231.1 180 64.4
THA.LOC104803529 Tarenaya hassleriana HOM05D001050 ORTHO05D008289 1.2e-58 230.3 176 63.6
FAN17G0516 Fragaria x ananassa HOM05D001050 ORTHO05D008289 2.0e-58 229.6 184 63.0
Hund26419 Selenicereus undatus HOM05D001050 ORTHO05D008289 3.4e-58 228.8 178 63.5
QL02p094584 Quercus lobata HOM05D001050 ORTHO05D008289 5.8e-58 228.0 185 61.6
Glyma.02G207500 Glycine max HOM05D001050 ORTHO05D008289 2.9e-57 225.7 176 64.2
Lj4g0004322 Lotus japonicus HOM05D001050 ORTHO05D008289 2.9e-57 225.7 184 62.5
COL.COLO4_36563 Corchorus olitorius HOM05D001050 ORTHO05D008289 6.5e-57 224.6 179 64.8
Eucgr.C00230 Eucalyptus grandis HOM05D001050 ORTHO05D008289 6.5e-57 224.6 168 67.3
Gorai.012G097500 Gossypium raimondii HOM05D001050 ORTHO05D008289 6.5e-57 224.6 185 61.6
Medtr4g130190 Medicago truncatula HOM05D001050 ORTHO05D008289 6.5e-57 224.6 176 63.6
Lsat_1_v5_gn_7_50861 Lactuca sativa HOM05D001050 ORTHO05D008289 4.2e-56 221.9 186 58.6
Aqoxy5G01192 Aquilegia oxysepala HOM05D001050 ORTHO05D008289 5.5e-56 221.5 179 60.9
Lalb_Chr13g0300631 Lupinus albus HOM05D001050 ORTHO05D008289 5.5e-56 221.5 176 63.1
Phvul.003G152800 Phaseolus vulgaris HOM05D001050 ORTHO05D008289 5.5e-56 221.5 174 63.8
unitig_0.g2692 Utricularia gibba HOM05D001050 ORTHO05D008289 5.5e-56 221.5 168 67.9
VMungo1215G0246 Vigna mungo HOM05D001050 ORTHO05D008289 7.1e-56 221.1 176 63.6
Peaxi162Scf00038g00328 Petunia axillaris HOM05D001050 ORTHO05D008289 1.2e-55 220.3 177 63.3
TPR.G24846 Trifolium pratense HOM05D001050 ORTHO05D008289 3.5e-55 218.8 176 62.5
EL10Ac8g18887 Beta vulgaris HOM05D001050 ORTHO05D008289 7.9e-55 217.6 179 58.7
arahy.Tifrunner.gnm1.ann1.HL628G Arachis hypogaea HOM05D001050 ORTHO05D008289 1.0e-54 217.2 176 63.6
arahy.Tifrunner.gnm1.ann1.J6ADBZ Arachis hypogaea HOM05D001050 ORTHO05D008289 1.0e-54 217.2 176 63.6
Duzib168G0517 Durio zibethinus HOM05D001050 ORTHO05D008289 1.8e-54 216.5 180 63.9
Psat0s2826g0080 Pisum sativum HOM05D001050 ORTHO05D008289 8.7e-54 214.2 176 61.9
MELO3C031521.2 Cucumis melo HOM05D001050 ORTHO05D008289 5.7e-53 211.5 188 58.5
PGSC0003DMG400011161 Solanum tuberosum HOM05D001050 ORTHO05D008289 7.4e-53 211.1 178 60.1
Ciclev10008722m.g Citrus clementina HOM05D001050 ORTHO05D008289 9.6e-53 210.7 177 62.1
Nn2g12504 Nelumbo nucifera HOM05D001050 ORTHO05D008289 2.8e-52 209.1 181 59.1
MBI15_g26078_MAGBIO Magnolia biondii HOM05D001050 ORTHO05D008289 4.8e-52 208.4 175 59.4
Ah.09g228640 Amaranthus hybridus HOM05D001050 ORTHO05D008289 6.3e-52 208.0 179 56.4
Solyc07g006120.3 Solanum lycopersicum HOM05D001050 ORTHO05D008289 1.4e-51 206.8 178 59.0
Sopen07g002230 Solanum pennellii HOM05D001050 ORTHO05D008289 1.4e-51 206.8 178 59.0
CAN.G1190.10 Capsicum annuum HOM05D001050 ORTHO05D008289 1.8e-51 206.5 178 59.6
PSO063G3509 Papaver somniferum HOM05D001050 ORTHO05D008289 1.8e-51 206.5 181 55.8
PSO782G2474 Papaver somniferum HOM05D001050 ORTHO05D008289 4.1e-51 205.3 181 55.2
FAN22G1319 Fragaria x ananassa HOM05D001050 ORTHO05D008289 2.6e-50 202.6 179 60.3
Ca_21159_v3 Cicer arietinum L. HOM05D001050 ORTHO05D008289 4.5e-50 201.8 179 60.3
Glyma.17G070200 Glycine max HOM05D001050 ORTHO05D008289 7.6e-50 201.1 178 59.6
Nitab4.5_0002545g0120 Nicotiana tabacum HOM05D001050 ORTHO05D008289 7.2e-48 194.5 179 59.2
Nitab4.5_0001036g0050 Nicotiana tabacum HOM05D001050 ORTHO05D008289 1.6e-47 193.4 181 59.1
Manes.06G032800 Manihot esculenta HOM05D001050 ORTHO05D008289 3.6e-47 192.2 140 69.3
DCAR_024733 Daucus carota HOM05D001050 ORTHO05D008289 3.0e-46 189.1 133 71.4
ATR0580G127 Amborella trichopoda HOM05D001050 ORTHO05D008289 5.1e-46 188.3 176 52.8
Zm00001eb257610 Zea mays HOM05D001050 ORTHO05D008289 1.1e-43 180.6 177 50.3
Os02g0791800 Oryza sativa ssp. japonica HOM05D001050 ORTHO05D008289 1.4e-43 180.3 175 52.0
HPP92_015866 Vanilla planifolia HOM05D001050 ORTHO05D008289 1.0e-41 174.1 178 48.3
AUR62028390 Chenopodium quinoa HOM05D001050 ORTHO05D008289 1.9e-40 169.9 182 50.0
SEGI_41321 Sequoiadendron giganteum HOM05D001050 ORTHO05D008289 5.5e-40 168.3 187 44.9
Gohir.A05G345900 Gossypium hirsutum HOM05D001050 ORTHO05D008289 2.7e-39 166.0 116 71.6
AUR62039769 Chenopodium quinoa HOM05D001050 ORTHO05D008289 7.9e-39 164.5 182 49.5
PGR142G3225 Punica granatum HOM05D001050 ORTHO05D008289 1.1e-37 160.6 176 51.1
Nn2g12509 Nelumbo nucifera HOM05D001050 ORTHO05D008289 8.2e-36 154.5 141 54.6
Dinv41326 Davidia involucrata HOM05D001050 ORTHO05D008289 1.7e-28 130.2 81 80.2
Hma1.2p1_0325F.1_g125990 Hydrangea macrophylla HOM05D001050 ORTHO05D008289 6.3e-28 128.3 106 58.5
Pp3c7_8510 Physcomitrium patens HOM05D001050 ORTHO05D008289 2.2e-25 119.8 195 36.4
SMO169G0112 Selaginella moellendorffii HOM05D001050 ORTHO05D008289 3.8e-25 119.0 180 38.3
Mapoly0027s0044 Marchantia polymorpha HOM05D001050 ORTHO05D008289 1.9e-24 116.7 181 38.7
Sc14g0001020 Simmondsia chinensis HOM05D001050 ORTHO05D008289 1.6e-23 113.6 79 69.6
SMO202G0081 Selaginella moellendorffii HOM05D001050 ORTHO05D008289 2.2e-20 103.2 178 33.7
MSTRG.26252 Avicennia marina HOM05D001050 ORTHO05D008289 3.8e-17 92.4 64 71.9
Actinidia38655 Actinidia chinensis HOM05D001050 ORTHO05D008289 3.1e-11 72.8 47 72.3
Cre10.g457550 Chlamydomonas reinhardtii HOM05D001050 ORTHO05D008289 1.2e-10 70.9 110 36.4
Oeu039692.1 Olea europaea HOM05D001050 ORTHO05D008289 1.0e-06 57.8 39 74.4
Aa31LG10G11330 Aethionema arabicum HOM05D001050 ORTHO05D001270 4.0e-06 55.8 101 35.6
Pp3c17_4970 Physcomitrium patens HOM05D001050 ORTHO05D001270 5.2e-06 55.5 123 30.9
MCO09G116 Micromonas commoda HOM05D001050 ORTHO05D008289 6.8e-06 55.1 73 41.1
MCO09G720 Micromonas commoda HOM05D001050 ORTHO05D001270 8.8e-06 54.7 65 40.0


User provided reference genes

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