Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold46G17331 Striga asiatica HOM05D001549 ORTHO05D005557 4.8e-66 254.2 117 100.0
SalBow2G1760 Salvia bowleyana HOM05D001549 ORTHO05D005557 8.0e-45 183.7 114 77.2
SalBow1G1414 Salvia bowleyana HOM05D001549 ORTHO05D005557 2.3e-44 182.2 114 77.2
Migut.L00788 Erythranthe guttata HOM05D001549 ORTHO05D005557 7.5e-43 177.2 114 74.6
Nitab4.5_0000146g0180 Nicotiana tabacum HOM05D001549 ORTHO05D005557 1.7e-42 176.0 114 70.2
Migut.L00842 Erythranthe guttata HOM05D001549 ORTHO05D005557 2.8e-42 175.3 114 73.7
Nitab4.5_0003448g0010 Nicotiana tabacum HOM05D001549 ORTHO05D005557 3.7e-42 174.9 114 70.2
CiPaw.15G000600 Carya illinoinensis HOM05D001549 ORTHO05D005557 8.3e-42 173.7 114 66.7
Cc11_g04170 Coffea canephora HOM05D001549 ORTHO05D005557 1.1e-41 173.3 114 69.3
Solyc02g050240.4 Solanum lycopersicum HOM05D001549 ORTHO05D005557 1.8e-41 172.6 114 67.5
Sopen02g008530 Solanum pennellii HOM05D001549 ORTHO05D005557 1.8e-41 172.6 114 67.5
Prupe.1G351000 Prunus persica HOM05D001549 ORTHO05D005557 2.4e-41 172.2 116 69.0
GSVIVG01034358001 Vitis vinifera HOM05D001549 ORTHO05D005557 2.4e-41 172.2 114 71.9
CSS0047743 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 3.1e-41 171.8 114 68.4
TAR629G1676 Trochodendron aralioides HOM05D001549 ORTHO05D005557 4.1e-41 171.4 114 69.3
MSTRG.425 Avicennia marina HOM05D001549 ORTHO05D005557 5.4e-41 171.0 114 71.9
Cfa018671 Carpinus fangiana HOM05D001549 ORTHO05D005557 5.4e-41 171.0 115 67.0
GSVIVG01034359001 Vitis vinifera HOM05D001549 ORTHO05D005557 7.0e-41 170.6 114 71.1
Prupe.1G351200 Prunus persica HOM05D001549 ORTHO05D005557 1.2e-40 169.9 116 67.2
Gohir.A04G109500 Gossypium hirsutum HOM05D001549 ORTHO05D005557 1.6e-40 169.5 114 66.7
DCAR_026873 Daucus carota HOM05D001549 ORTHO05D005557 2.0e-40 169.1 112 68.8
Eucgr.G02608 Eucalyptus grandis HOM05D001549 ORTHO05D005557 2.0e-40 169.1 114 67.5
Nn4g25180 Nelumbo nucifera HOM05D001549 ORTHO05D005557 2.0e-40 169.1 114 67.5
Lsat_1_v5_gn_6_17661 Lactuca sativa HOM05D001549 ORTHO05D005557 3.5e-40 168.3 114 68.4
Sc25g0001420 Simmondsia chinensis HOM05D001549 ORTHO05D005557 3.5e-40 168.3 114 67.5
Haze_17399 Corylus avellana HOM05D001549 ORTHO05D005557 4.5e-40 167.9 115 65.2
MD16G1004600 Malus domestica HOM05D001549 ORTHO05D005557 4.5e-40 167.9 120 65.8
arahy.Tifrunner.gnm1.ann1.9J2F9Q Arachis hypogaea HOM05D001549 ORTHO05D005557 5.9e-40 167.5 114 64.9
BcaB04g17256 Brassica carinata HOM05D001549 ORTHO05D005557 5.9e-40 167.5 114 64.9
CAN.G739.7 Capsicum annuum HOM05D001549 ORTHO05D005557 5.9e-40 167.5 114 67.5
PGR142G2256 Punica granatum HOM05D001549 ORTHO05D005557 5.9e-40 167.5 114 68.4
Gorai.012G136300 Gossypium raimondii HOM05D001549 ORTHO05D005557 7.7e-40 167.2 114 65.8
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 7.7e-40 167.2 114 68.4
arahy.Tifrunner.gnm1.ann1.UW2LYQ Arachis hypogaea HOM05D001549 ORTHO05D005557 1.0e-39 166.8 114 64.9
Eucgr.G02611 Eucalyptus grandis HOM05D001549 ORTHO05D005557 1.3e-39 166.4 114 66.7
Duzib132G0881 Durio zibethinus HOM05D001549 ORTHO05D005557 1.7e-39 166.0 114 65.8
Gohir.D04G149700 Gossypium hirsutum HOM05D001549 ORTHO05D005557 2.3e-39 165.6 114 64.9
Lj5g0017773 Lotus japonicus HOM05D001549 ORTHO05D005557 2.3e-39 165.6 114 65.8
Potri.007G001300 Populus trichocarpa HOM05D001549 ORTHO05D005557 3.8e-39 164.9 115 65.2
ECA233G5707 Erigeron canadensis HOM05D001549 ORTHO05D005557 6.6e-39 164.1 113 68.1
FvH4_4g37301 Fragaria vesca HOM05D001549 ORTHO05D005557 6.6e-39 164.1 114 67.5
Lj3C845T4 Lonicera japonica HOM05D001549 ORTHO05D005557 6.6e-39 164.1 117 66.7
Phvul.007G012500 Phaseolus vulgaris HOM05D001549 ORTHO05D005557 8.6e-39 163.7 114 64.9
MELO3C011764.2 Cucumis melo HOM05D001549 ORTHO05D005557 1.1e-38 163.3 115 66.1
VMungo0720G2183 Vigna mungo HOM05D001549 ORTHO05D005557 1.5e-38 162.9 114 64.9
Actinidia04366 Actinidia chinensis HOM05D001549 ORTHO05D005557 1.9e-38 162.5 114 66.7
ECA233G6260 Erigeron canadensis HOM05D001549 ORTHO05D005557 5.5e-38 161.0 113 66.4
TWI53G1100 Tripterygium wilfordii HOM05D001549 ORTHO05D005557 5.5e-38 161.0 114 62.3
Rhsim12G0073200 Rhododendron simsii HOM05D001549 ORTHO05D005557 7.2e-38 160.6 114 66.7
CsaV3_5G029120 Cucumis sativus L. HOM05D001549 ORTHO05D005557 9.5e-38 160.2 115 64.3
Glyma.20G100400 Glycine max HOM05D001549 ORTHO05D005557 1.2e-37 159.8 114 63.2
RcHm_v2.0_Chr4g0447131 Rosa chinensis HOM05D001549 ORTHO05D005557 1.2e-37 159.8 114 65.8
Sabra07G0001000 Salix brachista HOM05D001549 ORTHO05D005557 1.2e-37 159.8 115 61.7
MBI03_g13442_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 1.6e-37 159.5 114 62.3
Ca_11276_v3 Cicer arietinum L. HOM05D001549 ORTHO05D005557 2.1e-37 159.1 114 62.3
Lalb_Chr02g0144131 Lupinus albus HOM05D001549 ORTHO05D005557 2.8e-37 158.7 114 62.3
AL1G58024 Arabidopsis lyrata HOM05D001549 ORTHO05D005557 3.6e-37 158.3 114 63.2
Carub.0001s3946 Capsella rubella HOM05D001549 ORTHO05D005557 3.6e-37 158.3 114 62.3
ATR0124G045 Amborella trichopoda HOM05D001549 ORTHO05D005557 6.1e-37 157.5 114 62.3
AT1G50380 Arabidopsis thaliana HOM05D001549 ORTHO05D005557 6.1e-37 157.5 114 61.4
Thhalv10011253m.g Eutrema salsugineum HOM05D001549 ORTHO05D005557 6.1e-37 157.5 114 62.3
Aa31LG10G3900 Aethionema arabicum HOM05D001549 ORTHO05D005557 8.0e-37 157.1 114 63.2
QL01p000406 Quercus lobata HOM05D001549 ORTHO05D005557 8.0e-37 157.1 114 62.3
QL01p000526 Quercus lobata HOM05D001549 ORTHO05D005557 8.0e-37 157.1 114 62.3
THA.LOC104815249 Tarenaya hassleriana HOM05D001549 ORTHO05D005557 8.0e-37 157.1 114 63.2
AUR62032901 Chenopodium quinoa HOM05D001549 ORTHO05D005557 1.0e-36 156.8 115 61.7
Atru.chr11.52 Acer truncatum HOM05D001549 ORTHO05D005557 1.4e-36 156.4 114 62.3
C06p05570 Brassica napus HOM05D001549 ORTHO05D005557 1.4e-36 156.4 114 61.4
BolC6t35663H Brassica oleracea HOM05D001549 ORTHO05D005557 1.4e-36 156.4 114 61.4
Ah.01g011570 Amaranthus hybridus HOM05D001549 ORTHO05D005557 1.8e-36 156.0 114 61.4
A06p03180 Brassica napus HOM05D001549 ORTHO05D005557 1.8e-36 156.0 114 61.4
Lalb_Chr21g0307441 Lupinus albus HOM05D001549 ORTHO05D005557 1.8e-36 156.0 113 61.9
Psat6g235720 Pisum sativum HOM05D001549 ORTHO05D005557 1.8e-36 156.0 114 61.4
Sed0013808 Sechium edule HOM05D001549 ORTHO05D005557 1.8e-36 156.0 114 64.0
TPR.G4142 Trifolium pratense HOM05D001549 ORTHO05D005557 3.0e-36 155.2 114 61.4
BcaC01g01225 Brassica carinata HOM05D001549 ORTHO05D005557 4.0e-36 154.8 114 62.3
BolC3t21274H Brassica oleracea HOM05D001549 ORTHO05D005557 4.0e-36 154.8 114 62.3
BraA06t23529Z Brassica rapa HOM05D001549 ORTHO05D005557 4.0e-36 154.8 114 61.4
PSO170G0691 Papaver somniferum HOM05D001549 ORTHO05D005557 4.0e-36 154.8 115 60.0
Hund05502 Selenicereus undatus HOM05D001549 ORTHO05D005557 4.0e-36 154.8 114 63.2
Ciclev10014380m.g Citrus clementina HOM05D001549 ORTHO05D005557 5.2e-36 154.5 114 60.5
Atru.chr11.48 Acer truncatum HOM05D001549 ORTHO05D005557 6.8e-36 154.1 114 61.4
EL10Ac9g23012 Beta vulgaris HOM05D001549 ORTHO05D005557 6.8e-36 154.1 114 60.5
Os06g0730600 Oryza sativa ssp. japonica HOM05D001549 ORTHO05D005557 6.8e-36 154.1 111 64.9
C03p89610 Brassica napus HOM05D001549 ORTHO05D005557 8.9e-36 153.7 114 61.4
PSO017G4045 Papaver somniferum HOM05D001549 ORTHO05D005557 8.9e-36 153.7 115 59.1
A08p03180 Brassica napus HOM05D001549 ORTHO05D005557 1.2e-35 153.3 114 61.4
BraA08t32351Z Brassica rapa HOM05D001549 ORTHO05D005557 1.2e-35 153.3 114 61.4
MBI03_g13443_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 1.2e-35 153.3 114 59.6
Zm00001eb271750 Zea mays HOM05D001549 ORTHO05D005557 1.2e-35 153.3 111 64.9
Aqoxy5G00260 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 1.5e-35 152.9 114 61.4
CDE04G0096 Ceratophyllum demersum HOM05D001549 ORTHO05D005557 2.0e-35 152.5 114 60.5
Sp1g37210 Schrenkiella parvula HOM05D001549 ORTHO05D005557 2.0e-35 152.5 114 59.6
HPP92_022058 Vanilla planifolia HOM05D001549 ORTHO05D005557 2.0e-35 152.5 113 61.9
ATR0124G037 Amborella trichopoda HOM05D001549 ORTHO05D005557 3.4e-35 151.8 114 59.6
vmacro16217 Vaccinium macrocarpon HOM05D001549 ORTHO05D005557 3.4e-35 151.8 135 56.3
CARHR040400 Cardamine hirsuta HOM05D001549 ORTHO05D005557 5.7e-35 151.0 114 61.4
Cpa.g.sc221.18 Carica papaya HOM05D001549 ORTHO05D005557 1.3e-34 149.8 114 58.8
Manes.04G161300 Manihot esculenta HOM05D001549 ORTHO05D005557 2.2e-34 149.1 114 58.8
ClCG11G012740 Citrullus lanatus HOM05D001549 ORTHO05D005557 8.3e-34 147.1 130 56.2
HanXRQChr17g0558111 Helianthus annuus HOM05D001549 ORTHO05D005557 1.1e-33 146.7 110 63.6
CANSAT78G2104 Cannabis sativa HOM05D001549 ORTHO05D005557 1.8e-33 146.0 111 59.5
Manes.11G000600 Manihot esculenta HOM05D001549 ORTHO05D005557 1.2e-32 143.3 114 59.6
Peaxi162Scf00900g00016 Petunia axillaris HOM05D001549 ORTHO05D005557 2.6e-27 125.6 114 55.3
Dinv02496 Davidia involucrata HOM05D001549 ORTHO05D005557 1.1e-25 120.2 80 68.8
FAN17G2050 Fragaria x ananassa HOM05D001549 ORTHO05D005557 1.9e-25 119.4 115 52.2
AagrBONN_evm.TU.Sc2ySwM_117.1347 Anthoceros agrestis HOM05D001549 ORTHO05D005557 4.6e-24 114.8 114 46.5
Mapoly0011s0194 Marchantia polymorpha HOM05D001549 ORTHO05D005557 4.6e-24 114.8 114 47.4
CSS0019717 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 1.0e-23 113.6 82 64.6
Ciclev10018222m.g Citrus clementina HOM05D001549 ORTHO05D005557 1.7e-23 112.8 114 47.4
SHI21178 Sapria himalayana HOM05D001549 ORTHO05D005557 3.9e-23 111.7 163 39.3
QL01p000509 Quercus lobata HOM05D001549 ORTHO05D005557 5.0e-23 111.3 99 53.5
Pp3c6_15290 Physcomitrium patens HOM05D001549 ORTHO05D005557 1.1e-22 110.2 112 42.9
Aqoxy3G00003 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 2.1e-21 105.9 119 47.9
CBR_g41177 Chara braunii HOM05D000019 ORTHO05D000002 6.8e-20 100.9 89 49.4
SMO146G0169 Selaginella moellendorffii HOM05D001549 ORTHO05D005557 9.8e-19 97.1 109 41.3
Medtr1g115230 Medicago truncatula HOM05D001549 ORTHO05D005557 2.2e-18 95.9 75 57.3
Cre17.g697650 Chlamydomonas reinhardtii HOM05D001549 ORTHO05D005557 3.7e-18 95.1 92 47.8
Oeu027933.1 Olea europaea HOM05D001549 ORTHO05D005557 2.7e-16 89.0 63 68.3
COL.COLO4_33142 Corchorus olitorius HOM05D001549 ORTHO05D005557 4.6e-16 88.2 114 42.1
SEGI_15512 Sequoiadendron giganteum HOM05D001549 ORTHO05D005557 4.3e-14 81.6 74 51.4
DCAR_026867 Daucus carota HOM05D001549 ORTHO05D005557 9.9e-11 70.5 44 70.5
HPP92_022044 Vanilla planifolia HOM05D001549 ORTHO05D005557 2.9e-10 68.9 110 37.3
MCO13G269 Micromonas commoda HOM05D001549 ORTHO05D005557 6.4e-10 67.8 79 43.0
CAN.G1507.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-09 66.2 57 54.4
PRCOL_00006655 Prasinoderma coloniale HOM05D001549 ORTHO05D005557 2.4e-09 65.9 89 40.4
SMO146G0052 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 1.9e-06 56.2 75 34.7
CDE02G1645 Ceratophyllum demersum HOM05D001549 ORTHO05D003098 5.6e-06 54.7 103 30.1
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 7.3e-06 54.3 75 34.7
SGA_v2.0_scaffold204G41617 Striga asiatica HOM05D001549 ORTHO05D003098 9.5e-06 53.9 86 33.7


User provided reference genes

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