Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold469G52063 Striga asiatica HOM05D000083 ORTHO05D030684 1.3e-60 236.1 115 100.0
SGA_v2.0_scaffold90G27605 Striga asiatica HOM05D000083 ORTHO05D030684 1.5e-24 116.3 103 65.0
SGA_v2.0_scaffold363G49940 Striga asiatica HOM05D000083 ORTHO05D000196 1.1e-22 110.2 142 48.6
SGA_v2.0_scaffold8G04341 Striga asiatica HOM05D000083 ORTHO05D000196 1.7e-15 86.3 130 44.6
Migut.M01738 Erythranthe guttata HOM05D000083 ORTHO05D000196 4.6e-13 78.2 134 35.1
MSTRG.6938 Avicennia marina HOM05D000083 ORTHO05D000196 1.4e-12 76.6 148 33.8
Migut.H01812 Erythranthe guttata HOM05D000083 ORTHO05D000196 5.7e-11 71.2 127 35.4
MSTRG.14442 Avicennia marina HOM05D000083 ORTHO05D000196 3.7e-10 68.6 134 34.3
Oeu041835.2 Olea europaea HOM05D000083 ORTHO05D000196 3.7e-10 68.6 86 43.0
CiPaw.11G192100 Carya illinoinensis HOM05D000083 ORTHO05D000196 1.8e-09 66.2 130 30.0
BraA03t10724Z Brassica rapa HOM05D000083 ORTHO05D000196 6.9e-09 64.3 129 29.5
Peaxi162Scf00235g00418 Petunia axillaris HOM05D000083 ORTHO05D000196 9.1e-09 63.9 130 32.3
A03p14270 Brassica napus HOM05D000083 ORTHO05D000196 1.5e-08 63.2 129 29.5
CiPaw.12G131700 Carya illinoinensis HOM05D000083 ORTHO05D000196 2.0e-08 62.8 136 30.9
Dinv22248 Davidia involucrata HOM05D000083 ORTHO05D000196 2.0e-08 62.8 75 38.7
HanXRQChr04g0127111 Helianthus annuus HOM05D000083 ORTHO05D000196 2.6e-08 62.4 81 34.6
MD11G1213700 Malus domestica HOM05D000083 ORTHO05D000196 2.6e-08 62.4 66 43.9
C03p16660 Brassica napus HOM05D000083 ORTHO05D000196 3.4e-08 62.0 129 27.9
Nitab4.5_0008150g0020 Nicotiana tabacum HOM05D000083 ORTHO05D000196 4.5e-08 61.6 85 37.6
MD00G1159200 Malus domestica HOM05D000083 ORTHO05D000196 7.7e-08 60.8 66 42.4
A08p20670 Brassica napus HOM05D000083 ORTHO05D000196 1.0e-07 60.5 73 41.1
CAN.G337.71 Capsicum annuum HOM05D000083 ORTHO05D000196 1.0e-07 60.5 75 40.0
ClCG09G010940 Citrullus lanatus HOM05D000083 ORTHO05D000196 1.0e-07 60.5 127 29.1
Carub.0008s1538 Capsella rubella HOM05D000083 ORTHO05D000196 1.3e-07 60.1 72 40.3
Cc06_g20870 Coffea canephora HOM05D000083 ORTHO05D000196 1.3e-07 60.1 146 27.4
Nitab4.5_0000328g0110 Nicotiana tabacum HOM05D000083 ORTHO05D000196 1.3e-07 60.1 75 38.7
Prupe.4G217600 Prunus persica HOM05D000083 ORTHO05D000196 1.3e-07 60.1 66 40.9
BcaB08g35871 Brassica carinata HOM05D000083 ORTHO05D000196 1.7e-07 59.7 77 36.4
SGA_v2.0_scaffold149G36554 Striga asiatica HOM05D038280 ORTHO05D030684 1.7e-07 59.7 30 86.7
Actinidia05079 Actinidia chinensis HOM05D000083 ORTHO05D000196 2.2e-07 59.3 74 39.2
Actinidia32257 Actinidia chinensis HOM05D000083 ORTHO05D000196 2.2e-07 59.3 74 39.2
AT5G55090 Arabidopsis thaliana HOM05D000083 ORTHO05D000196 2.2e-07 59.3 74 37.8
Dinv40778 Davidia involucrata HOM05D000083 ORTHO05D000196 2.2e-07 59.3 85 36.5
Sp6g17020 Schrenkiella parvula HOM05D000083 ORTHO05D000196 2.2e-07 59.3 73 38.4
TAR627G1192 Trochodendron aralioides HOM05D000083 ORTHO05D000196 2.2e-07 59.3 75 36.0
HPP92_024589 Vanilla planifolia HOM05D000083 ORTHO05D030684 2.2e-07 59.3 71 39.4
Duzib213G0097 Durio zibethinus HOM05D000083 ORTHO05D000196 2.9e-07 58.9 84 35.7
Ciclev10010150m.g Citrus clementina HOM05D000083 ORTHO05D000196 3.8e-07 58.5 136 30.9
Gohir.D01G068800 Gossypium hirsutum HOM05D000083 ORTHO05D000196 3.8e-07 58.5 84 35.7
Gorai.002G091000 Gossypium raimondii HOM05D000083 ORTHO05D000196 3.8e-07 58.5 84 35.7
Lsat_1_v5_gn_7_91420 Lactuca sativa HOM05D000083 ORTHO05D000196 5.0e-07 58.2 80 31.2
CARHR268430 Cardamine hirsuta HOM05D000083 ORTHO05D000196 6.5e-07 57.8 77 40.3
Oeu024916.1 Olea europaea HOM05D000083 ORTHO05D000196 6.5e-07 57.8 73 38.4
unitig_85.g27330 Utricularia gibba HOM05D000083 ORTHO05D000196 6.5e-07 57.8 66 40.9
BcaB03g12513 Brassica carinata HOM05D000083 ORTHO05D000196 8.5e-07 57.4 76 35.5
COL.COLO4_09687 Corchorus olitorius HOM05D000083 ORTHO05D000196 8.5e-07 57.4 74 35.1
Sed0009187 Sechium edule HOM05D000083 ORTHO05D000196 8.5e-07 57.4 125 28.8
A01p18100 Brassica napus HOM05D000083 ORTHO05D000196 1.1e-06 57.0 66 40.9
BraA01t01765Z Brassica rapa HOM05D000083 ORTHO05D000196 1.1e-06 57.0 66 40.9
Cfa020312 Carpinus fangiana HOM05D000083 ORTHO05D000196 1.1e-06 57.0 137 30.7
Thhalv10015237m.g Eutrema salsugineum HOM05D000083 ORTHO05D000196 1.1e-06 57.0 79 36.7
Gohir.A01G082200 Gossypium hirsutum HOM05D000083 ORTHO05D000196 1.1e-06 57.0 84 34.5
HanXRQChr16g0506821 Helianthus annuus HOM05D000083 ORTHO05D000196 1.1e-06 57.0 83 32.5
PGSC0003DMG400022210 Solanum tuberosum HOM05D000083 ORTHO05D000196 1.1e-06 57.0 69 42.0
Thecc.07G032700 Theobroma cacao HOM05D000083 ORTHO05D000196 1.1e-06 57.0 75 36.0
HPP92_024517 Vanilla planifolia HOM05D000083 ORTHO05D000196 1.1e-06 57.0 71 38.0
AL8G30590 Arabidopsis lyrata HOM05D000083 ORTHO05D000196 1.4e-06 56.6 72 37.5
C02p16460 Brassica napus HOM05D000083 ORTHO05D000196 1.4e-06 56.6 72 36.1
MELO3C013150.2 Cucumis melo HOM05D000083 ORTHO05D000196 1.4e-06 56.6 73 34.2
Lj8P170T61 Lonicera japonica HOM05D000083 ORTHO05D000196 1.4e-06 56.6 75 34.7
unitig_62.g23288 Utricularia gibba HOM05D000083 ORTHO05D000196 1.4e-06 56.6 66 39.4
CSS0041113 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D000196 1.9e-06 56.2 75 34.7
CANSAT11G2704 Cannabis sativa HOM05D000083 ORTHO05D000196 1.9e-06 56.2 75 33.3
Duzib268G0720 Durio zibethinus HOM05D000083 ORTHO05D000196 1.9e-06 56.2 82 35.4
Lsat_1_v5_gn_7_98441 Lactuca sativa HOM05D000083 ORTHO05D000196 1.9e-06 56.2 80 30.0
Hma1.2p1_0036F.1_g023420 Hydrangea macrophylla HOM05D000083 ORTHO05D000196 2.5e-06 55.8 74 35.1
Sp7g24840 Schrenkiella parvula HOM05D000083 ORTHO05D000196 2.5e-06 55.8 69 39.1
Actinidia26613 Actinidia chinensis HOM05D000083 ORTHO05D000196 3.2e-06 55.5 75 37.3
C01p23060 Brassica napus HOM05D000083 ORTHO05D000196 3.2e-06 55.5 75 36.0
CSS0003883 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D000196 3.2e-06 55.5 75 33.3
CSS0032348 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D000196 3.2e-06 55.5 75 33.3
Aqoxy1G03375 Aquilegia oxysepala HOM05D000083 ORTHO05D000196 4.2e-06 55.1 66 37.9
ECA236G4322 Erigeron canadensis HOM05D000083 ORTHO05D000196 4.2e-06 55.1 77 32.5
Aa31LG3G11020 Aethionema arabicum HOM05D000083 ORTHO05D000196 5.5e-06 54.7 133 27.8
BraA08t34021Z Brassica rapa HOM05D000083 ORTHO05D000196 5.5e-06 54.7 73 37.0
ClCG02G002020 Citrullus lanatus HOM05D000083 ORTHO05D000196 5.5e-06 54.7 75 36.0
Duzib170G0411 Durio zibethinus HOM05D000083 ORTHO05D000196 5.5e-06 54.7 74 35.1
QL08p009271 Quercus lobata HOM05D000083 ORTHO05D000196 5.5e-06 54.7 75 34.7
AT4G26890 Arabidopsis thaliana HOM05D000083 ORTHO05D000196 7.2e-06 54.3 72 36.1
arahy.Tifrunner.gnm1.ann1.UIR2ZL Arachis hypogaea HOM05D000083 ORTHO05D000196 7.2e-06 54.3 79 32.9
Haze_09706 Corylus avellana HOM05D000083 ORTHO05D000196 7.2e-06 54.3 85 36.5
A02p09900 Brassica napus HOM05D000083 ORTHO05D000196 9.4e-06 53.9 69 36.2
C08p10010 Brassica napus HOM05D000083 ORTHO05D000196 9.4e-06 53.9 71 36.6
BolC8t48680H Brassica oleracea HOM05D000083 ORTHO05D000196 9.4e-06 53.9 71 36.6
CANSAT64G0579 Cannabis sativa HOM05D000083 ORTHO05D000196 9.4e-06 53.9 73 32.9
FAN16G0398 Fragaria x ananassa HOM05D000083 ORTHO05D000196 9.4e-06 53.9 61 41.0
FAN25G0733 Fragaria x ananassa HOM05D000083 ORTHO05D000196 9.4e-06 53.9 61 41.0
Nn1g07213 Nelumbo nucifera HOM05D000083 ORTHO05D000196 9.4e-06 53.9 75 34.7


User provided reference genes

Program Settings