Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 1.1e-101 373.2 189 100.0
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 7.5e-69 264.2 210 69.5
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 5.6e-48 194.9 131 74.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 7.3e-48 194.5 106 92.5
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 9.5e-48 194.1 149 72.5
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.1e-47 193.0 133 74.4
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.1e-47 193.0 108 90.7
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.1e-47 193.0 108 90.7
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 3.6e-47 192.2 118 82.2
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 4.7e-47 191.8 182 59.3
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 6.2e-47 191.4 151 65.6
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 6.2e-47 191.4 108 88.0
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 8.1e-47 191.0 144 71.5
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 8.1e-47 191.0 121 81.0
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 8.1e-47 191.0 155 67.7
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 1.1e-46 190.7 120 80.8
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.1e-46 190.7 135 71.9
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.8e-46 189.9 120 80.0
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 2.4e-46 189.5 107 87.9
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 3.1e-46 189.1 130 76.2
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 4.0e-46 188.7 189 59.3
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 5.2e-46 188.3 151 65.6
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 5.2e-46 188.3 141 72.3
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 5.2e-46 188.3 103 90.3
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 5.2e-46 188.3 107 86.9
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 6.8e-46 188.0 177 62.7
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 8.9e-46 187.6 120 80.0
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 8.9e-46 187.6 128 76.6
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 8.9e-46 187.6 127 75.6
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 8.9e-46 187.6 120 79.2
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 1.2e-45 187.2 137 73.0
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.2e-45 187.2 108 85.2
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.5e-45 186.8 109 85.3
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.5e-45 186.8 140 70.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.6e-45 186.0 128 75.8
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.6e-45 186.0 128 75.8
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 3.4e-45 185.7 107 86.0
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 4.4e-45 185.3 157 63.7
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 4.4e-45 185.3 153 64.1
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 4.4e-45 185.3 153 64.1
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 4.4e-45 185.3 153 64.1
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 4.4e-45 185.3 108 84.3
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 4.4e-45 185.3 118 78.8
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 4.4e-45 185.3 131 71.8
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 4.4e-45 185.3 108 85.2
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 5.8e-45 184.9 131 72.5
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 5.8e-45 184.9 108 86.1
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 7.6e-45 184.5 121 78.5
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 7.6e-45 184.5 101 91.1
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 9.9e-45 184.1 109 84.4
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.3e-44 183.7 106 84.9
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.3e-44 183.7 117 81.2
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.2e-44 183.0 108 83.3
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 2.2e-44 183.0 199 53.8
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.2e-44 183.0 107 86.0
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 2.9e-44 182.6 107 83.2
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 3.8e-44 182.2 107 83.2
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 3.8e-44 182.2 107 85.0
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 3.8e-44 182.2 107 85.0
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 6.4e-44 181.4 159 63.5
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 6.4e-44 181.4 102 86.3
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 6.4e-44 181.4 111 82.0
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 6.4e-44 181.4 108 83.3
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 6.4e-44 181.4 117 81.2
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.1e-43 180.6 101 89.1
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.4e-43 180.3 104 84.6
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.4e-43 180.3 107 84.1
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.9e-43 179.9 104 85.6
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.4e-43 179.5 107 80.4
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.4e-43 179.5 154 65.6
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 2.4e-43 179.5 149 65.1
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.4e-43 179.5 108 81.5
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 3.2e-43 179.1 139 66.2
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 3.2e-43 179.1 139 66.2
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 3.2e-43 179.1 143 67.1
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 4.2e-43 178.7 107 82.2
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 4.2e-43 178.7 107 83.2
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 4.2e-43 178.7 203 53.7
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 4.2e-43 178.7 105 81.9
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 4.2e-43 178.7 144 65.3
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 7.1e-43 177.9 107 79.4
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 7.1e-43 177.9 107 79.4
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 7.1e-43 177.9 107 79.4
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 7.1e-43 177.9 144 65.3
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 9.2e-43 177.6 108 79.6
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 9.2e-43 177.6 142 68.3
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.2e-42 177.2 104 84.6
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 7.8e-42 174.5 107 81.3
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 7.8e-42 174.5 103 81.6
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 1.3e-41 173.7 104 82.7
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.3e-41 173.7 107 80.4
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.3e-41 173.7 104 82.7
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 3.9e-41 172.2 107 78.5
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 8.7e-41 171.0 104 82.7
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 8.7e-41 171.0 139 62.6
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.5e-40 170.2 109 78.9
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.5e-40 169.5 109 78.0
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 1.6e-39 166.8 102 77.5
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 2.1e-39 166.4 168 58.3
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.8e-39 166.0 102 79.4
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 8.1e-39 164.5 103 78.6
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 7.8e-34 147.9 134 57.5
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 3.3e-32 142.5 85 80.0
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 9.6e-32 141.0 103 68.0
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.3e-31 140.6 103 67.0
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.1e-31 139.8 106 63.2
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.5e-29 133.7 71 88.7
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 3.8e-28 129.0 132 52.3
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 7.1e-27 124.8 78 75.6
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 2.1e-23 113.2 63 85.7
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 3.8e-20 102.4 156 36.5
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.0e-17 94.4 56 83.9
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 1.6e-15 87.0 74 54.1
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 4.8e-15 85.5 62 71.0
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 2.4e-14 83.2 44 84.1
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.9e-12 75.5 44 77.3
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 9.3e-11 71.2 45 73.3


User provided reference genes

Program Settings