Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 3.8e-199 698.0 357 100.0
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 2.4e-108 396.4 264 76.5
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 4.2e-97 359.0 285 67.4
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 5.5e-97 358.6 285 67.0
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 3.5e-91 339.3 263 68.1
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 6.5e-90 335.1 264 67.4
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 1.3e-85 320.9 251 63.7
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 2.4e-84 316.6 262 60.7
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 7.0e-84 315.1 253 64.8
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 9.2e-84 314.7 248 64.5
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 9.2e-84 314.7 262 63.0
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 9.2e-84 314.7 253 66.8
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.2e-83 314.3 250 64.0
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 1.2e-83 314.3 250 64.4
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 1.6e-83 313.9 253 65.2
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 2.7e-83 313.2 247 62.3
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 2.7e-83 313.2 256 63.7
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 3.5e-83 312.8 249 63.5
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 7.8e-83 311.6 261 62.1
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 7.8e-83 311.6 253 65.2
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 7.8e-83 311.6 251 63.7
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 7.8e-83 311.6 245 64.5
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 1.0e-82 311.2 249 62.2
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 1.0e-82 311.2 263 58.6
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.3e-82 310.8 247 63.6
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 2.3e-82 310.1 250 64.0
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 5.0e-82 308.9 249 63.1
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 8.6e-82 308.1 261 62.1
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 8.6e-82 308.1 246 62.6
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 8.6e-82 308.1 298 54.4
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 1.9e-81 307.0 251 63.3
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 4.7e-80 302.4 195 72.8
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 1.0e-79 301.2 247 62.8
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 1.4e-79 300.8 248 61.7
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 1.4e-79 300.8 247 60.3
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 1.8e-79 300.4 247 61.1
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 2.6e-78 296.6 257 59.1
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 3.4e-78 296.2 246 60.6
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 3.4e-78 296.2 264 58.0
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 4.4e-78 295.8 248 61.3
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 5.7e-78 295.4 259 58.7
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 9.8e-78 294.7 201 70.1
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 9.8e-78 294.7 258 59.3
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 1.7e-77 293.9 248 60.1
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 2.2e-77 293.5 248 59.3
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.2e-77 293.5 248 59.3
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.9e-77 293.1 249 62.2
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 2.9e-77 293.1 251 61.0
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 4.9e-77 292.4 248 61.7
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 1.1e-76 291.2 301 53.2
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.8e-76 290.4 198 70.7
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.8e-76 290.4 229 62.4
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 1.8e-76 290.4 197 69.5
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 1.8e-76 290.4 248 58.9
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.4e-76 290.0 230 64.8
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.4e-76 290.0 247 59.5
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 3.2e-76 289.7 248 60.5
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 5.4e-76 288.9 249 58.2
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 1.2e-75 287.7 198 69.7
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 2.0e-75 287.0 196 69.4
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 2.7e-75 286.6 196 69.4
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 5.9e-75 285.4 249 57.8
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 5.9e-75 285.4 249 57.4
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 7.8e-75 285.0 197 69.0
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 2.3e-74 283.5 263 55.5
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 1.5e-73 280.8 262 58.4
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 1.9e-73 280.4 249 58.2
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 1.9e-73 280.4 249 58.2
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 1.9e-73 280.4 247 59.1
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 2.5e-73 280.0 196 68.4
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 3.3e-73 279.6 196 67.3
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 3.3e-73 279.6 253 58.1
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 9.5e-73 278.1 196 67.9
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 2.1e-72 276.9 179 73.2
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 8.0e-72 275.0 249 57.8
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 8.0e-72 275.0 249 57.4
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 1.4e-71 274.2 210 64.8
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 5.2e-71 272.3 249 57.0
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 3.7e-69 266.2 273 52.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 4.6e-67 259.2 181 67.4
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 3.0e-66 256.5 220 60.9
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 5.0e-66 255.8 249 53.8
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 6.6e-66 255.4 240 58.3
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 6.2e-64 248.8 170 70.0
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 8.1e-64 248.4 168 68.5
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 3.1e-63 246.5 191 61.8
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 4.0e-63 246.1 225 57.8
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 2.1e-59 233.8 158 70.9
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 5.1e-58 229.2 192 58.9
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 1.5e-57 227.6 171 69.0
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 3.6e-56 223.0 206 55.3
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 1.5e-54 217.6 203 53.2
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 2.4e-52 210.3 187 57.8
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 3.2e-52 209.9 230 52.2
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 1.1e-49 201.4 183 57.4
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 2.5e-49 200.3 256 46.9
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 1.2e-46 191.4 179 56.4
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 1.5e-46 191.0 174 55.2
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 2.9e-45 186.8 173 57.2
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 5.4e-44 182.6 237 48.1
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 6.2e-40 169.1 252 42.5
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 3.2e-36 156.8 103 71.8
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 7.1e-36 155.6 96 78.1
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 2.3e-34 150.6 100 71.0
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 7.4e-33 145.6 104 66.3
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 1.6e-32 144.4 210 42.4
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.8e-31 141.0 143 58.0
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 6.9e-31 139.0 190 45.3
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 9.9e-30 135.2 101 63.4
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.1e-28 131.7 97 60.8
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 3.2e-28 130.2 98 64.3
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 2.1e-27 127.5 87 69.0
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 1.8e-26 124.4 101 61.4
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 2.3e-26 124.0 110 55.5
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 8.2e-24 115.5 107 54.2
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 2.3e-18 97.4 79 60.8
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 1.6e-16 91.3 68 66.2
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 6.3e-16 89.4 130 43.1
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 2.4e-15 87.4 65 63.1
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 9.0e-15 85.5 137 39.4
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 3.4e-14 83.6 65 66.2
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-13 80.5 113 44.2
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 2.9e-13 80.5 50 72.0
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 5.5e-12 76.3 54 66.7
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 6.1e-11 72.8 187 28.9


User provided reference genes

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