Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold464G52008 Striga asiatica HOM05D006756 ORTHO05D001869 0.0e+00 1248.8 644 100.0
Migut.K00444 Erythranthe guttata HOM05D006756 ORTHO05D001869 6.6e-133 478.8 612 49.8
SalBow1G7291 Salvia bowleyana HOM05D006756 ORTHO05D001869 1.1e-116 424.9 658 45.7
Oeu058044.1 Olea europaea HOM05D006756 ORTHO05D001869 1.8e-93 347.8 638 40.6
unitig_748.g7157 Utricularia gibba HOM05D006756 ORTHO05D001869 1.4e-90 338.2 606 42.7
Cc06_g08320 Coffea canephora HOM05D006756 ORTHO05D001869 2.9e-88 330.5 619 39.4
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 5.5e-87 326.2 632 40.7
CSS0003155 Camellia sinensis var. sinensis HOM05D006756 ORTHO05D001869 5.3e-82 309.7 615 38.9
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 1.9e-79 301.2 617 37.9
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 8.2e-75 285.8 634 37.4
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 2.0e-73 281.2 618 36.1
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.3e-72 278.5 655 36.2
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 5.0e-72 276.6 656 35.7
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 1.1e-71 275.4 645 37.4
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 1.9e-71 274.6 628 36.3
Manes.14G133500 Manihot esculenta HOM05D006756 ORTHO05D001869 2.5e-71 274.2 648 35.5
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 9.4e-71 272.3 659 34.9
Solyc07g008190.4 Solanum lycopersicum HOM05D006756 ORTHO05D001869 1.6e-70 271.6 617 36.3
Sopen07g004070 Solanum pennellii HOM05D006756 ORTHO05D001869 2.1e-70 271.2 621 36.2
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 8.0e-70 269.2 601 36.1
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 1.7e-67 261.5 641 33.9
Nitab4.5_0006268g0010 Nicotiana tabacum HOM05D006756 ORTHO05D001869 4.8e-67 260.0 671 34.6
Sabra18G0110400 Salix brachista HOM05D006756 ORTHO05D001869 8.2e-67 259.2 517 38.3
CAN.G573.9 Capsicum annuum HOM05D006756 ORTHO05D001869 1.8e-66 258.1 614 35.3
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 1.8e-66 258.1 635 34.6
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 4.1e-66 256.9 629 34.2
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 9.1e-66 255.8 658 35.0
Thecc.09G128500 Theobroma cacao HOM05D006756 ORTHO05D001869 1.6e-65 255.0 596 34.7
Cfa003391 Carpinus fangiana HOM05D006756 ORTHO05D001869 3.5e-65 253.8 607 34.6
Duzib168G2156 Durio zibethinus HOM05D006756 ORTHO05D001869 5.9e-65 253.1 618 34.6
Prupe.7G245100 Prunus persica HOM05D006756 ORTHO05D001869 7.7e-65 252.7 632 36.1
TWI34G1307 Tripterygium wilfordii HOM05D006756 ORTHO05D001869 2.2e-64 251.1 633 33.6
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 1.1e-63 248.8 619 36.3
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 1.5e-63 248.4 632 35.0
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 2.1e-62 244.6 657 33.8
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 6.1e-62 243.0 712 32.0
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 4.0e-61 240.4 592 34.1
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 8.8e-61 239.2 652 34.2
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 8.8e-61 239.2 610 35.4
Nitab4.5_0000028g0240 Nicotiana tabacum HOM05D006756 ORTHO05D001869 5.4e-58 229.9 752 30.2
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 2.7e-57 227.6 620 33.4
FvH4_1g03050 Fragaria vesca HOM05D006756 ORTHO05D001869 2.2e-56 224.6 642 33.6
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 5.0e-56 223.4 617 33.4
CsaV3_1G030330 Cucumis sativus L. HOM05D006756 ORTHO05D001869 1.1e-55 222.2 608 34.5
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 2.5e-55 221.1 614 33.9
Sed0004031 Sechium edule HOM05D006756 ORTHO05D001869 4.2e-55 220.3 612 33.3
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 5.5e-55 219.9 604 34.8
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 1.6e-54 218.4 611 34.7
Eucgr.C01517 Eucalyptus grandis HOM05D006756 ORTHO05D001869 2.7e-54 217.6 615 31.5
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 4.7e-54 216.9 605 34.4
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 4.7e-54 216.9 625 32.6
Lsat_1_v5_gn_8_58441 Lactuca sativa HOM05D006756 ORTHO05D001869 6.8e-53 213.0 587 34.1
ECA236G0350 Erigeron canadensis HOM05D006756 ORTHO05D001869 8.8e-53 212.6 595 32.3
Haze_25558 Corylus avellana HOM05D006756 ORTHO05D001869 1.5e-52 211.8 709 30.6
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 4.4e-52 210.3 603 33.0
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 7.0e-50 203.0 609 33.5
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 4.5e-49 200.3 601 33.3
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 1.3e-48 198.7 635 30.6
Psat1g024440 Pisum sativum HOM05D006756 ORTHO05D001869 1.7e-48 198.4 622 31.8
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 2.9e-48 197.6 594 32.8
Lj1g0024911 Lotus japonicus HOM05D006756 ORTHO05D001869 6.6e-48 196.4 625 31.2
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 3.3e-47 194.1 623 31.5
TPR.G9536 Trifolium pratense HOM05D006756 ORTHO05D001869 1.6e-46 191.8 619 32.3
Medtr7g033910 Medicago truncatula HOM05D006756 ORTHO05D001869 6.1e-46 189.9 612 30.6
DCAR_017806 Daucus carota HOM05D006756 ORTHO05D001869 1.8e-45 188.3 626 31.8
PGR142G2180 Punica granatum HOM05D006756 ORTHO05D001869 8.9e-45 186.0 618 31.7
Phvul.009G207200 Phaseolus vulgaris HOM05D006756 ORTHO05D001869 1.3e-43 182.2 555 33.0
EL10Ac8g18682 Beta vulgaris HOM05D006756 ORTHO05D001869 1.8e-42 178.3 608 31.7
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 2.4e-42 177.9 632 30.5
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 3.9e-40 170.6 636 29.6
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.5e-39 168.7 560 31.4
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 1.2e-38 165.6 639 27.7
Ah.09g225260 Amaranthus hybridus HOM05D006756 ORTHO05D001869 1.2e-38 165.6 607 30.0
AUR62011148 Chenopodium quinoa HOM05D006756 ORTHO05D001869 1.6e-38 165.2 588 29.3
Duzib150G0144 Durio zibethinus HOM05D006756 ORTHO05D001869 8.9e-37 159.5 355 35.5
PSO170G5619 Papaver somniferum HOM05D006756 ORTHO05D001869 1.5e-36 158.7 533 31.5
AUR62013339 Chenopodium quinoa HOM05D006756 ORTHO05D001869 1.3e-35 155.6 591 29.3
AT5G20200 Arabidopsis thaliana HOM05D006756 ORTHO05D001869 1.7e-35 155.2 645 27.4
CARHR192620 Cardamine hirsuta HOM05D006756 ORTHO05D001869 2.9e-35 154.5 628 28.5
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 3.7e-35 154.1 615 28.8
Sed0021917 Sechium edule HOM05D006756 ORTHO05D001869 3.7e-35 154.1 561 29.6
Thhalv10012771m.g Eutrema salsugineum HOM05D006756 ORTHO05D001869 4.9e-35 153.7 620 29.8
FAN26G0517 Fragaria x ananassa HOM05D006756 ORTHO05D001869 1.1e-34 152.5 630 30.3
FAN23G1563 Fragaria x ananassa HOM05D006756 ORTHO05D001869 2.0e-33 148.3 636 28.9
Carub.0006s1860 Capsella rubella HOM05D006756 ORTHO05D001869 2.7e-33 147.9 643 27.8
FAN28G3026 Fragaria x ananassa HOM05D006756 ORTHO05D001869 1.3e-32 145.6 634 29.5
AL6G31760 Arabidopsis lyrata HOM05D006756 ORTHO05D001869 1.7e-32 145.2 641 27.0
BcaC03g13743 Brassica carinata HOM05D006756 ORTHO05D001869 3.0e-32 144.4 648 27.6
Aqoxy7G02256 Aquilegia oxysepala HOM05D006756 ORTHO05D001869 6.2e-30 136.7 360 31.7
BcaB05g22863 Brassica carinata HOM05D006756 ORTHO05D001869 1.1e-29 136.0 646 28.8
Sp6g24200 Schrenkiella parvula HOM05D006756 ORTHO05D001869 1.1e-29 136.0 621 26.6
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 1.1e-29 136.0 409 30.6
COL.COLO4_35103 Corchorus olitorius HOM05D006756 ORTHO05D001869 4.0e-29 134.0 283 37.5
BraA10t44048Z Brassica rapa HOM05D006756 ORTHO05D001869 9.8e-28 129.4 639 26.9
BcaB08g36540 Brassica carinata HOM05D006756 ORTHO05D001869 2.9e-27 127.9 624 26.4
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.9e-27 127.9 620 27.6
BcaC04g19408 Brassica carinata HOM05D006756 ORTHO05D001869 4.9e-27 127.1 631 27.1
HanXRQChr05g0140241 Helianthus annuus HOM05D006756 ORTHO05D001869 5.1e-24 117.1 239 36.8
Glyma.06G217600 Glycine max HOM05D006756 ORTHO05D001869 1.5e-23 115.5 293 36.2
Dinv41496 Davidia involucrata HOM05D006756 ORTHO05D001869 2.8e-22 111.3 137 48.2
Glyma.06G217700 Glycine max HOM05D006756 ORTHO05D001869 1.4e-21 109.0 218 36.7
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.1e-21 107.8 473 28.5
Gohir.D05G016600 Gossypium hirsutum HOM05D006756 ORTHO05D001869 2.0e-20 105.1 468 28.2
Actinidia40482 Actinidia chinensis HOM05D006756 ORTHO05D001869 7.8e-17 93.2 145 45.5
HanXRQChr05g0140231 Helianthus annuus HOM05D006756 ORTHO05D001869 8.6e-16 89.7 170 38.8
PSO017G1072 Papaver somniferum HOM05D006756 ORTHO05D001869 9.6e-15 86.3 517 28.2
ATR1120G177 Amborella trichopoda HOM05D006756 ORTHO05D001869 3.1e-13 81.3 402 27.4
PSO384G0573 Papaver somniferum HOM05D003044 ORTHO05D001869 3.1e-13 81.3 397 27.0
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 1.5e-12 79.0 380 28.4
FvH4_7g05480 Fragaria vesca HOM05D003044 ORTHO05D001869 3.4e-12 77.8 374 27.0
TWI63G0823 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 5.8e-12 77.0 256 30.1
Zm00001eb386510 Zea mays HOM05D006756 ORTHO05D001869 5.8e-12 77.0 583 22.8
Duzib187G1404 Durio zibethinus HOM05D006756 ORTHO05D001869 2.2e-11 75.1 187 33.7
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 2.9e-11 74.7 395 26.3
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 2.9e-11 74.7 648 25.5
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 3.8e-11 74.3 367 27.8
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 4.9e-11 73.9 373 26.5
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 1.9e-10 72.0 669 23.6
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 2.4e-10 71.6 424 27.4
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 3.2e-10 71.2 449 26.3
FvH4_7g05440 Fragaria vesca HOM05D003044 ORTHO05D001869 1.6e-09 68.9 205 30.2
SGA_v2.0_scaffold90G27707 Striga asiatica HOM05D003044 ORTHO05D001869 2.1e-09 68.6 357 28.0
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 2.7e-09 68.2 396 27.3
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 3.5e-09 67.8 641 22.3
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 3.5e-09 67.8 564 23.9
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 3.5e-09 67.8 339 27.7
Oeu025606.1 Olea europaea HOM05D003044 ORTHO05D001869 6.0e-09 67.0 372 27.2
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 6.0e-09 67.0 369 26.6
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 7.8e-09 66.6 383 26.6
Aqoxy2G00627 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 2.3e-08 65.1 382 23.6
Migut.F00829 Erythranthe guttata HOM05D003044 ORTHO05D001869 3.9e-08 64.3 352 26.4
Peaxi162Scf00120g00721 Petunia axillaris HOM05D003044 ORTHO05D001869 3.9e-08 64.3 383 26.4
Nn2g14384 Nelumbo nucifera HOM05D003044 ORTHO05D001869 5.1e-08 63.9 389 25.2
EL10Ac8g19444 Beta vulgaris HOM05D003044 ORTHO05D001869 8.7e-08 63.2 261 28.0
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 1.5e-07 62.4 397 26.7
Cc02_g09260 Coffea canephora HOM05D003044 ORTHO05D001869 1.5e-07 62.4 379 27.4
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 1.5e-07 62.4 340 27.6
SGA_v2.0_scaffold13G06427 Striga asiatica HOM05D003044 ORTHO05D001869 1.5e-07 62.4 377 27.9
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 2.5e-07 61.6 350 27.1
arahy.Tifrunner.gnm1.ann1.JKR5UJ Arachis hypogaea HOM05D003044 ORTHO05D001869 3.3e-07 61.2 363 25.6
arahy.Tifrunner.gnm1.ann1.Y6HWEI Arachis hypogaea HOM05D003044 ORTHO05D001869 3.3e-07 61.2 363 25.6
FAN03G0021 Fragaria x ananassa HOM05D003044 ORTHO05D001869 3.3e-07 61.2 332 27.1
Lj2A36T50 Lonicera japonica HOM05D003044 ORTHO05D001869 3.3e-07 61.2 354 27.1
MSTRG.27548 Avicennia marina HOM05D003044 ORTHO05D001869 5.6e-07 60.5 377 27.1
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 7.3e-07 60.1 408 26.5
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 7.3e-07 60.1 365 27.7
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 9.6e-07 59.7 403 25.6
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 9.6e-07 59.7 345 26.7
Oeu040012.1 Olea europaea HOM05D003044 ORTHO05D001869 9.6e-07 59.7 406 26.4
FAN10G1738 Fragaria x ananassa HOM05D003044 ORTHO05D001869 1.6e-06 58.9 332 26.8
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 2.1e-06 58.5 470 24.0
CSS0031943 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 2.8e-06 58.2 360 25.6
Nitab4.5_0005247g0010 Nicotiana tabacum HOM05D003044 ORTHO05D001869 3.6e-06 57.8 375 24.0
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 4.8e-06 57.4 387 26.6
TPR.G13387 Trifolium pratense HOM05D003044 ORTHO05D001869 4.8e-06 57.4 204 30.9


User provided reference genes

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