Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 0.0e+00 1690.6 883 100.0
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 0.0e+00 1119.8 830 74.8
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 0.0e+00 1112.4 845 71.1
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 0.0e+00 1111.7 854 71.7
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.7e-293 1010.4 846 65.7
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 7.3e-284 980.7 853 64.5
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 9.3e-263 910.6 853 61.7
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.5e-257 893.3 827 59.6
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 1.1e-250 870.5 847 57.6
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.5e-249 866.7 848 58.5
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 4.7e-246 855.1 825 57.8
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 6.7e-245 851.3 848 56.6
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 2.0e-244 849.7 848 56.5
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.8e-243 845.9 851 55.7
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 3.1e-242 842.4 858 56.3
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 7.0e-242 841.3 841 56.8
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 9.1e-242 840.9 826 57.7
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 5.7e-236 821.6 824 55.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 9.1e-234 814.3 814 57.6
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 7.5e-228 794.7 859 54.4
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 7.7e-225 784.6 864 54.3
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 1.7e-224 783.5 859 53.4
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 8.5e-224 781.2 862 53.7
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 1.5e-223 780.4 860 53.3
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 1.2e-222 777.3 845 53.0
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.4e-221 773.9 800 55.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.2e-221 771.9 846 53.1
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.3e-219 767.3 841 54.2
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.7e-219 766.9 824 54.2
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.7e-219 765.8 866 52.1
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 1.1e-218 764.2 822 53.6
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 7.0e-218 761.5 873 52.1
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 9.1e-218 761.1 840 53.7
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.2e-217 760.8 838 53.5
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 2.0e-217 760.0 845 53.3
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 5.9e-217 758.4 834 53.0
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.3e-216 757.3 899 51.1
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 5.0e-216 755.4 866 52.8
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 6.6e-216 755.0 847 52.5
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.1e-215 754.2 866 52.5
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.2e-215 752.3 846 52.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.2e-214 750.7 850 52.9
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.0e-214 748.0 836 52.2
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.0e-213 746.1 866 52.3
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 3.4e-212 742.7 846 52.4
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 4.4e-212 742.3 850 51.9
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 5.7e-212 741.9 845 52.2
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 5.7e-212 741.9 849 52.7
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.7e-211 740.3 847 52.4
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.1e-210 737.6 846 49.6
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.4e-210 737.3 871 50.9
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.4e-210 737.3 849 51.8
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 9.2e-210 734.6 1001 46.7
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.6e-209 733.8 846 49.6
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 7.8e-209 731.5 846 51.7
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.3e-208 730.7 861 50.3
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 2.9e-208 729.6 850 51.6
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.5e-207 727.2 912 49.7
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 4.3e-207 725.7 832 51.4
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 6.1e-206 721.8 831 51.1
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.4e-205 720.7 846 49.6
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.4e-205 720.7 860 49.9
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.3e-205 719.9 841 51.6
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 4.0e-205 719.2 833 50.5
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 6.8e-205 718.4 824 51.6
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 1.5e-204 717.2 960 46.9
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 3.4e-204 716.1 825 51.3
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 5.8e-204 715.3 848 48.9
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 1.3e-203 714.1 849 50.2
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.7e-203 713.8 702 57.0
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.2e-203 713.4 886 49.4
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.9e-203 713.0 864 49.8
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 1.9e-202 710.3 640 62.5
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 2.4e-202 709.9 846 49.9
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 7.0e-202 708.4 834 48.4
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 4.6e-201 705.7 820 49.4
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 6.0e-201 705.3 844 49.8
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 7.8e-201 704.9 846 49.5
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.5e-199 700.7 847 49.1
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 3.3e-199 699.5 846 49.6
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 7.3e-199 698.4 844 50.6
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 9.5e-199 698.0 845 50.5
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.7e-198 695.7 836 50.4
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 6.2e-198 695.3 956 46.0
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 8.0e-198 694.9 836 50.2
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 8.0e-198 694.9 844 50.0
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.4e-197 694.1 836 50.0
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 6.8e-197 691.8 836 49.8
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 3.4e-196 689.5 817 50.3
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 2.2e-195 686.8 878 48.5
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 2.9e-195 686.4 835 49.7
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 7.1e-194 681.8 702 57.3
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 2.5e-191 673.3 639 60.6
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 6.8e-189 665.2 859 48.3
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 5.8e-188 662.1 835 48.9
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 4.9e-187 659.1 818 49.5
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 2.4e-186 656.8 852 48.0
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 2.4e-186 656.8 886 46.2
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.7e-184 650.6 833 49.9
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 3.0e-184 649.8 851 47.4
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 1.5e-183 647.5 811 49.0
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 5.6e-183 645.6 764 53.5
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 1.1e-181 641.3 823 48.0
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.4e-180 636.0 641 58.5
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 8.4e-179 631.7 841 46.5
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.4e-178 630.9 819 47.1
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.4e-178 629.0 639 58.2
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 4.6e-177 625.9 698 52.3
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 8.1e-174 615.1 845 45.9
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 5.3e-173 612.5 820 45.0
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 6.9e-173 612.1 675 53.2
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 3.8e-171 606.3 808 47.3
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 3.8e-171 606.3 835 44.3
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.6e-169 600.9 921 42.9
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 3.5e-169 599.7 836 44.5
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 5.1e-168 595.9 829 44.5
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 1.6e-166 590.9 835 43.2
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 1.8e-165 587.4 838 44.2
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 2.4e-165 587.0 836 43.5
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 2.0e-164 583.9 834 44.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 2.0e-164 583.9 830 43.3
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 5.8e-164 582.4 835 43.5
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.4e-162 577.8 804 44.2
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.2e-161 574.7 870 43.2
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 3.0e-160 570.1 652 51.8
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 4.3e-159 566.2 844 42.8
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 1.2e-156 558.1 834 42.4
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.3e-155 554.7 638 51.1
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 7.1e-154 548.9 814 42.5
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.2e-153 548.1 586 54.3
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.7e-153 547.0 647 49.6
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 5.1e-152 542.7 834 41.5
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.0e-147 528.5 640 50.8
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 1.9e-146 524.2 831 39.7
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.5e-143 513.8 871 40.6
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.5e-140 504.6 829 39.6
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 2.0e-140 504.2 867 39.9
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 1.4e-130 471.5 464 55.4
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.1e-122 445.3 849 35.6
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 2.7e-121 440.7 837 38.2
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 2.4e-117 427.6 591 45.5
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 9.1e-117 425.6 574 45.1
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 1.6e-116 424.9 590 45.3
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.9e-114 417.9 851 34.2
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.7e-107 394.8 824 35.3
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 2.3e-104 384.4 654 41.1
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.8e-101 374.8 795 38.7
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.4e-95 353.6 440 48.9
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 5.0e-91 340.1 773 33.4
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 9.5e-90 335.9 356 55.3
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.2e-69 267.7 439 41.7
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-59 236.1 654 30.6
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.6e-41 175.6 340 38.5
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.1e-37 162.9 322 39.1
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 1.4e-37 162.5 283 41.3
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 4.2e-37 161.0 299 32.8
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-36 159.5 114 64.9
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.2e-36 159.5 241 38.2
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 1.3e-35 156.0 247 42.9
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.8e-35 155.6 195 48.7
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 9.6e-34 149.8 217 43.8
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 8.2e-33 146.7 271 35.8
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.8e-32 145.6 235 37.0
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 2.4e-32 145.2 153 52.9
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 7.2e-29 133.7 121 60.3
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.5e-26 125.9 139 50.4
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.6e-20 105.9 105 56.2
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.4e-19 102.8 119 46.2
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.1e-16 91.7 105 49.5
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 4.1e-16 91.3 69 63.8
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 1.0e-14 86.7 48 81.2
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.3e-14 86.3 96 46.9
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.2e-14 85.5 121 39.7
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 3.2e-13 81.6 136 41.2
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 5.5e-13 80.9 75 49.3
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.7e-12 77.8 81 53.1
Oeu055964.1 Olea europaea HOM05D001574 ORTHO05D000708 2.3e-11 75.5 68 61.8
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.9e-11 74.7 141 42.6
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 3.9e-11 74.7 81 51.9
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 5.2e-11 74.3 150 36.7
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.5e-10 72.8 149 34.9
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.7e-09 69.3 52 59.6
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 6.3e-09 67.4 90 44.4
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-08 65.9 143 29.4
MBI13_g36809_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D240810 2.6e-07 62.0 47 59.6


User provided reference genes

Program Settings