Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.8e-126 456.1 248 100.0
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 3.4e-85 318.9 248 70.2
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 9.8e-85 317.4 249 71.5
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.9e-83 313.2 249 70.7
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 3.2e-83 312.4 251 67.7
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 4.4e-77 292.0 250 65.6
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 2.6e-69 266.2 257 60.3
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 7.1e-67 258.1 256 62.1
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 9.2e-67 257.7 251 61.4
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 3.0e-65 252.7 257 60.3
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 3.9e-65 252.3 253 58.9
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 6.6e-65 251.5 258 59.3
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 1.2e-63 247.3 252 58.7
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 2.1e-63 246.5 261 55.2
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.1e-62 244.2 259 57.9
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.4e-62 243.8 262 56.1
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 1.8e-62 243.4 256 57.4
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 1.8e-62 243.4 253 58.1
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.4e-62 243.0 258 57.0
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 2.4e-62 243.0 249 59.8
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 3.1e-62 242.7 251 57.8
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 5.2e-62 241.9 206 65.0
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 6.8e-62 241.5 256 58.2
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 8.9e-62 241.1 256 60.5
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 2.0e-61 240.0 251 59.8
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 3.4e-61 239.2 249 60.6
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 1.3e-60 237.3 263 52.9
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.7e-60 236.9 251 56.2
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.2e-60 236.5 264 54.9
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 2.2e-60 236.5 252 56.3
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 2.9e-60 236.1 249 61.0
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 6.4e-60 235.0 252 57.1
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 8.4e-60 234.6 258 62.0
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 1.1e-59 234.2 256 58.2
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 3.2e-59 232.6 266 55.6
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 3.2e-59 232.6 257 60.3
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 3.2e-59 232.6 254 58.3
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 7.1e-59 231.5 250 58.8
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 7.1e-59 231.5 250 58.4
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 7.1e-59 231.5 251 60.2
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 9.2e-59 231.1 252 57.5
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 1.2e-58 230.7 252 60.7
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.2e-58 230.7 209 62.7
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.6e-58 230.3 272 53.7
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.6e-58 230.3 272 53.7
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 2.1e-58 229.9 253 59.3
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 2.1e-58 229.9 249 56.6
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 2.7e-58 229.6 273 53.1
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 3.5e-58 229.2 260 52.7
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 6.0e-58 228.4 255 58.4
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.3e-57 227.3 251 60.6
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 3.9e-57 225.7 253 55.7
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 3.9e-57 225.7 251 55.4
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 5.1e-57 225.3 206 63.1
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 8.7e-57 224.6 254 61.4
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 8.7e-57 224.6 299 53.2
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 1.1e-56 224.2 273 52.4
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.1e-56 224.2 251 55.0
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.5e-56 223.8 202 62.4
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 2.5e-56 223.0 251 53.0
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.6e-55 220.3 254 52.8
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 2.1e-55 219.9 257 55.6
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 4.7e-55 218.8 252 55.6
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 6.2e-55 218.4 249 57.0
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.1e-54 217.6 252 56.3
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 1.8e-54 216.9 254 58.7
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 2.4e-54 216.5 183 63.9
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 3.1e-54 216.1 248 58.5
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 3.1e-54 216.1 252 56.0
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 4.4e-53 212.2 251 50.6
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 9.9e-53 211.1 251 51.0
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 2.2e-52 209.9 276 54.7
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 6.4e-52 208.4 261 54.0
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 8.4e-52 208.0 260 51.9
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.1e-51 207.6 251 51.0
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 1.9e-51 206.8 248 49.6
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 1.9e-51 206.8 251 55.0
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 3.2e-51 206.1 252 51.2
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 1.2e-50 204.1 251 50.2
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 1.2e-50 204.1 254 49.6
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 2.7e-50 203.0 248 51.2
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 4.6e-50 202.2 248 48.8
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.0e-49 201.1 251 51.8
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.3e-49 199.9 253 51.0
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 3.9e-49 199.1 251 51.4
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 3.9e-49 199.1 251 51.0
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 5.1e-49 198.7 251 51.0
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 6.6e-49 198.4 224 51.3
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 4.3e-48 195.7 215 56.3
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 3.6e-47 192.6 261 48.7
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 5.3e-46 188.7 228 49.1
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 5.3e-46 188.7 228 49.1
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 5.3e-46 188.7 136 72.1
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 2.0e-45 186.8 226 48.2
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 9.9e-45 184.5 228 49.1
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-44 184.1 228 49.1
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 2.9e-44 183.0 228 48.7
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 3.8e-44 182.6 263 47.5
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 6.4e-44 181.8 265 44.5
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 3.2e-43 179.5 227 48.9
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.2e-43 179.1 138 68.1
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.2e-43 179.1 138 68.1
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 9.3e-43 177.9 248 46.0
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 1.6e-42 177.2 135 67.4
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.1e-42 176.8 248 50.4
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 2.1e-42 176.8 282 48.2
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 2.7e-42 176.4 261 50.6
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.3e-41 174.1 248 50.0
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 1.3e-41 174.1 192 54.7
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.5e-40 170.6 135 69.6
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 1.6e-39 167.2 225 42.7
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 2.4e-38 163.3 177 56.5
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 2.2e-36 156.8 267 41.9
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 1.4e-35 154.1 253 42.3
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 3.2e-35 152.9 262 48.1
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 7.1e-35 151.8 121 65.3
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 1.3e-33 147.5 254 44.1
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 2.8e-31 139.8 193 49.2
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 3.4e-29 132.9 139 56.1
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 1.3e-23 114.4 179 48.6
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.8e-23 113.2 159 52.8
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 3.1e-22 109.8 74 70.3
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 1.9e-19 100.5 75 72.0
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 2.5e-19 100.1 177 41.2
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 1.4e-17 94.4 178 41.0
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 5.1e-17 92.4 119 47.1
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 2.2e-15 87.0 219 34.7
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 7.7e-13 78.6 135 45.2
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 6.1e-10 68.9 132 44.7
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 9.7e-08 61.6 100 38.0
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 2.8e-07 60.1 58 58.6
A10p06060 Brassica napus HOM05D005104 ORTHO05D006614 4.1e-06 56.2 82 41.5


User provided reference genes

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