Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 1.4e-298 1028.9 517 100.0
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 2.2e-78 297.4 475 44.0
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 3.9e-67 260.0 538 36.4
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 9.9e-55 218.8 430 37.7
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 8.2e-33 146.0 519 29.1
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 2.6e-31 141.0 322 33.5
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 2.9e-30 137.5 238 37.0
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 7.1e-29 132.9 307 34.5
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 2.7e-28 131.0 281 35.9
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 3.5e-28 130.6 260 35.8
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 1.0e-27 129.0 342 30.4
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 1.0e-27 129.0 460 29.8
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 2.3e-27 127.9 272 33.8
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 3.0e-27 127.5 314 33.8
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 1.1e-26 125.6 214 38.3
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 1.3e-25 122.1 288 32.3
Oeu012723.3 Olea europaea HOM05D007736 ORTHO05D009783 1.4e-24 118.6 383 27.9
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 6.9e-24 116.3 477 26.6
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 1.0e-22 112.5 255 35.3
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 1.7e-22 111.7 248 33.9
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 2.2e-22 111.3 252 35.7
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 2.9e-22 110.9 220 37.3
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 6.5e-22 109.8 242 34.7
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 1.1e-21 109.0 334 31.1
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 7.2e-21 106.3 276 31.5
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 9.4e-21 105.9 497 26.0
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 3.6e-20 104.0 222 35.6
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 4.6e-20 103.6 260 32.3
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 6.1e-20 103.2 236 33.1
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 7.9e-20 102.8 254 34.3
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 1.0e-19 102.4 202 36.1
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 2.3e-19 101.3 254 31.5
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 3.9e-19 100.5 222 34.7
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 1.5e-18 98.6 236 31.4
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 1.5e-18 98.6 365 28.8
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 2.0e-18 98.2 253 33.2
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 2.0e-18 98.2 239 33.9
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 2.5e-18 97.8 213 31.5
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 2.5e-18 97.8 258 32.6
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 3.3e-18 97.4 329 29.2
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 7.4e-18 96.3 226 34.1
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 7.4e-18 96.3 253 32.4
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 7.4e-18 96.3 240 34.2
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 9.7e-18 95.9 227 31.3
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 1.3e-17 95.5 229 31.0
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 2.8e-17 94.4 253 32.8
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 3.7e-17 94.0 239 30.5
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 4.8e-17 93.6 232 33.2
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 1.1e-16 92.4 206 29.6
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 2.6e-15 87.8 208 28.8
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 3.4e-15 87.4 259 29.0
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 3.4e-15 87.4 238 29.8
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 5.9e-15 86.7 249 31.7
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 1.0e-14 85.9 259 28.6
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 1.7e-14 85.1 131 34.4
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 2.9e-14 84.3 162 34.6
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 3.8e-14 84.0 232 27.6
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 5.0e-14 83.6 412 24.5
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 8.5e-14 82.8 366 24.3
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 3.2e-13 80.9 218 31.7
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 4.2e-13 80.5 198 28.8
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 5.5e-13 80.1 132 36.4
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 7.2e-13 79.7 108 34.3
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 1.2e-12 79.0 288 26.0
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 4.7e-12 77.0 180 30.6
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 1.0e-11 75.9 133 33.1
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 1.4e-11 75.5 134 32.1
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.3e-11 74.7 135 35.6
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 3.0e-11 74.3 161 33.5
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 3.9e-11 73.9 132 29.5
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 6.7e-11 73.2 204 28.4
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 6.7e-11 73.2 137 34.3
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 6.7e-11 73.2 135 32.6
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 6.7e-11 73.2 117 35.9
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.0e-10 71.6 161 32.3
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 2.6e-10 71.2 235 27.2
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.6e-10 71.2 174 31.0
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 3.3e-10 70.9 164 29.9
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 7.4e-10 69.7 126 36.5
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 1.3e-09 68.9 123 37.4
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.8e-09 67.8 174 30.5
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 2.8e-09 67.8 133 31.6
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 4.8e-09 67.0 142 29.6
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 6.3e-09 66.6 218 29.8
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 2.4e-08 64.7 341 24.9
Peaxi162Scf01290g00019 Petunia axillaris HOM05D007736 ORTHO05D009783 2.2e-06 58.2 179 32.4


User provided reference genes

Program Settings