Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17252 Striga asiatica HOM05D007945 ORTHO05D010049 7.6e-81 303.9 167 100.0
Rhsim08G0014600 Rhododendron simsii HOM05D007945 ORTHO05D010049 1.7e-19 100.1 132 45.5
Migut.K00772 Erythranthe guttata HOM05D007945 ORTHO05D010049 3.7e-19 99.0 188 43.1
Oeu053574.1 Olea europaea HOM05D007945 ORTHO05D010049 2.4e-18 96.3 88 60.2
Ciclev10027143m.g Citrus clementina HOM05D007945 ORTHO05D010049 4.1e-18 95.5 132 47.0
Actinidia30841 Actinidia chinensis HOM05D007945 ORTHO05D010049 1.6e-17 93.6 93 59.1
Atru.chr3.1299 Acer truncatum HOM05D007945 ORTHO05D010049 2.6e-17 92.8 167 41.9
Dinv20782 Davidia involucrata HOM05D007945 ORTHO05D010049 4.5e-17 92.0 141 44.7
QL06p047569 Quercus lobata HOM05D007945 ORTHO05D010049 4.5e-17 92.0 163 39.3
Hma1.2p1_0045F.1_g026430 Hydrangea macrophylla HOM05D007945 ORTHO05D010049 1.0e-16 90.9 128 48.4
Cc07_g14340 Coffea canephora HOM05D007945 ORTHO05D010049 1.7e-16 90.1 131 48.9
MD15G1315600 Malus domestica HOM05D007945 ORTHO05D010049 2.9e-16 89.4 137 42.3
COL.COLO4_27337 Corchorus olitorius HOM05D007945 ORTHO05D010049 5.0e-16 88.6 137 46.7
Lj4C272T2 Lonicera japonica HOM05D007945 ORTHO05D010049 6.5e-16 88.2 149 41.6
MBI02_g18288_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D002064 1.5e-15 87.0 158 41.1
Lalb_Chr16g0381801 Lupinus albus HOM05D007945 ORTHO05D010049 1.9e-15 86.7 122 41.8
Aqoxy5G01332 Aquilegia oxysepala HOM05D007945 ORTHO05D010049 2.5e-15 86.3 128 43.8
EL10Ac6g14794 Beta vulgaris HOM05D007945 ORTHO05D010049 2.1e-14 83.2 134 44.0
Nitab4.5_0001122g0120 Nicotiana tabacum HOM05D007945 ORTHO05D010049 2.1e-14 83.2 131 45.0
Solyc04g013200.1 Solanum lycopersicum HOM05D007945 ORTHO05D010049 2.1e-14 83.2 156 42.3
Gorai.007G233700 Gossypium raimondii HOM05D007945 ORTHO05D010049 4.7e-14 82.0 140 42.1
Nitab4.5_0000902g0130 Nicotiana tabacum HOM05D007945 ORTHO05D010049 4.7e-14 82.0 126 43.7
PGSC0003DMG400023581 Solanum tuberosum HOM05D007945 ORTHO05D010049 4.7e-14 82.0 129 45.0
Cfa004358 Carpinus fangiana HOM05D007945 ORTHO05D010049 6.1e-14 81.6 128 45.3
Manes.13G098400 Manihot esculenta HOM05D007945 ORTHO05D010049 6.1e-14 81.6 127 44.9
RcHm_v2.0_Chr2g0111971 Rosa chinensis HOM05D007945 ORTHO05D010049 1.8e-13 80.1 129 44.2
Haze_15050 Corylus avellana HOM05D007945 ORTHO05D010049 2.3e-13 79.7 130 43.8
Gohir.D11G217700 Gossypium hirsutum HOM05D007945 ORTHO05D010049 3.0e-13 79.3 140 41.4
TAR376G1002 Trochodendron aralioides HOM05D007945 ORTHO05D010049 6.7e-13 78.2 130 40.8
CANSAT01G1602 Cannabis sativa HOM05D007945 ORTHO05D010049 8.8e-13 77.8 128 42.2
Peaxi162Scf00569g00003 Petunia axillaris HOM05D007945 ORTHO05D010049 8.8e-13 77.8 129 41.9
Glyma.02G040200 Glycine max HOM05D007945 ORTHO05D010049 1.2e-12 77.4 126 38.9
VMungo1215G0385 Vigna mungo HOM05D007945 ORTHO05D010049 1.2e-12 77.4 126 40.5
FvH4_1g20030 Fragaria vesca HOM05D007945 ORTHO05D010049 1.5e-12 77.0 130 43.8
FAN19G2492 Fragaria x ananassa HOM05D007945 ORTHO05D010049 2.6e-12 76.3 130 43.8
FAN28G1827 Fragaria x ananassa HOM05D007945 ORTHO05D010049 2.6e-12 76.3 129 44.2
AT1G26290 Arabidopsis thaliana HOM05D007945 ORTHO05D010049 4.4e-12 75.5 88 50.0
Nn1g05498 Nelumbo nucifera HOM05D007945 ORTHO05D010049 4.4e-12 75.5 125 41.6
PGR102G2218 Punica granatum HOM05D007945 ORTHO05D010049 4.4e-12 75.5 128 43.0
Sopen04g006380 Solanum pennellii HOM05D007945 ORTHO05D010049 5.7e-12 75.1 159 39.6
Thecc.01G092700 Theobroma cacao HOM05D007945 ORTHO05D010049 7.5e-12 74.7 133 40.6
FAN26G0842 Fragaria x ananassa HOM05D007945 ORTHO05D010049 9.7e-12 74.3 130 43.1
THA.LOC104807860 Tarenaya hassleriana HOM05D007945 ORTHO05D010049 2.2e-11 73.2 88 50.0
ECA232G3960 Erigeron canadensis HOM05D007945 ORTHO05D010049 3.7e-11 72.4 168 36.9
AL7G12470 Arabidopsis lyrata HOM05D007945 ORTHO05D010049 4.8e-11 72.0 88 47.7
HanXRQChr09g0259601 Helianthus annuus HOM05D007945 ORTHO05D010049 4.8e-11 72.0 123 38.2
Glyma.01G024900 Glycine max HOM05D007945 ORTHO05D010049 6.3e-11 71.6 126 38.1
Phvul.002G148800 Phaseolus vulgaris HOM05D007945 ORTHO05D010049 6.3e-11 71.6 126 38.1
TAR628G0666 Trochodendron aralioides HOM05D007577 ORTHO05D002366 6.3e-11 71.6 101 49.5
BcaC01g00344 Brassica carinata HOM05D007945 ORTHO05D010049 1.1e-10 70.9 88 46.6
A08p23120 Brassica napus HOM05D007945 ORTHO05D010049 1.1e-10 70.9 88 46.6
BolC3t20117H Brassica oleracea HOM05D007945 ORTHO05D010049 1.1e-10 70.9 88 46.6
BraA08t34270Z Brassica rapa HOM05D007945 ORTHO05D010049 1.1e-10 70.9 88 46.6
Thhalv10026515m.g Eutrema salsugineum HOM05D007945 ORTHO05D010049 1.1e-10 70.9 88 46.6
Sp7g35750 Schrenkiella parvula HOM05D007945 ORTHO05D010049 1.4e-10 70.5 88 46.6
CARHR246510 Cardamine hirsuta HOM05D007945 ORTHO05D010049 2.4e-10 69.7 88 46.6
SalBow5G3321 Salvia bowleyana HOM05D007945 ORTHO05D010049 2.4e-10 69.7 134 45.5
BcaB03g12302 Brassica carinata HOM05D007945 ORTHO05D010049 3.1e-10 69.3 88 45.5
C03p78720 Brassica napus HOM05D007945 ORTHO05D010049 3.1e-10 69.3 88 45.5
Carub.0007s0210 Capsella rubella HOM05D007945 ORTHO05D010049 3.1e-10 69.3 88 45.5
Prupe.6G196100 Prunus persica HOM05D007945 ORTHO05D010049 4.1e-10 68.9 131 40.5
Sc03g0000270 Simmondsia chinensis HOM05D007945 ORTHO05D010049 7.0e-10 68.2 146 35.6
MELO3C007726.2 Cucumis melo HOM05D007945 ORTHO05D010049 9.1e-10 67.8 118 40.7
TPR.G29980 Trifolium pratense HOM05D007945 ORTHO05D010049 9.1e-10 67.8 137 36.5
Lj2g0025684 Lotus japonicus HOM05D007945 ORTHO05D010049 1.2e-09 67.4 88 46.6
DCAR_003454 Daucus carota HOM05D007945 ORTHO05D010049 4.5e-09 65.5 149 35.6
CiPaw.02G021700 Carya illinoinensis HOM05D007945 ORTHO05D010049 5.9e-09 65.1 129 38.0
Cpa.g.sc55.53 Carica papaya HOM05D007945 ORTHO05D010049 7.7e-09 64.7 130 35.4
ATR0022G034 Amborella trichopoda HOM05D007945 ORTHO05D010049 2.2e-08 63.2 141 34.0
Ca_04542_v3 Cicer arietinum L. HOM05D007945 ORTHO05D010049 3.8e-08 62.4 161 31.1
Sed0020490 Sechium edule HOM05D007945 ORTHO05D010049 8.5e-08 61.2 126 39.7
Psat2g081080 Pisum sativum HOM05D007945 ORTHO05D010049 1.5e-07 60.5 171 33.9
ClCG01G018480 Citrullus lanatus HOM05D007945 ORTHO05D010049 4.2e-07 58.9 158 36.1
CiPaw.01G047400 Carya illinoinensis HOM05D007945 ORTHO05D010049 5.5e-07 58.5 126 37.3
arahy.Tifrunner.gnm1.ann1.A6KDPG Arachis hypogaea HOM05D007945 ORTHO05D010049 7.2e-07 58.2 170 31.2
arahy.Tifrunner.gnm1.ann1.N1XH1Z Arachis hypogaea HOM05D007945 ORTHO05D010049 7.2e-07 58.2 170 31.2
CsaV3_6G045130 Cucumis sativus L. HOM05D007945 ORTHO05D010049 2.7e-06 56.2 123 36.6
Medtr5g032580 Medicago truncatula HOM05D007945 ORTHO05D010049 2.7e-06 56.2 161 32.3


User provided reference genes

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