Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17213 Striga asiatica HOM05D013892 ORTHO05D402817 4.4e-264 914.1 456 100.0
SGA_v2.0_scaffold45G17214 Striga asiatica HOM05D013892 ORTHO05D401501 2.4e-60 237.3 206 65.5
SGA_v2.0_scaffold45G17203 Striga asiatica HOM05D013892 ORTHO05D401942 6.7e-39 166.0 207 50.7
SGA_v2.0_scaffold45G17195 Striga asiatica HOM05D005365 ORTHO05D006910 1.3e-29 135.2 223 42.6
SGA_v2.0_scaffold24G10279 Striga asiatica HOM05D000001 ORTHO05D004533 1.7e-10 71.6 46 67.4
SGA_v2.0_scaffold45G17119 Striga asiatica HOM05D013892 ORTHO05D403040 1.7e-10 71.6 97 45.4
SGA_v2.0_scaffold45G17198 Striga asiatica HOM05D013892 ORTHO05D403700 2.3e-10 71.2 101 45.5
SGA_v2.0_scaffold18G08469 Striga asiatica HOM05D001784 ORTHO05D001699 3.6e-08 63.9 79 50.6
Sp5g12620 Schrenkiella parvula HOM05D001784 ORTHO05D001699 1.0e-07 62.4 93 40.9
SGA_v2.0_scaffold165G38183 Striga asiatica HOM05D001784 ORTHO05D001699 1.8e-07 61.6 70 55.7
Migut.J01342 Erythranthe guttata HOM05D001784 ORTHO05D001699 2.3e-07 61.2 74 51.4
Migut.J01343 Erythranthe guttata HOM05D001784 ORTHO05D001699 2.3e-07 61.2 74 51.4
SGA_v2.0_scaffold44G16848 Striga asiatica HOM05D001784 ORTHO05D001699 4.0e-07 60.5 70 54.3
MD05G1188200 Malus domestica HOM05D001784 ORTHO05D001699 5.2e-07 60.1 84 47.6
CAN.G39.10 Capsicum annuum HOM05D001784 ORTHO05D001699 8.9e-07 59.3 90 48.9
Migut.F00148 Erythranthe guttata HOM05D001784 ORTHO05D001699 8.9e-07 59.3 70 52.9
Migut.F00149 Erythranthe guttata HOM05D001784 ORTHO05D001699 8.9e-07 59.3 70 52.9
unitig_60.g25634 Utricularia gibba HOM05D001784 ORTHO05D001699 8.9e-07 59.3 70 52.9
SGA_v2.0_scaffold68G22850 Striga asiatica HOM05D047367 ORTHO05D404194 1.2e-06 58.9 167 29.3
unitig_62.g23857 Utricularia gibba HOM05D001784 ORTHO05D001699 1.2e-06 58.9 70 54.3
CiPaw.02G048100 Carya illinoinensis HOM05D001784 ORTHO05D001699 1.5e-06 58.5 83 53.0
ClCG06G009610 Citrullus lanatus HOM05D001784 ORTHO05D001699 1.5e-06 58.5 53 66.0
SalBow2G2430 Salvia bowleyana HOM05D001784 ORTHO05D001699 1.5e-06 58.5 70 52.9
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.5e-06 58.5 70 52.9
SalBow8G2153 Salvia bowleyana HOM05D001784 ORTHO05D001699 1.5e-06 58.5 70 52.9
SGA_v2.0_scaffold45G17207 Striga asiatica HOM05D001657 ORTHO05D001557 1.5e-06 58.5 87 48.3
MSTRG.26974 Avicennia marina HOM05D001784 ORTHO05D001699 2.0e-06 58.2 71 52.1
AT5G24510 Arabidopsis thaliana HOM05D001784 ORTHO05D001699 3.4e-06 57.4 91 41.8
MSTRG.26982 Avicennia marina HOM05D001784 ORTHO05D001699 3.4e-06 57.4 83 50.6
Cc06_g13350 Coffea canephora HOM05D001784 ORTHO05D001699 3.4e-06 57.4 71 52.1
HanXRQChr09g0250721 Helianthus annuus HOM05D001784 ORTHO05D001699 3.4e-06 57.4 70 51.4
HanXRQChr10g0305311 Helianthus annuus HOM05D001784 ORTHO05D001699 4.4e-06 57.0 70 50.0
MD07G1159200 Malus domestica HOM05D001784 ORTHO05D001699 4.4e-06 57.0 70 52.9
unitig_0.g319 Utricularia gibba HOM05D000482 ORTHO05D001699 4.4e-06 57.0 70 52.9
unitig_64.g29778 Utricularia gibba HOM05D001784 ORTHO05D001699 4.4e-06 57.0 68 54.4
Sopen02g002360 Solanum pennellii HOM05D001784 ORTHO05D001699 5.7e-06 56.6 73 47.9
Prupe.2G197300 Prunus persica HOM05D001784 ORTHO05D001699 7.5e-06 56.2 70 52.9
PSO443G0031 Papaver somniferum HOM05D001784 ORTHO05D001699 9.8e-06 55.8 72 54.2
PSO443G0043 Papaver somniferum HOM05D001784 ORTHO05D001699 9.8e-06 55.8 72 54.2
PSO443G0076 Papaver somniferum HOM05D001784 ORTHO05D001699 9.8e-06 55.8 72 54.2


User provided reference genes

Program Settings