Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17196 Striga asiatica HOM05D005365 ORTHO05D006910 9.7e-53 209.9 109 100.0
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 5.0e-41 171.0 108 77.8
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 1.5e-40 169.5 144 67.4
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 2.5e-40 168.7 108 79.6
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 7.2e-40 167.2 108 77.8
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 3.6e-39 164.9 105 77.1
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 4.7e-39 164.5 105 76.2
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 4.7e-39 164.5 108 75.9
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 8.0e-39 163.7 108 76.9
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 8.0e-39 163.7 108 75.9
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 1.0e-38 163.3 108 74.1
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.8e-38 162.5 108 74.1
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.8e-38 162.5 108 74.1
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 2.3e-38 162.2 105 78.1
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 2.3e-38 162.2 108 75.9
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 3.0e-38 161.8 108 75.9
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 3.0e-38 161.8 108 75.0
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 4.0e-38 161.4 106 74.5
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 4.0e-38 161.4 108 75.0
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 4.0e-38 161.4 108 74.1
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 5.2e-38 161.0 108 75.0
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 6.7e-38 160.6 108 74.1
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 6.7e-38 160.6 108 74.1
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 6.7e-38 160.6 108 74.1
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 8.8e-38 160.2 108 75.0
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 1.2e-37 159.8 108 72.2
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 1.5e-37 159.5 105 76.2
Rhsim10G0178300 Rhododendron simsii HOM05D005365 ORTHO05D006910 1.5e-37 159.5 108 75.0
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 2.0e-37 159.1 108 75.0
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 2.0e-37 159.1 108 73.1
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 2.6e-37 158.7 108 73.1
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 2.6e-37 158.7 108 73.1
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 2.6e-37 158.7 108 75.0
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 3.3e-37 158.3 105 75.2
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 3.3e-37 158.3 108 73.1
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 4.4e-37 157.9 106 72.6
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 4.4e-37 157.9 108 72.2
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 4.4e-37 157.9 105 73.3
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 4.4e-37 157.9 108 72.2
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 5.7e-37 157.5 108 75.0
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 5.7e-37 157.5 105 75.2
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 5.7e-37 157.5 108 72.2
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 7.5e-37 157.1 108 72.2
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 7.5e-37 157.1 108 72.2
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 9.7e-37 156.8 108 75.0
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 9.7e-37 156.8 108 72.2
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 9.7e-37 156.8 105 73.3
MBI19_g43231_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 9.7e-37 156.8 105 73.3
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 1.3e-36 156.4 108 73.1
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 1.3e-36 156.4 108 74.1
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 1.7e-36 156.0 108 71.3
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 1.7e-36 156.0 105 76.2
TPR.G24911 Trifolium pratense HOM05D005365 ORTHO05D006910 2.8e-36 155.2 104 74.0
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 3.7e-36 154.8 108 72.2
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 4.8e-36 154.5 108 71.3
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 4.8e-36 154.5 108 71.3
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 4.8e-36 154.5 108 71.3
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 6.3e-36 154.1 108 72.2
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 1.8e-35 152.5 107 72.9
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 1.8e-35 152.5 104 74.0
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 1.8e-35 152.5 105 72.4
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 2.4e-35 152.1 108 69.4
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 2.4e-35 152.1 108 72.2
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 2.4e-35 152.1 108 71.3
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 3.1e-35 151.8 108 69.4
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 4.1e-35 151.4 104 74.0
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 4.1e-35 151.4 105 70.5
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 5.3e-35 151.0 108 70.4
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 5.3e-35 151.0 108 70.4
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 5.3e-35 151.0 105 70.5
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 7.0e-35 150.6 105 73.3
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 9.1e-35 150.2 108 71.3
GSVIVG01038362001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.2e-34 149.8 108 70.4
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.6e-34 149.4 108 70.4
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 1.6e-34 149.4 108 68.5
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 1.6e-34 149.4 108 69.4
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 2.0e-34 149.1 108 69.4
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 2.7e-34 148.7 104 72.1
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 3.5e-34 148.3 104 72.1
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 4.5e-34 147.9 105 70.5
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 4.5e-34 147.9 104 73.1
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 4.5e-34 147.9 104 73.1
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 4.5e-34 147.9 104 73.1
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 5.9e-34 147.5 105 71.4
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 7.7e-34 147.1 104 72.1
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 7.7e-34 147.1 104 73.1
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 7.7e-34 147.1 104 73.1
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 7.7e-34 147.1 105 71.4
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 1.0e-33 146.7 105 67.6
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 1.0e-33 146.7 105 71.4
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 2.2e-33 145.6 105 70.5
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 2.2e-33 145.6 105 68.6
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 2.2e-33 145.6 105 70.5
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 5.0e-33 144.4 104 71.2
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 5.0e-33 144.4 104 71.2
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 6.5e-33 144.1 105 71.4
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 6.5e-33 144.1 108 68.5
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 1.5e-32 142.9 104 71.2
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 2.5e-32 142.1 108 67.6
SEGI_18021 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 3.2e-32 141.7 105 70.5
CDE05G3412 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 9.4e-32 140.2 105 65.7
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 2.7e-31 138.7 108 63.9
HPP92_006138 Vanilla planifolia HOM05D005365 ORTHO05D006910 5.2e-30 134.4 104 64.4
GSVIVG01030692001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.3e-28 129.8 104 66.3
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 1.4e-27 126.3 105 61.0
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 4.0e-22 108.2 108 48.1
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 5.2e-22 107.8 105 50.5
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 4.1e-19 98.2 105 47.6
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 9.2e-19 97.1 61 73.8
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 4.5e-18 94.7 108 45.4
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 2.3e-17 92.4 105 47.6
PRCOL_00005851 Prasinoderma coloniale HOM05D005365 ORTHO05D006910 1.5e-13 79.7 106 38.7
Oeu012494.1 Olea europaea HOM05D005365 ORTHO05D006910 5.4e-11 71.2 50 74.0
MCO13G329 Micromonas commoda HOM05D005365 ORTHO05D006910 7.8e-10 67.4 106 38.7


User provided reference genes

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