Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 0.0e+00 1420.2 731 100.0
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 7.0e-163 578.6 742 50.5
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 2.0e-149 533.9 736 46.5
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 5.7e-133 479.2 710 43.4
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 7.5e-133 478.8 786 41.5
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.1e-131 474.9 728 42.3
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 1.7e-129 467.6 734 42.0
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 5.2e-126 456.1 740 42.0
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 8.9e-126 455.3 330 70.0
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 1.4e-123 448.0 601 44.4
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 6.0e-122 442.6 567 46.2
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 1.3e-121 441.4 757 41.3
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 1.3e-121 441.4 365 62.5
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 2.5e-120 437.2 759 40.3
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 4.3e-120 436.4 372 61.3
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.6e-119 433.3 348 63.8
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 3.6e-119 433.3 709 41.2
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 6.2e-119 432.6 468 53.2
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 8.1e-119 432.2 436 53.0
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 8.9e-118 428.7 671 43.2
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.5e-117 427.9 400 56.5
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 2.6e-117 427.2 345 63.8
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 7.5e-117 425.6 725 41.8
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 8.3e-116 422.2 390 57.9
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 3.2e-115 420.2 381 56.4
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.2e-115 420.2 390 57.7
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.7e-113 414.5 418 52.4
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.7e-113 414.5 626 43.1
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 3.0e-113 413.7 415 55.9
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 5.1e-113 412.9 406 54.9
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 6.6e-113 412.5 385 58.2
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 6.6e-113 412.5 360 58.6
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 8.6e-113 412.1 602 42.7
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 7.3e-112 409.1 372 56.5
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 7.3e-112 409.1 478 48.1
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.6e-111 407.9 397 55.9
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.1e-111 407.5 382 56.8
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.6e-111 406.8 382 56.8
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 4.7e-111 406.4 571 45.2
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 4.7e-111 406.4 397 53.7
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 6.2e-111 406.0 478 47.9
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 6.2e-111 406.0 396 56.3
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.1e-110 405.2 382 56.5
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 8.9e-110 402.1 444 52.3
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 1.2e-109 401.7 481 48.6
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 2.6e-109 400.6 376 58.0
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 5.8e-109 399.4 468 49.4
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 1.3e-108 398.3 721 39.3
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 2.2e-108 397.5 413 53.0
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 3.2e-107 393.7 377 55.4
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 9.2e-107 392.1 569 43.2
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.6e-106 391.3 403 53.8
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 1.3e-105 388.3 587 42.8
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 1.7e-105 387.9 399 52.1
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.7e-105 387.9 647 39.6
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 6.6e-105 386.0 388 54.6
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.9e-104 384.4 598 42.0
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.2e-103 381.7 427 50.1
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 8.1e-103 379.0 347 57.1
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.4e-102 378.3 465 47.5
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.4e-102 377.5 331 58.9
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.5e-101 374.8 496 46.8
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.3e-100 371.7 335 58.5
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 3.2e-99 367.1 400 53.5
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 4.2e-99 366.7 415 49.4
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 1.2e-98 365.2 461 47.7
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 2.7e-98 364.0 643 39.2
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 6.0e-98 362.8 591 42.3
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 6.0e-98 362.8 322 58.7
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 7.8e-98 362.5 344 57.3
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 1.9e-96 357.8 618 41.3
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 7.3e-96 355.9 598 40.1
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 4.8e-95 353.2 600 40.3
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 3.0e-89 334.0 614 38.3
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.0e-89 334.0 270 63.0
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 3.0e-89 334.0 270 63.0
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 1.1e-88 332.0 432 46.8
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 1.9e-88 331.3 617 38.4
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 9.6e-88 328.9 471 43.3
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 6.2e-87 326.2 339 54.0
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 5.3e-86 323.2 469 42.2
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 9.0e-86 322.4 313 53.7
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 4.5e-85 320.1 312 56.4
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.4e-83 314.3 282 56.7
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 9.3e-83 312.4 203 72.4
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.0e-81 308.9 314 54.8
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 8.7e-81 305.8 197 73.1
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 9.6e-80 302.4 507 41.4
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 3.7e-79 300.4 235 62.1
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.2e-77 295.4 322 47.8
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 4.9e-76 290.0 288 54.9
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 9.7e-72 275.8 517 39.3
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 5.7e-64 250.0 201 65.2
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.3e-60 238.8 409 37.2
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.6e-58 231.9 285 44.6
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.8e-54 218.4 248 50.0
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 5.9e-53 213.4 387 39.8
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 5.9e-53 213.4 299 42.8
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 8.5e-52 209.5 261 40.6
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 5.2e-49 200.3 114 78.1
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 6.7e-49 199.9 115 78.3
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 1.8e-46 191.8 176 49.4
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 6.7e-41 173.3 243 42.0
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 9.4e-35 152.9 590 26.9
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.4e-33 149.1 190 50.0
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.8e-33 148.7 176 51.7
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 5.4e-30 137.1 194 46.9
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 9.5e-27 126.3 239 36.0
Oeu032321.1 Olea europaea HOM05D006714 ORTHO05D008103 4.9e-15 87.4 234 36.3


User provided reference genes

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