Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 0.0e+00 1537.7 753 100.0
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 2.4e-235 819.3 538 78.3
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 3.4e-221 772.3 495 79.4
SGA_v2.0_scaffold365G50016 Striga asiatica HOM05D011572 ORTHO05D006517 2.4e-166 590.1 376 78.2
SGA_v2.0_scaffold12G06313 Striga asiatica HOM05D011572 ORTHO05D006517 2.2e-148 530.4 382 71.2
SGA_v2.0_scaffold41G15869 Striga asiatica HOM05D011572 ORTHO05D006517 7.2e-147 525.4 311 81.7
SGA_v2.0_scaffold954G53748 Striga asiatica HOM05D011572 ORTHO05D010459 6.1e-130 469.2 235 99.6
SGA_v2.0_scaffold125G33657 Striga asiatica HOM05D011572 ORTHO05D010459 2.1e-106 391.0 214 90.7
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 6.9e-65 253.1 443 39.7
SGA_v2.0_scaffold2719G54189 Striga asiatica HOM05D011572 ORTHO05D010459 6.9e-65 253.1 123 99.2
SGA_v2.0_scaffold365G50015 Striga asiatica HOM05D011572 ORTHO05D012893 3.8e-63 247.3 163 76.1
SGA_v2.0_scaffold9G04869 Striga asiatica HOM05D011572 ORTHO05D006517 1.1e-38 166.0 227 44.5
SGA_v2.0_scaffold502G52512 Striga asiatica HOM05D011572 ORTHO05D006517 1.1e-30 139.4 77 83.1
Thecc.02G036800 Theobroma cacao HOM05D008181 ORTHO05D010459 2.2e-18 98.6 304 26.3
SGA_v2.0_scaffold187G40267 Striga asiatica HOM05D011572 ORTHO05D006517 1.8e-17 95.5 119 41.2
SalBow8G0214 Salvia bowleyana HOM05D031689 ORTHO05D006517 1.2e-16 92.8 430 25.6
SalBow2G0951 Salvia bowleyana HOM05D015320 ORTHO05D006517 2.9e-15 88.2 237 27.4
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 2.9e-15 88.2 270 25.9
SalBow7G0014 Salvia bowleyana HOM05D008082 ORTHO05D006517 6.5e-15 87.0 229 28.4
Thecc.10G054600 Theobroma cacao HOM05D008181 ORTHO05D010459 1.9e-14 85.5 300 25.0
Thecc.05G196700 Theobroma cacao HOM05D008181 ORTHO05D010459 4.2e-14 84.3 257 26.5
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 6.1e-13 80.5 37 86.5
SalBow4G1611 Salvia bowleyana HOM05D009699 ORTHO05D006517 8.0e-13 80.1 254 25.6
SalBow3G1743 Salvia bowleyana HOM05D000011 ORTHO05D006517 1.4e-12 79.3 249 28.1
SalBow8G1146 Salvia bowleyana HOM05D000011 ORTHO05D000018 2.0e-11 75.5 127 34.6
SalBow8G1323 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.4e-11 74.7 227 25.6
SalBow2G3428 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.4e-11 74.3 227 25.6
SalBow2G3580 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.4e-11 74.3 227 25.6
SalBow1G7044 Salvia bowleyana HOM05D009699 ORTHO05D006517 2.2e-10 72.0 265 24.5
SalBow1G3545 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.8e-10 71.6 251 26.3
SalBow1G5862 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.9e-10 70.9 226 26.1
Thecc.01G399000 Theobroma cacao HOM05D008181 ORTHO05D010459 4.9e-10 70.9 256 25.4
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 6.3e-10 70.5 233 26.6
SalBow3G1893 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.8e-09 68.9 226 26.1
SalBow3G2968 Salvia bowleyana HOM05D031689 ORTHO05D006517 7.0e-09 67.0 161 29.8
SalBow4G1541 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.0e-08 65.5 286 25.5
SalBow1G5422 Salvia bowleyana HOM05D010599 ORTHO05D006517 2.7e-08 65.1 216 24.1
SalBow1G6861 Salvia bowleyana HOM05D010599 ORTHO05D006517 4.5e-08 64.3 219 24.7
SalBow2G1190 Salvia bowleyana HOM05D010599 ORTHO05D006517 4.5e-08 64.3 219 24.7
SalBow6G3176 Salvia bowleyana HOM05D010599 ORTHO05D006517 4.5e-08 64.3 215 24.7
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-07 62.0 152 30.9
SalBow1G7517 Salvia bowleyana HOM05D010599 ORTHO05D006517 3.8e-07 61.2 139 28.8
SalBow3G4447 Salvia bowleyana HOM05D010871 ORTHO05D006517 3.8e-07 61.2 223 25.1
SalBow8G4995 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.8e-07 61.2 285 24.9
SGA_v2.0_scaffold74G24697 Striga asiatica HOM05D011572 ORTHO05D006517 3.8e-07 61.2 44 63.6
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 8.6e-07 60.1 218 26.1
Thecc.06G088800 Theobroma cacao HOM05D008181 ORTHO05D010459 8.6e-07 60.1 226 24.3
Thecc.09G272400 Theobroma cacao HOM05D008181 ORTHO05D010459 8.6e-07 60.1 132 31.1
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-06 59.3 152 30.3
SalBow3G1903 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.5e-06 59.3 169 26.6
SalBow6G6558 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.5e-06 59.3 124 29.8
SalBow3G2031 Salvia bowleyana HOM05D011572 ORTHO05D006517 1.9e-06 58.9 167 22.8
SalBow4G1733 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.5e-06 58.5 358 23.5
Thecc.02G178200 Theobroma cacao HOM05D008181 ORTHO05D021025 3.3e-06 58.2 160 25.6
Thecc.02G200300 Theobroma cacao HOM05D008181 ORTHO05D010459 4.3e-06 57.8 224 25.4
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 7.3e-06 57.0 153 29.4


User provided reference genes

Program Settings