Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 5.2e-59 230.7 106 100.0
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 5.4e-48 194.1 106 82.1
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 3.5e-47 191.4 106 78.3
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 4.2e-45 184.5 106 79.2
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 6.8e-43 177.2 106 75.5
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 2.0e-42 175.6 105 74.3
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 3.4e-42 174.9 106 74.5
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 7.5e-42 173.7 106 73.6
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 2.2e-41 172.2 106 72.6
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.4e-40 169.5 106 72.6
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 2.4e-40 168.7 106 69.8
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 3.1e-40 168.3 106 72.6
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 4.1e-40 167.9 106 70.8
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 1.2e-39 166.4 100 73.0
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.6e-39 166.0 95 78.9
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 3.5e-39 164.9 105 70.5
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 4.5e-39 164.5 106 69.8
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 5.9e-39 164.1 104 73.1
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 1.0e-38 163.3 106 67.9
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.7e-38 162.5 104 70.2
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 2.3e-38 162.2 106 67.9
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 8.6e-38 160.2 104 69.2
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.1e-37 159.8 106 69.8
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.1e-37 159.8 105 65.7
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 1.1e-37 159.8 105 66.7
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 1.1e-37 159.8 106 67.9
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.5e-37 159.5 126 61.1
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.5e-37 159.5 105 68.6
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.5e-37 159.5 104 69.2
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 1.9e-37 159.1 109 67.0
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 1.9e-37 159.1 102 69.6
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 7.3e-37 157.1 106 65.1
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 7.3e-37 157.1 104 69.2
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 9.5e-37 156.8 107 67.3
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 9.5e-37 156.8 95 71.6
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 2.1e-36 155.6 103 66.0
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.1e-36 155.6 104 67.3
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.1e-36 155.6 104 67.3
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 3.6e-36 154.8 95 68.4
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 8.0e-36 153.7 94 70.2
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 8.0e-36 153.7 107 65.4
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.0e-35 153.3 107 66.4
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.4e-35 152.9 107 63.6
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 1.4e-35 152.9 96 67.7
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 1.8e-35 152.5 107 66.4
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.8e-35 152.5 107 66.4
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 3.0e-35 151.8 111 62.2
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.2e-35 151.0 105 62.9
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 5.2e-35 151.0 105 62.9
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 6.8e-35 150.6 95 67.4
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 6.8e-35 150.6 109 62.4
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 1.2e-34 149.8 106 61.3
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 1.5e-34 149.4 108 63.0
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 1.5e-34 149.4 107 63.6
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 2.6e-34 148.7 109 60.6
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 3.4e-34 148.3 108 64.8
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 4.4e-34 147.9 105 62.9
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 4.4e-34 147.9 108 64.8
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 4.4e-34 147.9 106 64.2
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 5.7e-34 147.5 103 64.1
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.7e-33 146.0 96 65.6
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.7e-33 144.8 105 61.0
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.7e-33 144.8 105 61.0
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 8.3e-33 143.7 100 62.0
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.1e-32 143.3 103 62.1
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-32 143.3 105 60.0
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.8e-32 142.5 113 60.2
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 3.2e-32 141.7 105 60.0
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 7.0e-32 140.6 97 62.9
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 1.2e-31 139.8 91 69.2
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.6e-31 139.4 95 62.1
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 7.8e-31 137.1 105 58.1
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 1.0e-30 136.7 105 57.1
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.0e-30 136.7 109 57.8
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 1.3e-30 136.3 105 58.1
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.3e-30 136.3 97 61.9
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.9e-30 134.8 105 57.1
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 5.0e-30 134.4 105 56.2
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.1e-29 133.3 105 56.2
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 1.5e-29 132.9 105 55.2
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.5e-29 132.9 104 57.7
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.9e-29 132.5 78 75.6
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 2.5e-29 132.1 105 55.2
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 7.3e-29 130.6 106 56.6
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.1e-28 129.0 122 50.0
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 2.1e-28 129.0 100 55.0
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.8e-28 128.6 76 71.1
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 3.6e-28 128.3 80 67.5
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 3.6e-28 128.3 79 65.8
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 4.7e-28 127.9 122 49.2
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 4.7e-28 127.9 122 49.2
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 4.7e-28 127.9 78 71.8
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 6.2e-28 127.5 76 71.1
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.0e-27 126.7 92 58.7
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.4e-27 126.3 121 50.4
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 1.8e-27 125.9 124 49.2
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.8e-27 125.9 88 61.4
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 3.1e-27 125.2 96 54.2
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 5.2e-27 124.4 90 60.0
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 6.8e-27 124.0 144 45.1
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.5e-26 122.9 127 46.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 2.6e-26 122.1 92 57.6
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 4.4e-26 121.3 77 67.5
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 5.8e-26 120.9 122 46.7
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 1.7e-25 119.4 98 52.0
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.7e-25 119.4 96 58.3
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.2e-25 119.0 96 58.3
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.1e-24 116.7 73 74.0
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.9e-24 115.9 73 69.9
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 3.2e-24 115.2 76 65.8
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 7.0e-24 114.0 78 60.3
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.6e-23 112.8 78 64.1
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 6.0e-23 110.9 78 64.1
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.0e-23 110.9 70 71.4
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 3.9e-22 108.2 70 64.3
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 5.0e-22 107.8 73 67.1
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 1.6e-20 102.8 55 78.2
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 3.1e-19 98.6 67 68.7
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.2e-18 96.7 77 54.5
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 4.4e-18 94.7 122 41.0
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.2e-17 92.4 74 58.1
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 2.1e-15 85.9 102 38.2
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 1.6e-12 76.3 50 70.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 2.1e-12 75.9 44 72.7
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 2.1e-12 75.9 40 82.5
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 2.1e-12 75.9 88 36.4
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 2.6e-10 68.9 40 70.0
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 6.6e-06 54.3 30 73.3
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 8.6e-06 53.9 51 47.1


User provided reference genes

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