Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 7.9e-205 716.8 353 100.0
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 6.6e-143 511.1 296 83.8
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 5.4e-137 491.5 298 80.9
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 1.1e-126 457.2 305 74.4
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 1.1e-126 457.2 284 77.8
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 8.1e-125 451.1 297 72.4
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 3.2e-121 439.1 293 72.7
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 1.6e-120 436.8 293 73.0
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 3.0e-119 432.6 304 68.8
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 1.5e-118 430.3 297 70.4
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 2.5e-118 429.5 305 68.2
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 4.3e-118 428.7 282 70.9
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 9.6e-118 427.6 281 73.0
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 3.6e-117 425.6 282 73.0
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 3.6e-117 425.6 300 68.7
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 4.8e-117 425.2 284 70.8
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 4.8e-117 425.2 284 70.8
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 8.1e-117 424.5 270 73.0
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 1.4e-116 423.7 290 70.3
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 4.0e-116 422.2 303 67.7
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 6.9e-116 421.4 300 67.7
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 1.2e-115 420.6 290 69.3
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 1.5e-115 420.2 301 67.8
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 2.6e-115 419.5 280 71.4
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 4.5e-115 418.7 292 69.2
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 7.6e-115 417.9 282 72.0
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.7e-114 416.8 274 74.1
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 1.7e-114 416.8 282 68.4
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 1.7e-114 416.8 292 70.5
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 3.8e-114 415.6 286 69.2
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 3.8e-114 415.6 290 70.0
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 6.4e-114 414.8 292 68.5
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 2.4e-113 412.9 292 68.2
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 3.2e-113 412.5 280 72.5
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 4.2e-113 412.1 290 69.3
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 7.1e-113 411.4 291 68.7
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 9.3e-113 411.0 297 69.4
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 9.3e-113 411.0 279 70.6
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 1.6e-112 410.2 283 72.4
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 2.7e-112 409.5 284 70.1
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 3.5e-112 409.1 261 74.7
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 3.5e-112 409.1 290 69.0
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 4.6e-112 408.7 295 68.8
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 7.9e-112 407.9 289 69.6
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 1.0e-111 407.5 296 68.2
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 1.3e-111 407.1 266 74.8
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 1.8e-111 406.8 298 67.1
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 2.3e-111 406.4 283 70.0
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 3.9e-111 405.6 262 74.4
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 5.1e-111 405.2 298 68.8
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 1.1e-110 404.1 284 67.6
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 1.5e-110 403.7 264 74.6
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 1.5e-110 403.7 264 74.6
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 1.5e-110 403.7 286 69.9
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 4.3e-110 402.1 285 69.5
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 1.3e-109 400.6 271 72.3
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 1.6e-109 400.2 284 68.0
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 1.6e-109 400.2 294 66.7
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 2.1e-109 399.8 286 69.2
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 2.1e-109 399.8 284 67.6
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 2.8e-109 399.4 293 68.9
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 2.8e-109 399.4 274 70.8
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 3.6e-109 399.1 285 67.0
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 3.6e-109 399.1 282 70.6
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 4.8e-109 398.7 239 77.8
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 6.2e-109 398.3 286 69.2
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 1.4e-108 397.1 298 66.4
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 3.1e-108 396.0 275 72.0
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 3.1e-108 396.0 300 65.3
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 3.1e-108 396.0 292 67.1
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 5.3e-108 395.2 281 69.8
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 1.2e-107 394.0 297 65.7
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 2.2e-106 389.8 286 66.8
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 1.6e-104 383.6 275 66.5
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 2.1e-104 383.3 239 78.2
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 4.3e-102 375.6 282 67.4
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 2.8e-101 372.9 248 75.0
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 2.4e-100 369.8 284 62.3
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 6.9e-100 368.2 273 65.2
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 1.5e-99 367.1 245 74.3
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 3.4e-99 365.9 268 65.3
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 1.7e-98 363.6 271 64.2
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 3.8e-98 362.5 387 49.4
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 3.5e-96 355.9 257 65.0
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 1.8e-95 353.6 289 59.9
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 3.3e-94 349.4 230 73.9
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 5.7e-94 348.6 261 63.2
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 9.6e-94 347.8 289 57.1
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 2.4e-92 343.2 256 63.3
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 2.4e-92 343.2 281 60.1
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 3.1e-92 342.8 268 63.8
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.5e-91 340.5 235 71.5
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 1.7e-90 337.0 274 56.6
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 3.8e-90 335.9 259 58.3
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 1.2e-88 330.9 259 61.0
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 1.2e-88 330.9 272 62.9
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 3.0e-87 326.2 260 60.0
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 3.0e-87 326.2 260 60.0
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 3.0e-87 326.2 260 60.0
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 5.1e-87 325.5 246 64.2
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 1.1e-86 324.3 260 59.2
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 1.1e-86 324.3 260 59.2
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 3.3e-86 322.8 248 60.9
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 7.4e-86 321.6 278 57.6
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 9.7e-86 321.2 266 59.0
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 1.6e-85 320.5 281 56.6
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 5.9e-83 312.0 229 66.8
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 5.9e-83 312.0 277 54.2
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 7.7e-83 311.6 249 59.4
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 6.5e-82 308.5 210 69.5
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 8.5e-82 308.1 249 59.0
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 1.4e-81 307.4 244 61.1
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.0e-79 301.2 212 67.9
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 6.7e-79 298.5 280 52.1
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 2.7e-72 276.6 209 62.2
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 5.2e-71 272.3 249 53.8
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 1.3e-69 267.7 206 61.2
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 3.8e-66 256.1 267 50.6
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 5.7e-62 242.3 164 71.3
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 1.7e-61 240.7 208 62.0
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 8.2e-61 238.4 208 54.3
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 2.4e-60 236.9 260 48.5
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 2.1e-56 223.8 267 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 1.3e-50 204.5 264 41.7
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 7.3e-41 172.2 127 66.1
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 8.9e-39 165.2 283 36.0
Os06g0644800 Oryza sativa ssp. japonica HOM05D005541 ORTHO05D006875 5.4e-36 156.0 128 54.7
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 2.3e-31 140.6 97 74.2
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 1.4e-28 131.3 234 32.1
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 3.7e-21 106.7 95 56.8
Cre06.g257900 Chlamydomonas reinhardtii HOM05D005541 ORTHO05D006875 3.2e-20 103.6 181 35.4
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 7.1e-20 102.4 180 36.1
Ca_24194_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.3e-18 97.4 104 51.9
RcHm_v2.0_Chr1g0314561 Rosa chinensis HOM05D005541 ORTHO05D006875 3.4e-14 83.6 70 55.7
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 1.3e-13 81.6 48 83.3
RcHm_v2.0_Chr5g0069501 Rosa chinensis HOM05D005541 ORTHO05D006875 7.1e-12 75.9 53 64.2
RcHm_v2.0_Chr7g0241391 Rosa chinensis HOM05D005541 ORTHO05D006875 2.3e-10 70.9 43 72.1
FvH4_1g02060 Fragaria vesca HOM05D005541 ORTHO05D006875 2.6e-06 57.4 40 57.5
Cfa024351 Carpinus fangiana HOM05D005541 ORTHO05D124727 3.4e-06 57.0 243 26.3


User provided reference genes

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