Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 5.7e-118 427.6 211 100.0
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 4.4e-70 268.5 195 70.8
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 3.4e-62 242.3 202 61.4
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 4.5e-62 241.9 201 61.7
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 3.2e-60 235.7 206 61.7
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 3.2e-60 235.7 206 61.7
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 7.1e-60 234.6 198 62.6
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 2.7e-59 232.6 198 63.1
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 6.0e-59 231.5 199 58.8
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 6.0e-59 231.5 199 57.8
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 1.8e-58 229.9 206 59.7
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 5.1e-58 228.4 206 59.7
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 2.8e-56 222.6 184 59.2
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 3.7e-56 222.2 195 59.0
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 4.8e-56 221.9 193 62.2
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 8.1e-56 221.1 196 59.2
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 8.1e-56 221.1 189 63.0
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 6.9e-55 218.0 199 57.8
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 1.2e-54 217.2 190 58.4
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 1.2e-54 217.2 193 55.4
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 2.0e-54 216.5 190 60.5
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 3.4e-54 215.7 197 56.9
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 5.8e-54 214.9 203 57.1
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 7.6e-54 214.5 194 54.1
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 7.6e-54 214.5 194 54.1
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 7.6e-54 214.5 197 57.4
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 1.7e-53 213.4 196 59.7
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 2.2e-53 213.0 202 55.0
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 3.8e-53 212.2 192 57.8
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 6.5e-53 211.5 193 57.0
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 6.5e-53 211.5 190 58.4
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 1.4e-52 210.3 201 51.7
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.2e-52 209.1 194 54.1
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 4.2e-52 208.8 196 57.1
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 7.1e-52 208.0 189 59.8
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 9.3e-52 207.6 194 53.6
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 1.2e-51 207.2 205 54.1
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 3.5e-51 205.7 204 54.9
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 6.0e-51 204.9 173 63.0
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 1.3e-50 203.8 191 53.9
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 2.3e-50 203.0 196 54.1
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 3.0e-50 202.6 201 54.2
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 3.0e-50 202.6 188 54.3
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.9e-50 202.2 194 51.5
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.9e-50 202.2 174 56.3
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 6.7e-50 201.4 188 54.8
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.1e-49 200.7 198 52.5
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 1.5e-49 200.3 190 55.3
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 1.9e-49 199.9 195 51.8
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 3.3e-49 199.1 192 56.8
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 4.3e-49 198.7 173 61.3
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 5.7e-49 198.4 194 53.1
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 7.4e-49 198.0 186 58.1
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 9.6e-49 197.6 185 57.3
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 1.6e-48 196.8 205 52.2
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 1.6e-48 196.8 186 54.8
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 2.8e-48 196.1 194 54.1
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 6.2e-48 194.9 204 52.9
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 6.2e-48 194.9 188 53.2
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 1.1e-47 194.1 195 54.4
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 2.4e-47 193.0 195 53.8
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 2.4e-47 193.0 207 49.8
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 3.1e-47 192.6 191 51.8
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 5.3e-47 191.8 193 51.3
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 2.0e-46 189.9 198 49.5
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 4.5e-46 188.7 196 54.6
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 7.6e-46 188.0 193 52.3
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 1.0e-45 187.6 192 51.6
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 2.2e-45 186.4 189 51.3
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 2.2e-45 186.4 196 51.0
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 2.2e-45 186.4 202 50.0
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 6.3e-40 168.3 170 50.0
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.6e-38 162.9 213 45.5
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.3e-37 160.6 193 47.7
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 3.7e-32 142.5 211 42.7
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 7.7e-30 134.8 184 42.4
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.4e-28 130.6 204 37.3
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.9e-28 130.2 256 32.4
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.1e-27 126.7 273 30.8
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 7.4e-25 118.2 206 37.4
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.1e-23 112.5 197 37.1
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.0e-23 111.7 182 39.6
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.7e-22 108.2 187 35.8
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.8e-21 105.9 122 46.7
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.9e-20 103.6 170 39.4
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 8.0e-19 98.2 179 35.8
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 3.0e-18 96.3 86 51.2
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.6e-17 93.2 182 34.1
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 2.8e-16 89.7 96 51.0
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.4e-15 87.4 183 32.8
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.1e-15 85.9 171 31.6
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.6e-14 84.0 184 32.1
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-13 81.3 123 44.7
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-13 80.5 199 29.1
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-13 80.5 175 29.7
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 7.2e-12 75.1 80 56.2
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 2.1e-11 73.6 175 34.9
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 3.4e-09 66.2 126 31.7
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.7e-08 62.8 107 35.5
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 4.8e-08 62.4 94 38.3
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 4.8e-08 62.4 119 32.8
Manes.10G123525 Manihot esculenta HOM05D007512 ORTHO05D020513 7.7e-06 55.1 114 28.1


User provided reference genes

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