Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 3.7e-271 937.6 463 100.0
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 1.0e-191 673.7 459 69.5
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 1.8e-185 652.9 459 70.4
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 1.5e-179 633.3 461 65.9
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 2.6e-171 605.9 460 62.4
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 8.6e-167 590.9 455 61.5
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 8.6e-167 590.9 455 61.5
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 2.5e-166 589.3 458 60.5
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 1.2e-165 587.0 460 60.9
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 6.2e-165 584.7 459 60.3
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 3.1e-164 582.4 448 60.3
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 6.8e-164 581.3 460 60.7
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 8.9e-164 580.9 460 59.8
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 7.5e-163 577.8 459 61.2
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 2.2e-162 576.2 461 59.7
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 2.9e-162 575.9 460 59.1
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 1.1e-161 573.9 459 58.8
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 2.4e-161 572.8 459 60.6
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 5.4e-161 571.6 460 59.8
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 7.0e-161 571.2 460 60.0
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 1.2e-160 570.5 459 58.6
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 1.0e-159 567.4 462 58.9
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 2.3e-159 566.2 456 58.1
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 3.0e-159 565.8 455 58.7
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 5.0e-159 565.1 455 58.2
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 8.6e-159 564.3 455 58.2
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 1.5e-158 563.5 459 57.3
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 3.3e-158 562.4 459 58.6
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 7.3e-158 561.2 457 56.7
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 9.5e-158 560.8 458 58.7
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 2.1e-157 559.7 459 56.6
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 3.6e-157 558.9 459 56.4
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 8.1e-157 557.8 459 57.3
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 8.1e-157 557.8 459 56.6
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 1.1e-156 557.4 460 59.1
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 2.3e-156 556.2 460 57.4
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 2.3e-156 556.2 459 56.4
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 2.3e-156 556.2 460 58.0
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 3.1e-156 555.8 459 57.7
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 6.8e-156 554.7 460 58.7
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 8.9e-156 554.3 460 57.2
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 1.5e-155 553.5 460 57.0
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 2.9e-154 549.3 459 56.9
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea HOM05D002030 ORTHO05D007413 8.3e-154 547.7 466 56.4
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 8.3e-154 547.7 461 57.7
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 2.4e-153 546.2 461 56.8
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea HOM05D002030 ORTHO05D007413 5.4e-153 545.0 466 56.2
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 5.4e-153 545.0 463 57.2
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 7.1e-153 544.7 461 55.7
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 9.2e-153 544.3 462 58.2
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 7.8e-152 541.2 461 57.3
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 1.7e-151 540.0 462 57.8
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 1.7e-151 540.0 459 57.1
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 1.5e-150 537.0 450 55.8
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 2.5e-150 536.2 461 55.3
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 5.6e-150 535.0 455 57.8
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 5.6e-150 535.0 460 58.3
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 7.3e-150 534.6 459 56.9
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 8.1e-149 531.2 459 54.5
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 1.2e-147 527.3 455 54.9
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 2.6e-147 526.2 454 54.2
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 3.4e-147 525.8 458 56.6
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 6.4e-146 521.5 459 55.3
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 8.4e-146 521.2 455 54.3
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 4.1e-145 518.8 459 53.8
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 2.1e-144 516.5 460 53.9
Thhalv10027440m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 1.5e-142 510.4 461 55.3
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 5.6e-142 508.4 460 53.3
C03p22450 Brassica napus HOM05D002030 ORTHO05D007413 7.3e-142 508.1 453 55.6
BolC3t14628H Brassica oleracea HOM05D002030 ORTHO05D007413 1.6e-141 506.9 453 55.4
Aa31LG9G2740 Aethionema arabicum HOM05D002030 ORTHO05D007413 1.2e-139 500.7 458 54.1
CARHR220820 Cardamine hirsuta HOM05D002030 ORTHO05D007413 2.0e-139 500.0 461 54.0
BraA03t11180Z Brassica rapa HOM05D002030 ORTHO05D007413 3.4e-139 499.2 453 54.7
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 1.7e-138 496.9 462 54.1
A03p19250 Brassica napus HOM05D002030 ORTHO05D007413 2.2e-138 496.5 453 54.5
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 2.9e-138 496.1 460 53.5
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 3.8e-138 495.7 457 51.2
Thecc.09G250300 Theobroma cacao HOM05D002030 ORTHO05D007413 4.9e-138 495.4 385 60.8
Thhalv10017599m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 1.1e-137 494.2 461 52.7
AL7G41540 Arabidopsis lyrata HOM05D002030 ORTHO05D007413 2.4e-137 493.0 461 51.8
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 4.2e-137 492.3 455 52.7
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 1.6e-136 490.3 459 52.5
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 2.6e-131 473.0 461 51.4
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 9.9e-131 471.1 472 50.4
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 2.1e-128 463.4 461 50.8
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 4.6e-128 462.2 460 50.2
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 3.9e-127 459.1 343 62.1
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 5.1e-127 458.8 356 60.4
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 4.5e-123 445.7 352 58.8
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 1.8e-119 433.7 355 59.7
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 2.1e-117 426.8 452 45.8
BcaC08g44279 Brassica carinata HOM05D002030 ORTHO05D007413 8.1e-117 424.9 462 48.3
C06p16980 Brassica napus HOM05D002030 ORTHO05D007413 8.1e-117 424.9 462 48.3
RcHm_v2.0_Chr6g0255981 Rosa chinensis HOM05D002030 ORTHO05D007413 1.8e-116 423.7 352 56.8
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 1.9e-113 413.7 460 47.0
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 3.5e-112 409.5 447 46.3
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis HOM05D002030 ORTHO05D007413 1.1e-110 404.4 457 44.4
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 1.5e-110 404.1 459 44.7
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea HOM05D002030 ORTHO05D007413 5.0e-106 389.0 369 52.3
SMO141G0167 Selaginella moellendorffii HOM05D002030 ORTHO05D007413 1.4e-105 387.5 471 42.7
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 1.9e-105 387.1 299 58.2
GSVIVG01037252001 Vitis vinifera HOM05D002030 ORTHO05D007413 2.8e-101 373.2 459 44.2
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 1.1e-97 361.3 268 62.3
Eucgr.B03727 Eucalyptus grandis HOM05D002030 ORTHO05D007413 5.7e-94 349.0 449 41.9
CBR_g18996 Chara braunii HOM05D002030 ORTHO05D007413 1.8e-92 344.0 419 41.1
PSO478G2842 Papaver somniferum HOM05D002030 ORTHO05D007413 2.4e-92 343.6 363 49.3
Cc04_g16190 Coffea canephora HOM05D002030 ORTHO05D007413 6.5e-90 335.5 461 40.6
HanXRQChr14g0432371 Helianthus annuus HOM05D002030 ORTHO05D007413 3.9e-87 326.2 367 47.4
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 3.3e-78 296.6 320 45.6
CSS0011008 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 2.5e-73 280.4 257 54.9
Os11g0171400 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D007413 1.3e-66 258.1 258 48.1
BolC6t36898H Brassica oleracea HOM05D002030 ORTHO05D007413 6.1e-64 249.2 461 35.4
Sed0013906 Sechium edule HOM05D002030 ORTHO05D007413 2.0e-59 234.2 187 59.9
Nitab4.5_0001515g0060 Nicotiana tabacum HOM05D002030 ORTHO05D007413 6.6e-58 229.2 168 59.5
BcaC01g05780 Brassica carinata HOM05D002030 ORTHO05D007413 3.3e-57 226.9 210 52.9
Atru.chr1.1605 Acer truncatum HOM05D002030 ORTHO05D007413 1.7e-50 204.5 176 55.7
COL.COLO4_19604 Corchorus olitorius HOM05D002030 ORTHO05D007413 4.3e-49 199.9 196 52.0
FAN21G2573 Fragaria x ananassa HOM05D002030 ORTHO05D007413 2.5e-41 174.1 189 47.6
BcaC01g05781 Brassica carinata HOM05D002030 ORTHO05D007413 2.0e-38 164.5 118 65.3
DCAR_031630 Daucus carota HOM05D002030 ORTHO05D007413 3.5e-35 153.7 147 53.1
MD00G1154100 Malus domestica HOM05D002030 ORTHO05D007413 1.3e-34 151.8 121 54.5
Glyma.10G199232 Glycine max HOM05D002030 ORTHO05D007413 3.0e-26 124.0 146 44.5
Nitab4.5_0001515g0100 Nicotiana tabacum HOM05D002030 ORTHO05D007413 1.7e-18 98.2 63 68.3
Sc16g0005130 Simmondsia chinensis HOM05D002030 ORTHO05D007413 1.9e-12 78.2 66 50.0
Medtr4g132950 Medicago truncatula HOM05D002030 ORTHO05D007413 1.2e-11 75.5 80 42.5
DCAR_031631 Daucus carota HOM05D002030 ORTHO05D007413 5.1e-10 70.1 63 50.8
Solyc12g010650.1 Solanum lycopersicum HOM05D000161 ORTHO05D000111 2.0e-06 58.2 42 57.1


User provided reference genes

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