Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 0.0e+00 1555.8 885 100.0
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 5.7e-252 874.8 1074 53.8
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 2.1e-166 590.5 1251 39.4
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 2.5e-154 550.4 1230 36.3
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 1.7e-134 484.6 1072 37.9
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 3.5e-132 476.9 898 41.3
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 9.8e-119 432.2 428 59.3
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 8.0e-113 412.5 991 38.3
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 5.2e-112 409.8 1128 34.8
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 4.4e-111 406.8 1240 32.0
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 7.7e-108 396.0 1090 35.0
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 1.6e-105 388.3 703 43.1
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 2.9e-102 377.5 1094 34.1
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 4.1e-101 373.6 1078 34.4
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 2.7e-100 370.9 468 51.7
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 3.5e-100 370.5 468 50.6
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 3.0e-99 367.5 1251 31.3
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 3.0e-99 367.5 500 47.8
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 1.5e-98 365.2 429 51.3
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.5e-98 365.2 493 48.1
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.9e-98 364.8 425 51.8
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 9.5e-98 362.5 425 51.8
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 1.6e-97 361.7 428 52.6
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 4.7e-97 360.1 437 52.4
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 2.3e-96 357.8 422 52.6
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 1.5e-95 355.1 429 53.4
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 1.7e-94 351.7 437 51.7
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 2.7e-92 344.4 432 50.9
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 2.7e-92 344.4 1245 30.9
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 6.0e-92 343.2 443 49.4
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 3.9e-91 340.5 374 55.1
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 5.0e-91 340.1 416 52.4
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 5.0e-91 340.1 461 48.2
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.5e-90 338.6 431 50.1
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 4.3e-90 337.0 461 47.7
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 4.3e-90 337.0 1251 31.8
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 8.1e-89 332.8 410 48.3
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 1.8e-88 331.6 1159 31.1
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 1.5e-87 328.6 1187 30.7
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.5e-87 328.6 1265 31.0
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.5e-87 328.6 1189 30.9
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 9.8e-87 325.9 1238 29.4
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 1.7e-86 325.1 410 47.6
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 3.7e-86 323.9 1196 31.0
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 8.3e-86 322.8 1130 31.5
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.1e-85 322.4 1264 31.0
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.1e-85 319.7 1261 30.7
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 1.2e-84 318.9 1262 30.7
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 1.6e-84 318.5 1151 31.4
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 2.7e-84 317.8 1205 29.7
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 3.5e-84 317.4 1261 29.9
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 7.8e-84 316.2 431 49.0
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 3.9e-83 313.9 421 48.7
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.4e-80 305.4 429 47.3
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 1.4e-80 305.4 1224 28.3
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.8e-80 305.1 423 47.0
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 2.3e-80 304.7 421 48.0
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 3.1e-80 304.3 416 46.9
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 4.0e-80 303.9 458 46.5
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 8.9e-80 302.8 413 49.4
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 1.5e-79 302.0 385 49.9
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 2.0e-79 301.6 1251 26.9
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 4.4e-79 300.4 1101 30.2
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 4.4e-79 300.4 419 48.2
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 4.9e-78 297.0 418 45.0
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.4e-77 295.4 357 50.4
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 7.1e-77 293.1 414 46.4
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 9.2e-77 292.7 479 44.1
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 9.2e-77 292.7 1171 28.7
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 1.6e-76 292.0 412 45.9
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.7e-76 291.2 561 41.9
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 2.3e-75 288.1 380 48.7
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.2e-73 282.3 490 40.4
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 4.7e-73 280.4 456 44.5
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 6.8e-72 276.6 1255 29.6
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.6e-71 274.6 429 45.2
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 2.6e-71 274.6 1294 27.4
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 4.4e-71 273.9 386 46.4
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 2.9e-70 271.2 1230 28.0
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 3.8e-70 270.8 406 44.8
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 4.9e-70 270.4 463 40.8
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 4.9e-70 270.4 547 41.7
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 1.4e-69 268.9 389 43.4
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 7.1e-69 266.5 402 45.5
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 9.3e-69 266.2 1254 26.2
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 1.2e-68 265.8 1092 27.5
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 1.1e-66 259.2 374 46.3
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 2.5e-66 258.1 444 42.3
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 6.9e-64 250.0 352 46.3
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 2.0e-63 248.4 347 46.7
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 2.6e-63 248.1 350 46.3
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 2.6e-63 248.1 350 46.3
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 2.6e-63 248.1 347 46.7
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 9.9e-63 246.1 1225 28.2
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 1.7e-62 245.4 442 42.3
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.2e-62 245.0 319 50.8
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 4.2e-61 240.7 286 51.0
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 9.3e-61 239.6 431 40.8
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.4e-58 229.9 1410 27.2
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.3e-54 219.2 497 36.2
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.4e-53 215.7 473 36.6
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 7.1e-53 213.4 219 59.8
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 8.1e-49 199.9 933 26.7
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 2.0e-47 195.3 275 47.6
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 4.6e-44 184.1 420 34.8
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.8e-43 182.2 1028 28.7
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 2.5e-42 178.3 194 54.1
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 4.8e-41 174.1 907 26.4
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 1.4e-40 172.6 390 36.7
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 1.2e-39 169.5 494 32.4
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 5.0e-38 164.1 482 32.6
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 8.5e-38 163.3 204 50.5
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 4.1e-32 144.4 378 32.8
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 5.3e-32 144.1 201 46.3
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 6.9e-32 143.7 194 45.9
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 3.4e-31 141.4 123 62.6
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 2.2e-30 138.7 132 58.3
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 1.6e-28 132.5 194 45.9
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 7.9e-28 130.2 120 55.0
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 1.3e-25 122.9 204 39.2
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 1.7e-25 122.5 979 24.9
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 1.4e-24 119.4 221 40.3
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 1.8e-24 119.0 220 39.1
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 2.4e-24 118.6 156 48.1
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 9.1e-24 116.7 169 42.0
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 3.8e-22 111.3 171 42.1
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.6e-20 105.9 188 38.8
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 2.1e-20 105.5 253 36.4
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 2.7e-20 105.1 176 38.6
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 6.7e-19 100.5 157 41.4
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.0e-18 99.0 99 55.6
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 9.7e-18 96.7 64 68.8
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.8e-16 92.4 128 48.4
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 4.1e-16 91.3 167 37.1
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 4.1e-16 91.3 126 50.0
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 1.5e-13 82.8 154 35.1
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 3.6e-12 78.2 72 52.8
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 8.8e-11 73.6 128 43.8
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 4.8e-09 67.8 193 32.6
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 3.1e-08 65.1 222 30.6
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 5.3e-08 64.3 74 52.7
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 3.5e-07 61.6 130 40.0
SHI11166 Sapria himalayana HOM05D004845 ORTHO05D005957 3.8e-06 58.2 41 65.9
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 6.5e-06 57.4 117 34.2


User provided reference genes

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