Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 4.5e-161 571.2 294 100.0
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 1.6e-78 297.0 211 74.4
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 1.5e-76 290.4 211 73.5
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 2.9e-75 286.2 212 71.7
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 1.8e-61 240.4 208 66.3
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 1.8e-61 240.4 213 62.4
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 5.3e-61 238.8 210 61.9
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 2.0e-60 236.9 208 63.9
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 2.9e-59 233.0 213 61.0
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 4.9e-59 232.3 196 65.3
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 4.2e-58 229.2 212 59.4
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 1.2e-57 227.6 214 61.2
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 1.6e-57 227.3 210 61.9
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 1.6e-57 227.3 210 63.3
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 2.1e-57 226.9 217 59.9
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 7.9e-57 224.9 213 57.3
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 1.0e-56 224.6 215 60.0
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 2.3e-56 223.4 194 64.4
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 2.3e-56 223.4 194 63.9
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 3.0e-56 223.0 216 58.8
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 5.1e-56 222.2 221 57.5
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 5.1e-56 222.2 194 63.4
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 8.7e-56 221.5 213 60.1
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 1.1e-55 221.1 210 57.1
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 1.5e-55 220.7 215 58.1
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 1.5e-55 220.7 216 58.3
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 1.9e-55 220.3 213 61.0
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 3.3e-55 219.5 226 58.8
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 3.3e-55 219.5 210 60.0
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 4.3e-55 219.2 214 57.9
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 5.6e-55 218.8 194 62.9
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 5.6e-55 218.8 210 60.0
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 9.6e-55 218.0 218 59.6
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 1.6e-54 217.2 213 60.1
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 1.6e-54 217.2 212 58.0
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 1.6e-54 217.2 211 58.8
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 1.6e-54 217.2 203 60.1
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 2.1e-54 216.9 212 58.5
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 2.1e-54 216.9 211 57.3
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 2.8e-54 216.5 216 57.4
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 3.6e-54 216.1 212 58.5
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 3.6e-54 216.1 212 58.5
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 3.6e-54 216.1 209 57.4
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 3.6e-54 216.1 213 57.7
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 3.6e-54 216.1 212 57.5
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 4.8e-54 215.7 199 61.3
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 4.8e-54 215.7 212 58.0
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 4.8e-54 215.7 212 58.0
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 8.1e-54 214.9 198 60.1
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 8.1e-54 214.9 217 57.1
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 1.1e-53 214.5 212 58.0
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 1.4e-53 214.2 214 58.9
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 1.4e-53 214.2 220 58.6
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 2.4e-53 213.4 212 57.1
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 3.1e-53 213.0 226 59.7
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 4.0e-53 212.6 210 56.2
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 4.0e-53 212.6 210 57.6
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 1.2e-52 211.1 124 82.3
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 2.0e-52 210.3 212 57.1
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.0e-52 210.3 198 60.1
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 2.0e-52 210.3 211 57.3
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 2.6e-52 209.9 199 59.8
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 2.6e-52 209.9 117 85.5
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 2.6e-52 209.9 239 51.5
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 4.5e-52 209.1 210 55.2
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 4.5e-52 209.1 231 53.7
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 4.5e-52 209.1 231 53.7
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 5.8e-52 208.8 223 55.6
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 7.6e-52 208.4 211 55.9
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 9.9e-52 208.0 212 55.7
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 9.9e-52 208.0 226 58.0
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.3e-51 207.6 220 55.5
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 1.3e-51 207.6 224 55.8
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 1.7e-51 207.2 221 55.2
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 1.7e-51 207.2 201 58.2
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 8.4e-51 204.9 216 53.7
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 1.1e-50 204.5 218 52.8
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 1.4e-50 204.1 236 53.4
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 4.2e-50 202.6 212 54.2
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 5.5e-50 202.2 209 55.5
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 5.5e-50 202.2 168 62.5
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 7.1e-50 201.8 214 53.7
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 1.2e-49 201.1 222 53.6
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 1.6e-49 200.7 254 49.6
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 1.6e-49 200.7 184 58.7
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 2.1e-49 200.3 118 77.1
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 2.7e-49 199.9 197 56.9
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 2.7e-49 199.9 183 60.7
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 4.6e-49 199.1 124 77.4
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 1.0e-48 198.0 222 53.2
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.3e-48 196.8 210 55.2
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 8.7e-48 194.9 222 52.3
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 1.1e-47 194.5 205 53.7
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 1.1e-47 194.5 215 54.0
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 2.5e-47 193.4 261 47.5
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 2.8e-46 189.9 205 52.7
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 2.8e-46 189.9 205 52.7
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 2.4e-45 186.8 214 51.9
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 3.1e-45 186.4 178 56.2
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 6.9e-45 185.3 187 50.3
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 1.2e-44 184.5 107 82.2
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 3.4e-44 183.0 118 72.0
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 3.4e-44 183.0 118 72.0
Nitab4.5_0007429g0020 Nicotiana tabacum HOM05D005904 ORTHO05D007074 1.2e-41 174.5 175 58.3
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 6.0e-41 172.2 113 71.7
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 6.7e-40 168.7 116 70.7
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 1.1e-39 167.9 176 51.1
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 9.6e-39 164.9 214 48.6
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 1.1e-37 161.4 213 48.8
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 4.1e-37 159.5 179 50.8
Haze_15945 Corylus avellana HOM05D005904 ORTHO05D007074 1.5e-36 157.5 196 48.5
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.4e-36 156.4 113 67.3
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 4.5e-36 156.0 200 47.0
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 4.2e-34 149.4 112 64.3
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 1.2e-33 147.9 114 60.5
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 3.6e-33 146.4 168 47.0
CARHR088470 Cardamine hirsuta HOM05D005904 ORTHO05D007074 3.0e-32 143.3 159 53.5
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 7.4e-31 138.7 114 53.5
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 1.4e-29 134.4 111 56.8
Ca_01193_v3 Cicer arietinum L. HOM05D005904 ORTHO05D007074 5.3e-29 132.5 71 84.5
FAN17G1021 Fragaria x ananassa HOM05D005904 ORTHO05D007074 2.0e-20 104.0 62 82.3
Atru.chr1.3683 Acer truncatum HOM05D005904 ORTHO05D007074 4.5e-20 102.8 139 51.8
PGR044G2333 Punica granatum HOM05D005904 ORTHO05D007074 7.7e-20 102.1 51 84.3
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 1.0e-19 101.7 62 82.3
CSS0026651 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 3.0e-16 90.1 54 79.6
CSS0024966 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 9.7e-15 85.1 134 44.0
Potri.003G038400 Populus trichocarpa HOM05D005904 ORTHO05D007074 9.7e-15 85.1 104 47.1
TPR.G6604 Trifolium pratense HOM05D005904 ORTHO05D007074 1.1e-13 81.6 53 79.2
MCO11G030 Micromonas commoda HOM05D005904 ORTHO05D007074 2.4e-13 80.5 201 32.3
SGA_v2.0_scaffold71G23779 Striga asiatica HOM05D005904 ORTHO05D007074 3.1e-13 80.1 180 36.7
Oeu002508.1 Olea europaea HOM05D004582 ORTHO05D005507 6.7e-08 62.4 36 75.0


User provided reference genes

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