Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 4.2e-161 571.2 278 100.0
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 9.5e-121 437.2 277 74.7
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 2.2e-117 426.0 277 72.6
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 2.8e-104 382.5 277 65.0
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 3.6e-104 382.1 277 65.0
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 4.7e-104 381.7 277 64.6
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 9.0e-103 377.5 277 64.6
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 9.0e-103 377.5 278 64.4
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 5.8e-102 374.8 277 65.0
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 5.8e-102 374.8 278 64.7
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 4.9e-101 371.7 278 64.4
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 1.1e-100 370.5 278 65.1
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 1.9e-100 369.8 281 63.3
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 1.9e-100 369.8 279 64.5
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 2.7e-99 365.9 277 63.2
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 1.3e-98 363.6 276 65.2
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 3.3e-97 359.0 234 70.5
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 7.3e-97 357.8 277 61.0
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 9.6e-97 357.5 280 60.7
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 5.3e-95 351.7 279 61.6
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 5.3e-95 351.7 277 60.6
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 4.9e-93 345.1 277 60.6
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 2.7e-91 339.3 277 58.8
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 3.5e-91 339.0 278 59.7
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 7.9e-91 337.8 372 48.9
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 7.9e-91 337.8 275 58.9
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 1.9e-89 333.2 276 57.6
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 9.6e-89 330.9 275 59.3
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 9.6e-89 330.9 274 59.5
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 1.6e-88 330.1 284 58.1
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.1e-88 329.7 275 58.9
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 3.7e-88 328.9 277 56.0
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 4.8e-88 328.6 283 58.0
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 6.2e-88 328.2 282 57.4
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 1.4e-87 327.0 278 58.3
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 2.4e-87 326.2 268 59.0
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 3.1e-87 325.9 279 58.1
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 4.0e-87 325.5 288 58.0
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 4.0e-87 325.5 278 57.6
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 5.3e-87 325.1 281 57.7
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 9.0e-87 324.3 276 55.4
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 1.2e-86 323.9 276 58.3
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 2.6e-86 322.8 277 57.0
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 5.8e-86 321.6 279 56.6
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 7.6e-86 321.2 276 57.2
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 2.2e-85 319.7 276 57.6
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 2.9e-85 319.3 276 56.5
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 8.4e-85 317.8 278 56.5
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 1.4e-84 317.0 274 55.5
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 4.2e-84 315.5 275 55.3
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 9.3e-84 314.3 274 54.0
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 9.3e-84 314.3 279 56.3
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 2.1e-83 313.2 280 56.1
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.1e-83 313.2 255 58.0
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 3.5e-83 312.4 278 55.4
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 3.5e-83 312.4 278 55.4
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 6.0e-83 311.6 299 51.5
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 6.0e-83 311.6 274 56.2
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 6.0e-83 311.6 276 56.9
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 7.9e-83 311.2 274 55.1
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 7.9e-83 311.2 275 55.6
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 1.8e-82 310.1 275 54.9
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 3.0e-82 309.3 276 56.2
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 3.0e-82 309.3 274 55.1
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 3.9e-82 308.9 275 54.9
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 5.1e-82 308.5 280 55.4
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 6.7e-82 308.1 274 55.8
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 6.7e-82 308.1 278 54.7
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 8.7e-82 307.8 306 50.0
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 8.7e-82 307.8 275 54.9
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 1.1e-81 307.4 280 53.6
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 5.6e-81 305.1 204 65.2
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 7.4e-81 304.7 273 56.0
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 1.6e-80 303.5 268 57.8
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 6.2e-80 301.6 273 54.9
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 6.9e-79 298.1 265 55.1
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 9.0e-79 297.7 350 45.7
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 4.5e-78 295.4 270 53.7
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 3.9e-74 282.3 283 53.4
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 5.7e-73 278.5 258 53.5
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 2.4e-71 273.1 243 55.6
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 3.1e-71 272.7 278 49.6
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 3.4e-70 269.2 497 34.4
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 5.9e-70 268.5 247 56.7
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 3.6e-67 259.2 206 58.3
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 7.9e-67 258.1 278 49.3
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 3.3e-65 252.7 279 44.4
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 5.7e-65 251.9 157 71.3
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 2.8e-64 249.6 257 52.9
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 7.0e-55 218.4 189 57.7
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 7.2e-52 208.4 211 44.5
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 1.3e-48 197.6 201 51.2
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 1.0e-45 188.0 183 54.1
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 1.3e-45 187.6 168 47.6
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 1.7e-45 187.2 248 39.1
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 5.0e-45 185.7 213 48.8
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 1.4e-42 177.6 234 36.3
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 2.0e-41 173.7 114 65.8
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 2.0e-38 163.7 195 47.2
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 2.7e-35 153.3 100 65.0
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 6.1e-27 125.6 70 77.1
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 1.5e-25 120.9 203 36.5
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 2.6e-25 120.2 146 47.3
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 1.7e-24 117.5 97 58.8
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 9.2e-23 111.7 75 64.0
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 5.9e-22 109.0 143 46.2
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 2.6e-17 93.6 68 52.9
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 7.3e-12 75.5 84 41.7
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 1.4e-10 71.2 46 60.9
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 2.7e-06 57.0 92 38.0


User provided reference genes

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