Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold458G51943 Striga asiatica HOM05D003291 ORTHO05D003923 7.9e-100 367.1 182 100.0
SalBow6G6854 Salvia bowleyana HOM05D003291 ORTHO05D003923 6.7e-83 310.8 181 86.7
Oeu043547.1 Olea europaea HOM05D003291 ORTHO05D003923 8.8e-83 310.5 182 86.3
Oeu006153.2 Olea europaea HOM05D003291 ORTHO05D003923 2.6e-82 308.9 181 87.3
Oeu009557.1 Olea europaea HOM05D003291 ORTHO05D003923 1.7e-81 306.2 181 86.2
SGA_v2.0_scaffold208G42005 Striga asiatica HOM05D003291 ORTHO05D003923 1.7e-81 306.2 181 84.0
Migut.C00602 Erythranthe guttata HOM05D003291 ORTHO05D003923 8.2e-81 303.9 181 85.6
SalBow6G1638 Salvia bowleyana HOM05D003291 ORTHO05D003923 1.1e-80 303.5 189 83.1
MSTRG.1333 Avicennia marina HOM05D003291 ORTHO05D003923 5.3e-80 301.2 180 83.9
SalBow4G1770 Salvia bowleyana HOM05D003291 ORTHO05D003923 4.5e-79 298.1 176 85.8
Dinv35983 Davidia involucrata HOM05D003291 ORTHO05D003923 4.7e-76 288.1 181 80.1
Peaxi162Scf00064g00220 Petunia axillaris HOM05D003291 ORTHO05D003923 6.1e-76 287.7 181 80.1
Nitab4.5_0011844g0020 Nicotiana tabacum HOM05D003291 ORTHO05D003923 1.0e-75 287.0 181 80.1
Cc10_g04020 Coffea canephora HOM05D003291 ORTHO05D003923 1.8e-75 286.2 179 78.8
DCAR_023940 Daucus carota HOM05D003291 ORTHO05D003923 1.8e-75 286.2 176 81.2
Solyc12g088920.2 Solanum lycopersicum HOM05D003291 ORTHO05D003923 1.8e-75 286.2 181 79.6
Sopen12g030820 Solanum pennellii HOM05D003291 ORTHO05D003923 1.8e-75 286.2 181 79.6
CAN.G1422.3 Capsicum annuum HOM05D003291 ORTHO05D003923 4.0e-75 285.0 181 78.5
Dinv08769 Davidia involucrata HOM05D003291 ORTHO05D003923 5.2e-75 284.6 181 79.0
Cfa018512 Carpinus fangiana HOM05D003291 ORTHO05D003923 1.2e-74 283.5 176 80.7
COL.COLO4_26461 Corchorus olitorius HOM05D003291 ORTHO05D003923 7.5e-74 280.8 181 79.0
DCAR_028414 Daucus carota HOM05D003291 ORTHO05D003923 1.3e-73 280.0 176 79.0
unitig_26.g9818 Utricularia gibba HOM05D003291 ORTHO05D003923 1.7e-73 279.6 181 78.5
Thecc.08G012800 Theobroma cacao HOM05D003291 ORTHO05D003923 3.7e-73 278.5 176 79.5
CAN.G371.46 Capsicum annuum HOM05D003291 ORTHO05D003923 4.8e-73 278.1 181 77.3
CiPaw.16G047600 Carya illinoinensis HOM05D003291 ORTHO05D003923 4.8e-73 278.1 176 80.1
Glyma.17G244600 Glycine max HOM05D003291 ORTHO05D003923 4.8e-73 278.1 176 80.1
Cpa.g.sc1124.3 Carica papaya HOM05D003291 ORTHO05D003923 8.3e-73 277.3 181 77.9
Nitab4.5_0000453g0160 Nicotiana tabacum HOM05D003291 ORTHO05D003923 8.3e-73 277.3 181 79.0
CSS0046933 Camellia sinensis var. sinensis HOM05D003291 ORTHO05D003923 1.1e-72 276.9 176 79.0
Lj4A52T42 Lonicera japonica HOM05D003291 ORTHO05D003923 1.1e-72 276.9 176 77.8
Manes.05G171000 Manihot esculenta HOM05D003291 ORTHO05D003923 1.4e-72 276.6 179 77.1
Peaxi162Scf00528g00823 Petunia axillaris HOM05D003291 ORTHO05D003923 1.4e-72 276.6 181 76.8
Glyma.14G080800 Glycine max HOM05D003291 ORTHO05D003923 1.8e-72 276.2 176 80.1
Duzib093G1598 Durio zibethinus HOM05D003291 ORTHO05D003923 2.4e-72 275.8 176 79.0
TPR.G13691 Trifolium pratense HOM05D003291 ORTHO05D003923 3.1e-72 275.4 176 79.0
TAR381G0638 Trochodendron aralioides HOM05D003291 ORTHO05D003923 3.1e-72 275.4 181 75.7
Actinidia38048 Actinidia chinensis HOM05D003291 ORTHO05D003923 4.1e-72 275.0 176 79.0
Hma1.2p1_0337F.1_g129290 Hydrangea macrophylla HOM05D003291 ORTHO05D003923 4.1e-72 275.0 179 77.7
Duzib116G0711 Durio zibethinus HOM05D003291 ORTHO05D003923 9.1e-72 273.9 181 77.9
Actinidia27513 Actinidia chinensis HOM05D003291 ORTHO05D003923 1.2e-71 273.5 176 78.4
Medtr1g020000 Medicago truncatula HOM05D003291 ORTHO05D003923 1.2e-71 273.5 176 78.4
Actinidia15259 Actinidia chinensis HOM05D003291 ORTHO05D003923 1.6e-71 273.1 176 77.8
Gohir.D06G014700 Gossypium hirsutum HOM05D003291 ORTHO05D003923 1.6e-71 273.1 181 76.8
RcHm_v2.0_Chr6g0307181 Rosa chinensis HOM05D003291 ORTHO05D003923 1.6e-71 273.1 176 78.4
TWI56G0991 Tripterygium wilfordii HOM05D003291 ORTHO05D003923 2.0e-71 272.7 181 76.8
VMungo0647G0987 Vigna mungo HOM05D003291 ORTHO05D003923 2.0e-71 272.7 176 78.4
Atru.chr13.635 Acer truncatum HOM05D003291 ORTHO05D003923 2.7e-71 272.3 177 77.4
Phvul.001G019800 Phaseolus vulgaris HOM05D003291 ORTHO05D003923 2.7e-71 272.3 176 78.4
QL02p005806 Quercus lobata HOM05D003291 ORTHO05D003923 2.7e-71 272.3 176 77.8
Sabra14G0024400 Salix brachista HOM05D003291 ORTHO05D003923 2.7e-71 272.3 179 75.4
Sc02g0006960 Simmondsia chinensis HOM05D003291 ORTHO05D003923 2.7e-71 272.3 181 75.1
Ca_13307_v3 Cicer arietinum L. HOM05D003291 ORTHO05D003923 3.5e-71 271.9 176 78.4
Gorai.010G017500 Gossypium raimondii HOM05D003291 ORTHO05D003923 3.5e-71 271.9 181 76.8
MD15G1086800 Malus domestica HOM05D003291 ORTHO05D003923 3.5e-71 271.9 176 76.7
Solyc04g079300.3 Solanum lycopersicum HOM05D003291 ORTHO05D003923 3.5e-71 271.9 181 75.1
Sopen04g032890 Solanum pennellii HOM05D003291 ORTHO05D003923 3.5e-71 271.9 181 75.1
EL10Ac1g01777 Beta vulgaris HOM05D003291 ORTHO05D003923 4.5e-71 271.6 181 75.1
CSS0020917 Camellia sinensis var. sinensis HOM05D003291 ORTHO05D003923 4.5e-71 271.6 176 77.3
CSS0029839 Camellia sinensis var. sinensis HOM05D003291 ORTHO05D003923 4.5e-71 271.6 176 77.3
Potri.014G034400 Populus trichocarpa HOM05D003291 ORTHO05D003923 4.5e-71 271.6 179 75.4
PGSC0003DMG400008030 Solanum tuberosum HOM05D003291 ORTHO05D003923 4.5e-71 271.6 181 75.1
Gohir.A06G016600 Gossypium hirsutum HOM05D003291 ORTHO05D003923 5.9e-71 271.2 175 78.3
AUR62039319 Chenopodium quinoa HOM05D003291 ORTHO05D003923 7.7e-71 270.8 181 75.1
Lj4C776G1 Lonicera japonica HOM05D003291 ORTHO05D003923 7.7e-71 270.8 176 78.4
Lj5g0021120 Lotus japonicus HOM05D003291 ORTHO05D003923 7.7e-71 270.8 176 76.7
Psat6g012080 Pisum sativum HOM05D003291 ORTHO05D003923 7.7e-71 270.8 176 77.3
AUR62022448 Chenopodium quinoa HOM05D003291 ORTHO05D003923 1.0e-70 270.4 181 74.6
MELO3C010890.2 Cucumis melo HOM05D003291 ORTHO05D003923 1.0e-70 270.4 176 76.7
Nn1g05846 Nelumbo nucifera HOM05D003291 ORTHO05D003923 1.3e-70 270.0 176 75.6
Nn5g30207 Nelumbo nucifera HOM05D003291 ORTHO05D003923 1.3e-70 270.0 176 77.3
CsaV3_2G028120 Cucumis sativus L. HOM05D003291 ORTHO05D003923 2.2e-70 269.2 176 76.1
CANSAT25G2224 Cannabis sativa HOM05D003291 ORTHO05D003923 2.9e-70 268.9 176 77.8
Gohir.A05G200600 Gossypium hirsutum HOM05D003291 ORTHO05D003923 2.9e-70 268.9 176 75.6
Gorai.009G209900 Gossypium raimondii HOM05D003291 ORTHO05D003923 2.9e-70 268.9 176 75.6
Ah.05g168860 Amaranthus hybridus HOM05D003291 ORTHO05D003923 5.0e-70 268.1 181 74.6
Gohir.D05G203800 Gossypium hirsutum HOM05D003291 ORTHO05D003923 6.5e-70 267.7 176 75.0
Sed0000864 Sechium edule HOM05D003291 ORTHO05D003923 8.5e-70 267.3 176 76.1
HanXRQChr10g0304011 Helianthus annuus HOM05D003291 ORTHO05D003923 1.1e-69 266.9 180 75.6
arahy.Tifrunner.gnm1.ann1.H8JSRB Arachis hypogaea HOM05D003291 ORTHO05D003923 2.5e-69 265.8 176 75.0
arahy.Tifrunner.gnm1.ann1.NP9S9N Arachis hypogaea HOM05D003291 ORTHO05D003923 2.5e-69 265.8 176 75.0
vmacro21555 Vaccinium macrocarpon HOM05D003291 ORTHO05D003923 3.2e-69 265.4 176 76.1
FvH4_2g34860 Fragaria vesca HOM05D003291 ORTHO05D003923 4.2e-69 265.0 176 76.7
PGR031G1546 Punica granatum HOM05D003291 ORTHO05D003923 4.2e-69 265.0 176 76.1
Haze_17564 Corylus avellana HOM05D003291 ORTHO05D003923 7.2e-69 264.2 209 67.9
MD00G1187500 Malus domestica HOM05D003291 ORTHO05D003923 7.2e-69 264.2 176 75.0
TAR625G0168 Trochodendron aralioides HOM05D003291 ORTHO05D003923 7.2e-69 264.2 176 75.6
ECA232G2639 Erigeron canadensis HOM05D003291 ORTHO05D003923 1.2e-68 263.5 180 75.0
ATR0709G069 Amborella trichopoda HOM05D003291 ORTHO05D003923 1.6e-68 263.1 181 75.1
Eucgr.F02708 Eucalyptus grandis HOM05D003291 ORTHO05D003923 1.6e-68 263.1 176 75.6
HanXRQChr16g0507451 Helianthus annuus HOM05D003291 ORTHO05D003923 2.1e-68 262.7 180 75.0
Lalb_Chr22g0355231 Lupinus albus HOM05D003291 ORTHO05D003923 2.7e-68 262.3 176 75.6
Rhsim06G0046900 Rhododendron simsii HOM05D003291 ORTHO05D003923 2.7e-68 262.3 176 75.0
HanXRQChr02g0056101 Helianthus annuus HOM05D003291 ORTHO05D003923 3.6e-68 261.9 180 74.4
MD08G1106200 Malus domestica HOM05D003291 ORTHO05D003923 3.6e-68 261.9 175 74.9
Hund17590 Selenicereus undatus HOM05D003291 ORTHO05D003923 4.7e-68 261.5 181 75.1
GSVIVG01009556001 Vitis vinifera HOM05D003291 ORTHO05D003923 4.7e-68 261.5 176 73.9
PSO210G0952 Papaver somniferum HOM05D003291 ORTHO05D003923 6.1e-68 261.2 169 75.7
Lsat_1_v5_gn_4_124081 Lactuca sativa HOM05D003291 ORTHO05D003923 8.0e-68 260.8 176 76.1
MBI03_g42553_MAGBIO Magnolia biondii HOM05D003291 ORTHO05D003923 8.0e-68 260.8 181 73.5
THA.LOC104806367 Tarenaya hassleriana HOM05D003291 ORTHO05D003923 1.0e-67 260.4 176 74.4
Ciclev10000140m.g Citrus clementina HOM05D003291 ORTHO05D003923 1.8e-67 259.6 177 74.0
Prupe.1G440500 Prunus persica HOM05D003291 ORTHO05D003923 1.8e-67 259.6 176 75.0
FAN15G0927 Fragaria x ananassa HOM05D003291 ORTHO05D003923 4.0e-67 258.5 176 75.0
FAN27G0136 Fragaria x ananassa HOM05D003291 ORTHO05D003923 4.0e-67 258.5 176 75.0
Lsat_1_v5_gn_6_113580 Lactuca sativa HOM05D003291 ORTHO05D003923 6.8e-67 257.7 180 73.3
Lalb_Chr14g0368841 Lupinus albus HOM05D003291 ORTHO05D003923 6.8e-67 257.7 176 76.1
PSO170G2235 Papaver somniferum HOM05D003291 ORTHO05D003923 6.8e-67 257.7 169 74.6
FAN20G0796 Fragaria x ananassa HOM05D003291 ORTHO05D003923 8.8e-67 257.3 176 74.4
AT4G11800 Arabidopsis thaliana HOM05D003291 ORTHO05D003923 1.5e-66 256.5 176 72.2
A03p53920 Brassica napus HOM05D003291 ORTHO05D003923 2.0e-66 256.1 176 72.7
BraA03t14461Z Brassica rapa HOM05D003291 ORTHO05D003923 2.0e-66 256.1 176 72.7
THA.LOC104813013 Tarenaya hassleriana HOM05D003291 ORTHO05D003923 2.0e-66 256.1 176 72.7
THA.LOC104814278 Tarenaya hassleriana HOM05D003291 ORTHO05D003923 2.0e-66 256.1 176 72.7
C07p52330 Brassica napus HOM05D003291 ORTHO05D003923 2.6e-66 255.8 176 72.2
ClCG08G015660 Citrullus lanatus HOM05D003291 ORTHO05D003923 2.6e-66 255.8 168 75.6
Carub.0007s1827 Capsella rubella HOM05D003291 ORTHO05D003923 3.4e-66 255.4 176 71.6
Os07g0106000 Oryza sativa ssp. japonica HOM05D003291 ORTHO05D003923 3.4e-66 255.4 181 72.9
Sp7g21090 Schrenkiella parvula HOM05D003291 ORTHO05D003923 3.4e-66 255.4 176 71.6
HPP92_016679 Vanilla planifolia HOM05D003291 ORTHO05D003923 3.4e-66 255.4 176 73.9
Carub.0006s3091 Capsella rubella HOM05D003291 ORTHO05D003923 4.4e-66 255.0 176 72.2
CARHR230060 Cardamine hirsuta HOM05D003291 ORTHO05D003923 4.4e-66 255.0 176 70.5
AT4G23000 Arabidopsis thaliana HOM05D003291 ORTHO05D003923 5.7e-66 254.6 176 71.0
AL7G30520 Arabidopsis lyrata HOM05D003291 ORTHO05D003923 7.5e-66 254.2 176 71.0
BolC7t45726H Brassica oleracea HOM05D003291 ORTHO05D003923 7.5e-66 254.2 176 72.2
CDE03G0102 Ceratophyllum demersum HOM05D003291 ORTHO05D003923 7.5e-66 254.2 176 72.7
ECA246G0633 Erigeron canadensis HOM05D003291 ORTHO05D003923 7.5e-66 254.2 180 72.2
Aqoxy6G01378 Aquilegia oxysepala HOM05D003291 ORTHO05D003923 1.3e-65 253.4 176 72.2
AL6G46510 Arabidopsis lyrata HOM05D003291 ORTHO05D003923 1.3e-65 253.4 176 71.0
Nitab4.5_0005301g0010 Nicotiana tabacum HOM05D003291 ORTHO05D003923 1.3e-65 253.4 226 60.6
Thhalv10024304m.g Eutrema salsugineum HOM05D003291 ORTHO05D003923 2.8e-65 252.3 176 72.2
CARHR254510 Cardamine hirsuta HOM05D003291 ORTHO05D003923 1.1e-64 250.4 176 71.0
Aqoxy5G01279 Aquilegia oxysepala HOM05D003291 ORTHO05D003923 1.4e-64 250.0 176 70.5
Zm00001eb298290 Zea mays HOM05D003291 ORTHO05D003923 1.8e-64 249.6 181 71.3
Sp6g05650 Schrenkiella parvula HOM05D003291 ORTHO05D003923 3.1e-64 248.8 176 69.9
SHI08307 Sapria himalayana HOM05D003291 ORTHO05D003923 5.4e-64 248.1 179 70.4
BcaB05g23806 Brassica carinata HOM05D003291 ORTHO05D003923 7.0e-64 247.7 176 69.3
A02p25980 Brassica napus HOM05D003291 ORTHO05D003923 9.2e-64 247.3 176 69.3
BraA02t07596Z Brassica rapa HOM05D003291 ORTHO05D003923 9.2e-64 247.3 176 69.3
Thhalv10028387m.g Eutrema salsugineum HOM05D003291 ORTHO05D003923 1.6e-63 246.5 176 69.9
BcaC03g16327 Brassica carinata HOM05D003291 ORTHO05D003923 2.0e-63 246.1 176 68.8
A09p27310 Brassica napus HOM05D003291 ORTHO05D003923 2.0e-63 246.1 176 69.3
C02p41460 Brassica napus HOM05D003291 ORTHO05D003923 2.0e-63 246.1 176 68.8
BolC2t10163H Brassica oleracea HOM05D003291 ORTHO05D003923 2.0e-63 246.1 176 68.8
HanXRQChr09g0267981 Helianthus annuus HOM05D003291 ORTHO05D003923 2.0e-63 246.1 172 70.9
C09p34640 Brassica napus HOM05D003291 ORTHO05D003923 2.7e-63 245.7 176 69.3
BolC9t56309H Brassica oleracea HOM05D003291 ORTHO05D003923 2.7e-63 245.7 176 69.3
BraA09t38297Z Brassica rapa HOM05D003291 ORTHO05D003923 2.7e-63 245.7 176 69.3
Sc02g0006950 Simmondsia chinensis HOM05D003291 ORTHO05D003923 2.7e-63 245.7 186 68.3
BcaB01g01679 Brassica carinata HOM05D003291 ORTHO05D003923 5.9e-63 244.6 176 68.8
HanXRQChr05g0152181 Helianthus annuus HOM05D003291 ORTHO05D003923 2.9e-62 242.3 174 69.0
Zm00001eb096290 Zea mays HOM05D003291 ORTHO05D003923 4.3e-61 238.4 171 69.6
Pp3c5_1910 Physcomitrium patens HOM05D003291 ORTHO05D003923 1.7e-57 226.5 181 63.0
Mapoly0020s0063 Marchantia polymorpha HOM05D003291 ORTHO05D003923 2.9e-57 225.7 183 63.9
SEGI_30325 Sequoiadendron giganteum HOM05D003291 ORTHO05D003923 1.1e-56 223.8 172 64.5
Aa31LG9G10630 Aethionema arabicum HOM05D003291 ORTHO05D003923 9.2e-56 220.7 176 64.8
SMO358G0100 Selaginella moellendorffii HOM05D003291 ORTHO05D003923 1.0e-54 217.2 175 60.6
AagrBONN_evm.TU.Sc2ySwM_368.1909 Anthoceros agrestis HOM05D003291 ORTHO05D003923 1.5e-53 213.4 176 61.9
Hma1.2p1_0260F.1_g104760 Hydrangea macrophylla HOM05D003291 ORTHO05D003923 2.8e-52 209.1 138 75.4
HanXRQChr09g0267941 Helianthus annuus HOM05D003291 ORTHO05D003923 1.0e-51 207.2 172 64.0
CiPaw.16G047500 Carya illinoinensis HOM05D003291 ORTHO05D003923 6.4e-49 198.0 187 57.8
Haze_17560 Corylus avellana HOM05D003291 ORTHO05D003923 3.2e-48 195.7 176 61.4
CBR_g767 Chara braunii HOM05D003291 ORTHO05D000048 1.6e-47 193.4 182 54.4
Eucgr.B02927 Eucalyptus grandis HOM05D003291 ORTHO05D003923 1.6e-47 193.4 212 52.4
Pp3c1_37890 Physcomitrium patens HOM05D003291 ORTHO05D003923 2.0e-47 193.0 177 57.6
Nitab4.5_0000068g0460 Nicotiana tabacum HOM05D003291 ORTHO05D003923 3.5e-47 192.2 181 58.6
AagrBONN_evm.TU.Sc2ySwM_228.3178 Anthoceros agrestis HOM05D003291 ORTHO05D003923 7.8e-47 191.0 173 59.5
Cfa018515 Carpinus fangiana HOM05D003291 ORTHO05D003923 7.3e-45 184.5 177 56.5
Eucgr.B02922 Eucalyptus grandis HOM05D003291 ORTHO05D003923 9.5e-45 184.1 122 73.8
Haze_17561 Corylus avellana HOM05D003291 ORTHO05D003923 2.8e-44 182.6 197 52.8
QL02p005748 Quercus lobata HOM05D003291 ORTHO05D003923 1.1e-43 180.6 180 56.1
CiPaw.16G049300 Carya illinoinensis HOM05D003291 ORTHO05D003923 2.4e-40 169.5 178 54.5
unitig_578.g16531 Utricularia gibba HOM05D003291 ORTHO05D003923 5.4e-40 168.3 115 77.4
CiPaw.16G047400 Carya illinoinensis HOM05D003291 ORTHO05D003923 1.3e-38 163.7 172 55.2
CiPaw.16G046700 Carya illinoinensis HOM05D003291 ORTHO05D003923 5.1e-30 135.2 120 59.2
Cre03.g150800 Chlamydomonas reinhardtii HOM05D003291 ORTHO05D003923 3.2e-24 115.9 109 55.0
Hma1.2p1_0114F.1_g055190 Hydrangea macrophylla HOM05D003291 ORTHO05D003923 2.4e-19 99.8 77 64.9
HanXRQChr02g0059141 Helianthus annuus HOM05D002478 ORTHO05D225200 1.9e-13 80.1 43 93.0
Cpa.g.c41437 Carica papaya HOM05D003291 ORTHO05D116668 6.7e-06 55.1 37 67.6
Eucgr.L01671 Eucalyptus grandis HOM05D003291 ORTHO05D003923 6.7e-06 55.1 34 76.5


User provided reference genes

Program Settings