Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 2.1e-163 578.9 293 100.0
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 1.2e-121 440.3 294 78.2
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 8.0e-110 401.0 291 72.9
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 3.3e-108 395.6 304 70.4
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 3.3e-108 395.6 304 70.4
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 1.2e-105 387.1 311 66.9
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 1.3e-104 383.6 290 70.7
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 4.2e-103 378.6 301 66.8
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 1.2e-102 377.1 294 66.7
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 3.6e-102 375.6 296 67.2
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 8.0e-102 374.4 294 66.3
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 3.0e-101 372.5 297 65.3
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 4.0e-101 372.1 304 64.8
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 5.2e-101 371.7 310 65.5
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 8.8e-101 370.9 295 66.8
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 1.5e-100 370.2 301 65.8
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 2.6e-100 369.4 295 66.4
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 3.4e-100 369.0 301 66.8
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 5.7e-100 368.2 304 64.5
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 5.7e-100 368.2 304 64.1
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 7.5e-100 367.9 309 64.4
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 1.7e-99 366.7 310 63.9
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 2.8e-99 365.9 292 66.4
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 3.7e-99 365.5 302 64.2
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 3.7e-99 365.5 298 65.1
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 2.4e-98 362.8 221 79.6
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 5.4e-98 361.7 307 62.2
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 7.0e-98 361.3 287 67.9
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 7.0e-98 361.3 287 67.9
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 7.0e-98 361.3 287 67.9
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.2e-97 360.5 287 67.9
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 2.0e-97 359.8 292 67.8
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 2.7e-97 359.4 308 62.0
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 1.0e-96 357.5 266 69.9
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 1.3e-96 357.1 275 67.3
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 2.9e-96 355.9 303 61.4
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 2.9e-96 355.9 242 74.4
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 5.0e-96 355.1 244 72.5
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 5.0e-96 355.1 239 72.4
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 8.6e-96 354.4 218 76.1
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.5e-95 353.6 314 62.1
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 2.5e-95 352.8 308 61.7
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 3.3e-95 352.4 293 64.5
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 4.2e-95 352.1 234 74.4
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 5.5e-95 351.7 300 63.3
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 9.5e-95 350.9 291 64.3
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 1.6e-94 350.1 296 63.2
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 1.6e-94 350.1 293 65.2
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 2.8e-94 349.4 310 61.6
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 3.6e-94 349.0 298 63.4
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 8.0e-94 347.8 228 74.6
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 1.0e-93 347.4 265 68.3
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 3.0e-93 345.9 306 62.7
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 3.0e-93 345.9 298 62.8
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 3.0e-93 345.9 301 63.1
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 4.0e-93 345.5 283 62.5
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 4.0e-93 345.5 296 62.5
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 5.2e-93 345.1 225 73.3
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 6.8e-93 344.7 247 70.9
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 8.9e-93 344.4 291 63.2
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 1.5e-92 343.6 225 75.1
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 1.5e-92 343.6 269 66.5
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 2.6e-92 342.8 319 59.9
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 7.5e-92 341.3 309 60.5
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 1.3e-91 340.5 294 63.3
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 1.3e-91 340.5 294 63.3
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 1.7e-91 340.1 306 58.5
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 1.7e-91 340.1 277 67.5
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 2.8e-91 339.3 222 74.8
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 2.8e-91 339.3 307 61.2
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 3.7e-91 339.0 291 62.5
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.4e-90 337.0 225 75.1
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 4.1e-90 335.5 249 69.1
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 4.1e-90 335.5 267 64.4
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 9.2e-90 334.3 290 62.4
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 9.2e-90 334.3 316 58.5
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 9.2e-90 334.3 253 66.4
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 1.2e-89 334.0 275 63.3
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 2.0e-89 333.2 233 70.4
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 2.0e-89 333.2 270 62.2
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.7e-88 330.1 195 81.5
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 2.3e-88 329.7 212 74.1
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 3.9e-88 328.9 242 65.3
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 7.3e-87 324.7 289 62.6
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 7.3e-87 324.7 272 61.8
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 9.5e-87 324.3 280 63.6
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 4.7e-86 322.0 217 70.5
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 1.9e-82 310.1 284 61.3
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 7.0e-82 308.1 300 58.7
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 1.2e-81 307.4 234 69.7
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 4.6e-73 278.9 217 59.9
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 1.5e-71 273.9 217 59.9
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 4.7e-70 268.9 202 69.3
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.2e-68 264.2 235 59.1
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 1.6e-65 253.8 213 56.8
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 3.3e-63 246.1 216 58.3
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 1.2e-57 227.6 157 69.4
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.7e-56 223.8 244 47.1
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 1.1e-53 214.5 226 46.0
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 1.1e-53 214.5 191 53.9
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 3.1e-53 213.0 174 61.5
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 1.5e-52 210.7 210 58.6
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 1.3e-51 207.6 214 55.6
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.2e-51 206.8 145 71.0
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 9.3e-50 201.4 161 66.5
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.1e-42 177.9 158 61.4
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 8.7e-40 168.3 132 62.9
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 2.5e-39 166.8 126 66.7
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 3.3e-39 166.4 113 70.8
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 7.9e-33 145.2 91 74.7
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.5e-31 140.2 77 88.3
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.5e-31 140.2 77 88.3
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 1.6e-22 110.9 150 46.7
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 9.4e-18 95.1 122 43.4
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 2.3e-16 90.5 226 28.3
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 3.8e-11 73.2 62 61.3
PRCOL_00004570 Prasinoderma coloniale HOM05D006384 ORTHO05D007917 3.0e-08 63.5 144 25.0
Zm00001eb333230 Zea mays HOM05D005250 ORTHO05D006342 3.0e-08 63.5 260 22.3
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 5.1e-08 62.8 56 53.6
MCO04G452 Micromonas commoda HOM05D006384 ORTHO05D007917 1.1e-07 61.6 237 22.4
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 2.0e-07 60.8 48 62.5
SMO236G0018 Selaginella moellendorffii HOM05D005250 ORTHO05D006342 7.4e-07 58.9 231 23.8
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 1.3e-06 58.2 65 47.7
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 2.2e-06 57.4 40 60.0


User provided reference genes

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