Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4519G54498 Striga asiatica HOM05D007142 ORTHO05D008983 1.3e-139 499.6 239 100.0
MSTRG.9125 Avicennia marina HOM05D007142 ORTHO05D008983 2.4e-104 382.5 243 77.0
SalBow4G2536 Salvia bowleyana HOM05D007142 ORTHO05D008983 2.4e-104 382.5 241 78.0
Migut.F01892 Erythranthe guttata HOM05D007142 ORTHO05D008983 3.8e-102 375.2 230 78.7
Sopen06g021290 Solanum pennellii HOM05D007142 ORTHO05D008983 5.0e-102 374.8 242 76.9
Solyc06g061090.3 Solanum lycopersicum HOM05D007142 ORTHO05D008983 6.5e-102 374.4 242 76.9
MD06G1031800 Malus domestica HOM05D007142 ORTHO05D008983 8.5e-102 374.0 233 77.3
Nitab4.5_0014378g0020 Nicotiana tabacum HOM05D007142 ORTHO05D008983 8.5e-102 374.0 219 82.2
Nitab4.5_0003100g0010 Nicotiana tabacum HOM05D007142 ORTHO05D008983 1.1e-101 373.6 218 83.0
CAN.G201.17 Capsicum annuum HOM05D007142 ORTHO05D008983 1.5e-101 373.2 243 75.7
Cc08_g02450 Coffea canephora HOM05D007142 ORTHO05D000161 2.5e-101 372.5 236 77.1
Dinv28934 Davidia involucrata HOM05D007142 ORTHO05D008983 2.5e-101 372.5 224 80.4
Actinidia25952 Actinidia chinensis HOM05D007142 ORTHO05D008983 9.4e-101 370.5 225 79.1
Duzib205G0350 Durio zibethinus HOM05D007142 ORTHO05D008983 2.7e-100 369.0 232 76.3
COL.COLO4_17070 Corchorus olitorius HOM05D007142 ORTHO05D008983 3.6e-100 368.6 231 76.6
Gorai.004G186600 Gossypium raimondii HOM05D007142 ORTHO05D008983 4.7e-100 368.2 214 81.8
TAR629G1364 Trochodendron aralioides HOM05D007142 ORTHO05D008983 6.1e-100 367.9 219 79.9
Gohir.D08G178400 Gossypium hirsutum HOM05D007142 ORTHO05D008983 8.0e-100 367.5 214 81.8
GSVIVG01013184001 Vitis vinifera HOM05D007142 ORTHO05D008983 1.0e-99 367.1 218 79.4
Eucgr.D02183 Eucalyptus grandis HOM05D007142 ORTHO05D008983 3.0e-99 365.5 214 79.4
Aqoxy3G02453 Aquilegia oxysepala HOM05D007142 ORTHO05D008983 4.0e-99 365.2 223 78.5
Haze_08264 Corylus avellana HOM05D007142 ORTHO05D008983 4.0e-99 365.2 229 76.0
Thecc.03G230800 Theobroma cacao HOM05D007142 ORTHO05D008983 4.0e-99 365.2 231 74.9
FvH4_5g21680 Fragaria vesca HOM05D007142 ORTHO05D008983 6.7e-99 364.4 234 74.4
RcHm_v2.0_Chr7g0209181 Rosa chinensis HOM05D007142 ORTHO05D008983 8.8e-99 364.0 234 74.4
Atru.chr6.1752 Acer truncatum HOM05D007142 ORTHO05D008983 1.2e-98 363.6 220 79.5
FAN08G2513 Fragaria x ananassa HOM05D007142 ORTHO05D008983 1.5e-98 363.2 234 73.9
Potri.003G089900 Populus trichocarpa HOM05D007142 ORTHO05D008983 1.5e-98 363.2 219 78.1
QL12p006204 Quercus lobata HOM05D007142 ORTHO05D008983 1.5e-98 363.2 214 79.9
FAN18G0559 Fragaria x ananassa HOM05D007142 ORTHO05D008983 2.0e-98 362.8 234 74.8
Sabra03G0059800 Salix brachista HOM05D007142 ORTHO05D008983 2.6e-98 362.5 242 72.7
PSO339G0102 Papaver somniferum HOM05D007142 ORTHO05D008983 3.3e-98 362.1 222 77.0
DCAR_032211 Daucus carota HOM05D007142 ORTHO05D008983 7.5e-98 360.9 216 78.7
TWI15G0113 Tripterygium wilfordii HOM05D007142 ORTHO05D008983 7.5e-98 360.9 215 80.0
Manes.17G016003 Manihot esculenta HOM05D007142 ORTHO05D008983 1.3e-97 360.1 215 79.5
ECA246G1460 Erigeron canadensis HOM05D007142 ORTHO05D008983 1.7e-97 359.8 212 80.2
Aa31LG2G13430 Aethionema arabicum HOM05D007142 ORTHO05D008983 3.7e-97 358.6 224 77.7
PSO384G0274 Papaver somniferum HOM05D007142 ORTHO05D008983 3.7e-97 358.6 222 76.1
Prupe.5G040300 Prunus persica HOM05D007142 ORTHO05D008983 3.7e-97 358.6 220 77.7
vmacro00342 Vaccinium macrocarpon HOM05D007142 ORTHO05D008983 3.7e-97 358.6 220 79.5
CiPaw.11G091400 Carya illinoinensis HOM05D007142 ORTHO05D008983 4.8e-97 358.2 215 79.5
ClCG10G001790 Citrullus lanatus HOM05D007142 ORTHO05D008983 4.8e-97 358.2 230 74.8
Ciclev10032530m.g Citrus clementina HOM05D007142 ORTHO05D008983 4.8e-97 358.2 221 77.8
Glyma.17G154151 Glycine max HOM05D007142 ORTHO05D008983 8.2e-97 357.5 215 78.6
Lalb_Chr09g0329501 Lupinus albus HOM05D007142 ORTHO05D008983 1.1e-96 357.1 231 74.9
Lsat_1_v5_gn_3_16621 Lactuca sativa HOM05D007142 ORTHO05D008983 1.8e-96 356.3 212 79.7
Sed0005643 Sechium edule HOM05D007142 ORTHO05D008983 3.1e-96 355.5 241 72.2
Lj4g0022330 Lotus japonicus HOM05D007142 ORTHO05D008983 4.1e-96 355.1 226 75.7
CsaV3_3G001880 Cucumis sativus L. HOM05D007142 ORTHO05D008983 7.0e-96 354.4 233 74.2
Medtr4g098620 Medicago truncatula HOM05D007142 ORTHO05D008983 1.2e-95 353.6 231 74.9
PGR031G3753 Punica granatum HOM05D007142 ORTHO05D008983 1.2e-95 353.6 214 79.0
C05p31960 Brassica napus HOM05D007142 ORTHO05D008983 2.0e-95 352.8 236 74.6
BolC5t31922H Brassica oleracea HOM05D007142 ORTHO05D008983 2.0e-95 352.8 236 74.6
Psat4g079200 Pisum sativum HOM05D007142 ORTHO05D008983 2.0e-95 352.8 227 75.3
A09p33690 Brassica napus HOM05D007142 ORTHO05D008983 2.7e-95 352.4 236 74.6
HanXRQChr17g0535721 Helianthus annuus HOM05D007142 ORTHO05D008983 3.5e-95 352.1 212 79.2
VMungo0251G3176 Vigna mungo HOM05D007142 ORTHO05D008983 4.5e-95 351.7 218 77.1
BcaC05g27290 Brassica carinata HOM05D007142 ORTHO05D008983 5.9e-95 351.3 236 74.6
Cpa.g.sc665.3 Carica papaya HOM05D007142 ORTHO05D008983 5.9e-95 351.3 243 71.2
AT1G32520 Arabidopsis thaliana HOM05D007142 ORTHO05D008983 1.3e-94 350.1 239 72.4
TPR.G28665 Trifolium pratense HOM05D007142 ORTHO05D008983 1.3e-94 350.1 225 74.7
BraA09t38918Z Brassica rapa HOM05D007142 ORTHO05D008983 1.7e-94 349.7 236 74.2
BcaB07g32947 Brassica carinata HOM05D007142 ORTHO05D008983 2.2e-94 349.4 223 75.3
Phvul.003G229700 Phaseolus vulgaris HOM05D007142 ORTHO05D008983 2.2e-94 349.4 218 76.6
EL10Ac5g12171 Beta vulgaris HOM05D007142 ORTHO05D008983 3.8e-94 348.6 228 71.9
CANSAT21G2079 Cannabis sativa HOM05D007142 ORTHO05D008983 3.8e-94 348.6 244 70.5
CARHR031970 Cardamine hirsuta HOM05D007142 ORTHO05D008983 3.8e-94 348.6 223 75.3
THA.LOC104807961 Tarenaya hassleriana HOM05D007142 ORTHO05D008983 3.8e-94 348.6 231 74.5
MELO3C013862.2 Cucumis melo HOM05D007142 ORTHO05D008983 5.0e-94 348.2 218 77.1
AL1G46770 Arabidopsis lyrata HOM05D007142 ORTHO05D008983 8.5e-94 347.4 223 75.8
Ah.12g054590 Amaranthus hybridus HOM05D007142 ORTHO05D008983 1.5e-93 346.7 229 72.1
arahy.Tifrunner.gnm1.ann1.J3YA34 Arachis hypogaea HOM05D007142 ORTHO05D008983 2.5e-93 345.9 218 75.2
CDE11G1210 Ceratophyllum demersum HOM05D007142 ORTHO05D008983 3.2e-93 345.5 226 73.0
Thhalv10008641m.g Eutrema salsugineum HOM05D007142 ORTHO05D008983 4.2e-93 345.1 237 73.0
ATR0049G055 Amborella trichopoda HOM05D007142 ORTHO05D008983 1.6e-92 343.2 218 77.1
Peaxi162Scf00603g00413 Petunia axillaris HOM05D007142 ORTHO05D008983 1.6e-92 343.2 218 77.1
Carub.0001s3093 Capsella rubella HOM05D007142 ORTHO05D008983 8.0e-92 340.9 215 74.9
AUR62018753 Chenopodium quinoa HOM05D007142 ORTHO05D008983 1.8e-91 339.7 229 70.7
Sc10g0005600 Simmondsia chinensis HOM05D007142 ORTHO05D008983 1.5e-90 336.7 216 75.9
HPP92_004467 Vanilla planifolia HOM05D007142 ORTHO05D008983 4.4e-90 335.1 241 68.5
HPP92_004488 Vanilla planifolia HOM05D007142 ORTHO05D008983 1.1e-88 330.5 241 67.6
PGSC0003DMG400002104 Solanum tuberosum HOM05D007142 ORTHO05D008983 3.1e-88 328.9 195 82.1
Lj2C242T12 Lonicera japonica HOM05D007142 ORTHO05D008983 8.6e-86 320.9 173 86.7
Zm00001eb090700 Zea mays HOM05D007142 ORTHO05D008983 8.6e-86 320.9 220 68.6
FAN04G2755 Fragaria x ananassa HOM05D007142 ORTHO05D008983 2.5e-85 319.3 235 68.9
Nn6g33627 Nelumbo nucifera HOM05D007142 ORTHO05D008983 1.2e-84 317.0 173 86.1
Rhsim11G0012900 Rhododendron simsii HOM05D007142 ORTHO05D008983 2.8e-84 315.8 179 84.4
Sp1g28380 Schrenkiella parvula HOM05D007142 ORTHO05D008983 3.6e-84 315.5 204 74.0
Mapoly0005s0008 Marchantia polymorpha HOM05D007142 ORTHO05D008983 6.1e-84 314.7 218 69.7
unitig_32.g11901 Utricularia gibba HOM05D007142 ORTHO05D008983 6.1e-84 314.7 240 67.5
AUR62007246 Chenopodium quinoa HOM05D007142 ORTHO05D008983 8.3e-81 304.3 200 72.5
AagrBONN_evm.TU.Sc2ySwM_362.655 Anthoceros agrestis HOM05D007142 ORTHO05D008983 7.8e-79 297.7 201 69.7
FAN13G1057 Fragaria x ananassa HOM05D007142 ORTHO05D008983 1.3e-78 297.0 202 71.8
MBI04_g22954_MAGBIO Magnolia biondii HOM05D007142 ORTHO05D008983 2.5e-77 292.7 171 81.9
SEGI_34411 Sequoiadendron giganteum HOM05D007142 ORTHO05D008983 3.3e-77 292.4 194 70.6
arahy.Tifrunner.gnm1.ann1.KYR2NU Arachis hypogaea HOM05D007142 ORTHO05D008983 2.0e-71 273.1 214 64.5
Gohir.A08G158100 Gossypium hirsutum HOM05D007142 ORTHO05D008983 1.1e-64 250.8 158 74.7
Os11g0220300 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 2.2e-49 199.9 162 60.5
PRCOL_00005169 Prasinoderma coloniale HOM05D007142 ORTHO05D008983 1.1e-45 187.6 191 51.8
SMO367G0110 Selaginella moellendorffii HOM05D007142 ORTHO05D008983 2.1e-44 183.3 126 69.8
MCO11G179 Micromonas commoda HOM05D007142 ORTHO05D008983 7.9e-31 138.3 189 42.9
Os07g0120051 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 4.5e-26 122.5 127 52.0
Hma1.2p1_0585F.1_g183620 Hydrangea macrophylla HOM05D007142 ORTHO05D008983 9.3e-24 114.8 62 88.7
Oeu029960.1 Olea europaea HOM05D007142 ORTHO05D008983 2.3e-22 110.2 62 85.5
Glyma.05G112900 Glycine max HOM05D007142 ORTHO05D008983 3.3e-21 106.3 173 40.5
Cre10.g446500 Chlamydomonas reinhardtii HOM05D007142 ORTHO05D008983 1.2e-18 97.8 175 36.0
Dinv25200 Davidia involucrata HOM05D007142 ORTHO05D008983 3.9e-14 82.8 54 77.8
Os06g0318400 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 2.0e-10 70.5 61 55.7
Os11g0275900 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 7.9e-07 58.5 43 72.1


User provided reference genes

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