Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 2.9e-94 348.6 181 100.0
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 1.3e-81 306.6 181 86.2
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 5.7e-74 281.2 178 80.3
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 1.0e-70 270.4 176 76.7
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 1.7e-70 269.6 178 76.4
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 8.5e-70 267.3 173 76.3
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 1.1e-69 266.9 181 75.7
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 5.5e-69 264.6 175 74.9
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 7.2e-69 264.2 174 75.3
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 9.4e-69 263.8 175 76.0
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.4e-67 260.0 180 72.8
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 8.8e-67 257.3 172 76.2
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 8.8e-67 257.3 189 70.9
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 8.8e-67 257.3 175 73.1
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 1.5e-66 256.5 171 75.4
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 2.6e-66 255.8 176 71.0
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 4.4e-66 255.0 170 75.3
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 4.8e-65 251.5 175 72.0
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 8.2e-65 250.8 212 64.6
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 8.2e-65 250.8 175 72.0
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 1.1e-64 250.4 171 71.9
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 1.1e-64 250.4 174 70.1
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 9.1e-64 247.3 174 70.1
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 1.6e-63 246.5 177 70.6
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 4.5e-63 245.0 175 69.7
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 5.9e-63 244.6 175 72.0
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 5.9e-63 244.6 170 71.8
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 7.7e-63 244.2 175 70.3
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 7.7e-63 244.2 175 70.9
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 7.7e-63 244.2 178 69.7
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.3e-62 243.4 174 69.5
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 1.3e-62 243.4 174 69.5
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 1.7e-62 243.0 173 70.5
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 1.7e-62 243.0 174 69.5
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 1.7e-62 243.0 174 71.3
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 2.2e-62 242.7 177 67.8
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 2.9e-62 242.3 175 68.0
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 3.8e-62 241.9 175 67.4
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 5.0e-62 241.5 177 68.4
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 3.2e-61 238.8 172 72.1
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 4.2e-61 238.4 172 69.2
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 4.2e-61 238.4 173 67.1
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 7.2e-61 237.7 176 67.0
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 9.4e-61 237.3 171 69.0
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 1.6e-60 236.5 171 69.6
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 2.7e-60 235.7 179 64.8
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 6.1e-60 234.6 189 64.6
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 6.1e-60 234.6 171 69.0
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 1.8e-59 233.0 168 68.5
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 2.3e-59 232.6 172 68.6
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 3.0e-59 232.3 172 68.0
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 4.0e-59 231.9 175 67.4
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 5.2e-59 231.5 174 64.9
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 5.2e-59 231.5 172 65.7
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 5.2e-59 231.5 176 64.8
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 6.7e-59 231.1 176 65.3
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 1.5e-58 229.9 176 65.3
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 2.0e-58 229.6 174 64.4
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 4.4e-58 228.4 176 64.2
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 4.4e-58 228.4 176 64.8
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 7.5e-58 227.6 172 66.3
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 7.5e-58 227.6 174 64.4
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 7.5e-58 227.6 165 70.3
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 9.7e-58 227.3 177 65.5
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 9.7e-58 227.3 177 65.5
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 9.7e-58 227.3 174 64.4
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 1.7e-57 226.5 169 65.7
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 3.7e-57 225.3 177 65.0
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 3.7e-57 225.3 177 65.0
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 3.7e-57 225.3 166 66.9
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 4.8e-57 224.9 169 66.3
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 3.1e-56 222.2 166 66.9
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 7.0e-56 221.1 169 64.5
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 2.7e-55 219.2 167 64.1
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 4.5e-55 218.4 169 65.1
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 2.9e-54 215.7 179 61.5
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 1.9e-53 213.0 176 59.7
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 1.6e-52 209.9 159 66.0
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 1.6e-52 209.9 137 74.5
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 4.7e-52 208.4 141 73.0
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 1.0e-51 207.2 166 65.7
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.0e-51 207.2 149 70.5
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 1.0e-51 207.2 250 49.6
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 1.4e-51 206.8 167 64.7
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 3.4e-50 202.2 140 71.4
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 1.7e-49 199.9 168 62.5
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 2.8e-49 199.1 140 72.1
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 5.4e-48 194.9 138 69.6
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 2.7e-47 192.6 170 55.3
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 7.7e-47 191.0 119 78.2
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 7.7e-47 191.0 172 56.4
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 4.2e-45 185.3 177 55.9
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 2.1e-44 183.0 117 77.8
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 2.8e-44 182.6 138 68.1
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 8.0e-44 181.0 135 68.1
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.8e-43 179.9 195 50.3
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 1.8e-40 169.9 169 50.3
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 1.8e-40 169.9 182 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 5.4e-40 168.3 169 48.5
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 1.1e-37 160.6 116 69.0
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 1.2e-36 157.1 140 61.4
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 6.8e-35 151.4 141 54.6
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 2.3e-30 136.3 172 41.3
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 9.5e-29 131.0 113 59.3
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 9.2e-24 114.4 86 65.1
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 7.1e-16 88.2 58 75.9
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 5.1e-14 82.0 147 32.7
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 9.6e-13 77.8 66 62.1
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.1e-12 76.6 43 79.1
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 2.1e-12 76.6 52 75.0
Medtr1g051110 Medicago truncatula HOM05D001420 ORTHO05D009292 9.3e-08 61.2 83 48.2
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 5.1e-06 55.5 96 44.8


User provided reference genes

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