Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 2.8e-59 231.9 130 100.0
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.9e-39 166.0 130 74.6
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.8e-37 159.5 130 72.3
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 4.9e-35 151.4 128 69.5
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 5.4e-34 147.9 159 58.5
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 3.5e-33 145.2 130 62.3
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 6.0e-33 144.4 110 73.6
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 1.3e-32 143.3 130 61.5
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.7e-32 142.9 130 64.6
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 2.3e-32 142.5 130 63.1
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 8.6e-32 140.6 130 62.3
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 2.5e-31 139.0 130 62.3
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 5.6e-31 137.9 130 64.6
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 1.2e-30 136.7 129 60.5
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 1.2e-30 136.7 129 60.5
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 4.7e-30 134.8 130 61.5
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 4.7e-30 134.8 130 62.3
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 6.2e-30 134.4 132 64.4
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 6.2e-30 134.4 130 61.5
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 1.4e-29 133.3 125 63.2
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 1.4e-29 133.3 132 64.4
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.4e-29 133.3 132 64.4
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 4.0e-29 131.7 130 57.7
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 6.8e-29 131.0 157 54.1
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 6.8e-29 131.0 109 67.9
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 1.5e-28 129.8 132 59.8
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 1.5e-28 129.8 129 65.1
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 3.4e-28 128.6 109 66.1
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 5.8e-28 127.9 136 58.1
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 5.8e-28 127.9 130 59.2
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 7.5e-28 127.5 134 59.7
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 7.5e-28 127.5 126 57.9
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 9.9e-28 127.1 133 57.9
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 9.9e-28 127.1 130 56.9
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.7e-27 126.3 136 56.6
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 2.2e-27 125.9 134 59.0
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 2.9e-27 125.6 130 56.9
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 3.7e-27 125.2 129 58.1
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 8.3e-27 124.0 135 57.8
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 3.2e-26 122.1 133 58.6
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 5.4e-26 121.3 135 55.6
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 7.1e-26 120.9 130 56.2
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 1.2e-25 120.2 135 56.3
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.1e-25 119.4 132 57.6
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.1e-25 119.4 128 53.9
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 2.7e-25 119.0 131 57.3
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 3.5e-25 118.6 131 58.0
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 3.5e-25 118.6 130 54.6
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 7.8e-25 117.5 111 61.3
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 7.8e-25 117.5 110 60.0
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 1.0e-24 117.1 114 57.9
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 1.3e-24 116.7 130 54.6
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.3e-24 116.7 106 65.1
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.3e-24 116.7 131 55.0
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.7e-24 116.3 134 56.7
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 2.3e-24 115.9 135 57.0
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 3.0e-24 115.5 129 54.3
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 3.0e-24 115.5 130 54.6
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 5.1e-24 114.8 131 57.3
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 5.1e-24 114.8 130 57.7
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 6.6e-24 114.4 155 51.6
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 6.6e-24 114.4 130 54.6
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 8.6e-24 114.0 130 50.0
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 8.6e-24 114.0 109 56.9
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 8.6e-24 114.0 131 54.2
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 1.1e-23 113.6 101 63.4
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 1.1e-23 113.6 130 50.8
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 1.1e-23 113.6 130 51.5
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 1.1e-23 113.6 130 51.5
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.5e-23 113.2 130 51.5
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 1.5e-23 113.2 130 53.8
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.9e-23 112.8 130 50.0
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.9e-23 112.8 130 50.0
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.9e-23 112.8 130 50.0
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 2.5e-23 112.5 130 52.3
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 2.5e-23 112.5 130 53.1
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 2.5e-23 112.5 136 56.6
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 4.3e-23 111.7 87 70.1
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 4.3e-23 111.7 110 59.1
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 5.6e-23 111.3 131 55.0
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 9.5e-23 110.5 106 56.6
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 1.2e-22 110.2 130 51.5
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 1.2e-22 110.2 130 49.2
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 1.2e-22 110.2 130 49.2
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 1.2e-22 110.2 84 71.4
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.2e-22 110.2 130 50.0
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 1.2e-22 110.2 78 75.6
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 3.6e-22 108.6 131 56.5
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 6.2e-22 107.8 109 58.7
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 1.8e-21 106.3 131 48.9
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.8e-21 106.3 131 54.2
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 5.2e-21 104.8 77 71.4
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 5.2e-21 104.8 77 71.4
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 2.0e-20 102.8 140 51.4
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 3.4e-20 102.1 131 50.4
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 4.4e-20 101.7 130 49.2
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.7e-19 99.8 94 56.4
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 2.2e-19 99.4 132 48.5
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 6.4e-19 97.8 130 47.7
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 7.8e-17 90.9 131 46.6
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 2.3e-16 89.4 129 44.2
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 6.6e-16 87.8 130 46.2
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 4.3e-15 85.1 130 45.4
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 4.3e-15 85.1 133 44.4
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 5.6e-15 84.7 88 53.4
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 1.8e-13 79.7 112 47.3
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 2.4e-13 79.3 70 55.7
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 4.9e-11 71.6 78 50.0
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 8.7e-08 60.8 121 40.5
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 7.3e-07 57.8 131 33.6
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 1.3e-06 57.0 96 45.8


User provided reference genes

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