Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 1.2e-91 339.7 158 100.0
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 1.8e-87 325.9 158 94.3
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 1.2e-83 313.2 158 89.9
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 7.6e-83 310.5 156 89.1
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 7.6e-83 310.5 156 89.1
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 7.2e-81 303.9 156 87.8
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 2.1e-80 302.4 158 86.1
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 3.7e-77 291.6 156 82.7
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 1.8e-76 289.3 156 84.6
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 5.3e-76 287.7 156 82.1
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 1.2e-75 286.6 156 82.1
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 1.5e-75 286.2 156 82.7
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 1.5e-75 286.2 155 80.0
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 2.0e-75 285.8 155 81.3
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 7.7e-75 283.9 155 81.3
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 2.9e-74 282.0 156 81.4
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 2.9e-74 282.0 158 79.1
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 5.0e-74 281.2 155 79.4
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 8.5e-74 280.4 158 79.1
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 8.5e-74 280.4 155 81.3
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 1.1e-73 280.0 155 80.0
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 1.4e-73 279.6 154 81.2
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 3.2e-73 278.5 154 81.2
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 3.2e-73 278.5 154 80.5
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 3.2e-73 278.5 154 80.5
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 3.2e-73 278.5 157 79.0
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 3.2e-73 278.5 155 79.4
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 3.2e-73 278.5 154 80.5
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 3.2e-73 278.5 154 81.2
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 4.2e-73 278.1 154 79.9
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 7.2e-73 277.3 157 79.6
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 9.4e-73 276.9 156 78.8
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 1.2e-72 276.6 154 79.2
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 1.2e-72 276.6 154 79.9
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 1.6e-72 276.2 155 78.1
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 2.1e-72 275.8 156 79.5
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 2.7e-72 275.4 154 79.9
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 2.7e-72 275.4 155 77.4
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 3.6e-72 275.0 154 79.9
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 3.6e-72 275.0 154 79.9
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 3.6e-72 275.0 155 78.1
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 4.6e-72 274.6 156 78.2
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 6.1e-72 274.2 157 78.3
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 7.9e-72 273.9 154 79.9
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 1.0e-71 273.5 159 76.7
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 1.8e-71 272.7 154 78.6
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 1.8e-71 272.7 154 78.6
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 1.8e-71 272.7 154 78.6
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 1.8e-71 272.7 156 75.6
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 2.3e-71 272.3 154 78.6
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 2.3e-71 272.3 154 79.9
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 2.3e-71 272.3 155 77.4
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 3.0e-71 271.9 156 76.3
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 3.9e-71 271.6 154 80.5
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 5.1e-71 271.2 156 78.2
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 5.1e-71 271.2 157 77.1
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 5.1e-71 271.2 153 77.8
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 8.8e-71 270.4 148 79.7
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 8.8e-71 270.4 156 75.0
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 2.0e-70 269.2 153 78.4
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 2.0e-70 269.2 153 78.4
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 2.5e-70 268.9 154 74.7
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 2.5e-70 268.9 156 80.8
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 3.3e-70 268.5 156 79.5
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 3.3e-70 268.5 156 76.9
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 5.7e-70 267.7 155 76.1
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 7.4e-70 267.3 156 74.4
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 9.7e-70 266.9 155 76.8
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 1.3e-69 266.5 154 75.3
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 1.3e-69 266.5 154 75.3
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 1.3e-69 266.5 156 77.6
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 1.7e-69 266.2 156 75.6
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 2.2e-69 265.8 154 75.3
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 2.8e-69 265.4 154 76.0
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 4.8e-69 264.6 155 76.1
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 1.1e-68 263.5 152 77.0
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 1.1e-68 263.5 153 75.8
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 1.1e-68 263.5 156 75.6
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 1.4e-68 263.1 155 73.5
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 3.1e-68 261.9 154 74.0
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.1e-68 261.9 156 74.4
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 3.1e-68 261.9 156 72.4
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 5.3e-68 261.2 152 74.3
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 1.2e-67 260.0 166 72.3
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 1.2e-67 260.0 156 73.1
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 1.0e-66 256.9 126 88.1
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 1.7e-66 256.1 128 85.9
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 6.5e-66 254.2 156 73.1
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 6.5e-66 254.2 154 76.0
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 1.1e-65 253.4 129 85.3
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.2e-64 250.0 163 71.8
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 4.7e-64 248.1 149 73.2
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 4.7e-64 248.1 149 75.2
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 1.4e-63 246.5 119 90.8
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 1.1e-62 243.4 248 51.2
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.3e-62 241.9 163 69.3
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 3.3e-62 241.9 155 70.3
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 1.7e-61 239.6 153 71.2
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 8.8e-55 217.2 122 81.1
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 4.4e-54 214.9 119 78.2
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 1.7e-53 213.0 157 65.0
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 6.3e-53 211.1 120 77.5
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 3.1e-52 208.8 119 79.0
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 7.0e-52 207.6 151 58.9
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 1.2e-51 206.8 152 59.2
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 7.7e-51 204.1 118 78.0
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 4.2e-49 198.4 124 72.6
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 4.2e-49 198.4 154 60.4
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 6.1e-48 194.5 114 78.1
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 2.6e-46 189.1 155 54.8
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 2.2e-45 186.0 96 83.3
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 4.8e-45 184.9 112 75.9
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-44 181.0 159 51.6
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 3.8e-42 175.3 106 73.6
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.8e-42 175.3 93 81.7
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 2.5e-41 172.6 100 77.0
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 1.8e-39 166.4 104 66.3
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 4.4e-38 161.8 93 78.5
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 9.8e-38 160.6 154 51.3
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 1.7e-34 149.8 82 81.7
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.5e-33 146.7 89 77.5
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 1.4e-23 113.6 71 74.6
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 5.4e-20 101.7 58 70.7
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 1.0e-18 97.4 46 84.8
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 1.1e-17 94.0 147 35.4
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 4.3e-17 92.0 111 44.1
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 1.7e-10 70.1 112 39.3
PRCOL_00004481 Prasinoderma coloniale HOM05D006359 ORTHO05D007871 2.1e-08 63.2 125 34.4
VMungo1383G0392 Vigna mungo HOM05D006359 ORTHO05D007871 7.6e-06 54.7 28 85.7


User provided reference genes

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