Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16881 Striga asiatica HOM05D007456 ORTHO05D009411 4.4e-71 273.1 134 100.0
MSTRG.26940 Avicennia marina HOM05D007456 ORTHO05D009411 4.2e-21 107.1 134 43.3
SalBow4G3145 Salvia bowleyana HOM05D007456 ORTHO05D009411 2.0e-18 98.2 124 46.0
Migut.F00108 Erythranthe guttata HOM05D007456 ORTHO05D009411 2.6e-18 97.8 123 48.8
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 8.5e-14 82.8 137 40.9
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 1.1e-13 82.4 137 40.9
Dinv11972 Davidia involucrata HOM05D007456 ORTHO05D009411 8.0e-12 76.3 60 63.3
Nn1g09307 Nelumbo nucifera HOM05D007456 ORTHO05D009411 3.9e-11 73.9 60 56.7
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 5.2e-11 73.6 60 60.0
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 3.3e-10 70.9 119 39.5
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 1.3e-09 68.9 84 41.7
FAN10G0306 Fragaria x ananassa HOM05D007456 ORTHO05D009411 2.2e-09 68.2 84 41.7
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 2.2e-09 68.2 60 55.0
FAN10G3274 Fragaria x ananassa HOM05D007456 ORTHO05D009411 3.7e-09 67.4 108 38.9
PGR142G2334 Punica granatum HOM05D007456 ORTHO05D009411 4.8e-09 67.0 60 53.3
Aqoxy3G00913 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 6.3e-09 66.6 109 40.4
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 1.8e-08 65.1 73 47.9
CAN.G128.20 Capsicum annuum HOM05D007456 ORTHO05D009411 2.4e-08 64.7 60 55.0
FvH4_7g33490 Fragaria vesca HOM05D007456 ORTHO05D009411 3.1e-08 64.3 84 41.7
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 3.1e-08 64.3 84 39.3
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 4.1e-08 63.9 60 55.0
AL7G45310 Arabidopsis lyrata HOM05D007456 ORTHO05D009411 5.3e-08 63.5 62 50.0
A04p10240 Brassica napus HOM05D007456 ORTHO05D009411 5.3e-08 63.5 62 50.0
BolC4t25953H Brassica oleracea HOM05D007456 ORTHO05D009411 5.3e-08 63.5 62 50.0
BraA04t16690Z Brassica rapa HOM05D007456 ORTHO05D009411 5.3e-08 63.5 62 50.0
Thhalv10004016m.g Eutrema salsugineum HOM05D007456 ORTHO05D009411 5.3e-08 63.5 61 50.8
BcaB06g27033 Brassica carinata HOM05D007456 ORTHO05D009411 7.0e-08 63.2 62 50.0
Hma1.2p1_0758F.1_g213530 Hydrangea macrophylla HOM05D007456 ORTHO05D009411 7.0e-08 63.2 60 53.3
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 7.0e-08 63.2 60 53.3
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 7.0e-08 63.2 60 53.3
Cc11_g03880 Coffea canephora HOM05D007456 ORTHO05D009411 9.1e-08 62.8 57 52.6
THA.LOC104823813 Tarenaya hassleriana HOM05D007456 ORTHO05D009411 9.1e-08 62.8 100 39.0
Actinidia08731 Actinidia chinensis HOM05D007456 ORTHO05D009411 1.2e-07 62.4 138 34.8
BcaC02g09523 Brassica carinata HOM05D007456 ORTHO05D009411 1.2e-07 62.4 62 50.0
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 1.2e-07 62.4 88 44.3
vmacro06487 Vaccinium macrocarpon HOM05D007456 ORTHO05D009411 1.2e-07 62.4 60 51.7
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 1.6e-07 62.0 60 53.3
Rhsim01G0125300 Rhododendron simsii HOM05D007456 ORTHO05D009411 3.5e-07 60.8 138 35.5
C04p43710 Brassica napus HOM05D007456 ORTHO05D009411 4.5e-07 60.5 62 48.4
Nitab4.5_0004532g0030 Nicotiana tabacum HOM05D007456 ORTHO05D009411 4.5e-07 60.5 60 50.0
Ah.07g203680 Amaranthus hybridus HOM05D007456 ORTHO05D009411 5.9e-07 60.1 62 46.8
HanXRQChr09g0260511 Helianthus annuus HOM05D007456 ORTHO05D009411 5.9e-07 60.1 60 51.7
Sp7g05790 Schrenkiella parvula HOM05D007456 ORTHO05D009411 7.7e-07 59.7 62 48.4
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 1.0e-06 59.3 60 46.7
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 1.0e-06 59.3 60 46.7
MBI13_g23885_MAGBIO Magnolia biondii HOM05D007456 ORTHO05D009411 1.0e-06 59.3 54 51.9
QL09p026466 Quercus lobata HOM05D007456 ORTHO05D009411 1.0e-06 59.3 134 34.3
QL09p026540 Quercus lobata HOM05D007456 ORTHO05D009411 1.0e-06 59.3 134 34.3
Lsat_1_v5_gn_4_134121 Lactuca sativa HOM05D007456 ORTHO05D009411 1.3e-06 58.9 60 50.0
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 1.7e-06 58.5 60 46.7
EL10Ac3g05110 Beta vulgaris HOM05D007456 ORTHO05D009411 2.9e-06 57.8 62 43.5


User provided reference genes

Program Settings