Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16841 Striga asiatica HOM05D000375 ORTHO05D025956 1.6e-163 579.3 281 100.0
SGA_v2.0_scaffold18G08458 Striga asiatica HOM05D000375 ORTHO05D000240 2.5e-60 236.5 421 42.5
MSTRG.26986 Avicennia marina HOM05D000375 ORTHO05D000240 4.1e-31 139.4 263 41.4
SalBow6G6588 Salvia bowleyana HOM05D000375 ORTHO05D000240 3.3e-28 129.8 245 40.0
SGA_v2.0_scaffold90G27649 Striga asiatica HOM05D000375 ORTHO05D025956 2.8e-27 126.7 94 72.3
Nitab4.5_0006389g0010 Nicotiana tabacum HOM05D000375 ORTHO05D000240 3.0e-21 106.7 143 44.8
Sopen03g022150 Solanum pennellii HOM05D000375 ORTHO05D000240 1.5e-20 104.4 142 45.8
Solyc03g082430.1 Solanum lycopersicum HOM05D000375 ORTHO05D000240 2.5e-20 103.6 142 45.8
CAN.G303.7 Capsicum annuum HOM05D000375 ORTHO05D000240 3.3e-20 103.2 132 49.2
Peaxi162Scf00300g00828 Petunia axillaris HOM05D000375 ORTHO05D000240 3.3e-20 103.2 142 46.5
PGSC0003DMG400003220 Solanum tuberosum HOM05D000375 ORTHO05D000240 6.2e-19 99.0 146 44.5
Oeu049604.1 Olea europaea HOM05D000375 ORTHO05D000240 3.1e-18 96.7 197 42.1
Migut.F00160 Erythranthe guttata HOM05D000375 ORTHO05D000240 1.5e-17 94.4 210 38.1
Nitab4.5_0000319g0230 Nicotiana tabacum HOM05D000375 ORTHO05D000240 2.6e-17 93.6 143 43.4
Oeu055177.1 Olea europaea HOM05D000375 ORTHO05D000240 2.4e-15 87.0 142 43.0
Oeu021659.1 Olea europaea HOM05D000375 ORTHO05D000240 5.4e-15 85.9 146 42.5
Cc02_g00930 Coffea canephora HOM05D000375 ORTHO05D000240 6.0e-14 82.4 109 50.5
unitig_748.g7280 Utricularia gibba HOM05D057192 ORTHO05D025956 6.7e-13 79.0 131 44.3
Hma1.2p1_0094F.1_g047260 Hydrangea macrophylla HOM05D000375 ORTHO05D000240 7.4e-12 75.5 202 36.1
vmacro06429 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 7.4e-12 75.5 156 36.5
Oeu037968.1 Olea europaea HOM05D000375 ORTHO05D025956 9.6e-12 75.1 130 41.5
Dinv35375 Davidia involucrata HOM05D000375 ORTHO05D000240 8.1e-11 72.0 148 37.8
DCAR_008970 Daucus carota HOM05D000375 ORTHO05D000240 9.0e-10 68.6 135 39.3
SalBow2G3136 Salvia bowleyana HOM05D000375 ORTHO05D000240 1.2e-09 68.2 92 47.8
Rhsim03G0214300 Rhododendron simsii HOM05D000375 ORTHO05D000240 9.9e-09 65.1 162 34.6
RcHm_v2.0_Chr1g0382681 Rosa chinensis HOM05D000375 ORTHO05D000240 6.4e-08 62.4 154 37.0
unitig_0.g2446 Utricularia gibba HOM05D000375 ORTHO05D000240 6.4e-08 62.4 51 62.7
CANSAT21G1117 Cannabis sativa HOM05D000375 ORTHO05D000240 4.2e-07 59.7 159 32.1
DCAR_020360 Daucus carota HOM05D000375 ORTHO05D000240 2.1e-06 57.4 144 36.8
Potri.012G022600 Populus trichocarpa HOM05D000375 ORTHO05D000240 2.1e-06 57.4 169 34.9
GSVIVG01038629001 Vitis vinifera HOM05D000375 ORTHO05D000240 2.7e-06 57.0 149 30.9
Prupe.2G317500 Prunus persica HOM05D000375 ORTHO05D000240 3.5e-06 56.6 196 29.1
FAN03G1345 Fragaria x ananassa HOM05D000375 ORTHO05D000240 4.6e-06 56.2 263 30.0
FAN03G1521 Fragaria x ananassa HOM05D000375 ORTHO05D000240 4.6e-06 56.2 263 30.0
FAN03G2868 Fragaria x ananassa HOM05D000375 ORTHO05D000240 4.6e-06 56.2 263 30.0
unitig_0.g2628 Utricularia gibba HOM05D057192 ORTHO05D025956 4.6e-06 56.2 66 50.0
Ciclev10019529m.g Citrus clementina HOM05D000375 ORTHO05D000240 6.0e-06 55.8 204 29.4
Migut.F00995 Erythranthe guttata HOM05D000375 ORTHO05D000240 6.0e-06 55.8 173 34.1
FvH4_7g32780 Fragaria vesca HOM05D000375 ORTHO05D000240 7.9e-06 55.5 279 28.3
Lsat_1_v5_gn_2_135541 Lactuca sativa HOM05D000375 ORTHO05D000240 7.9e-06 55.5 72 51.4


User provided reference genes

Program Settings